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    LOC103063473 zinc finger protein 501-like [ Python bivittatus (Burmese python) ]

    Gene ID: 103063473, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC103063473
    Gene description
    zinc finger protein 501-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Python bivittatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
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    Genomic context

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    See LOC103063473 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006541989.1 (8494..16515, complement)

    NW_006541989.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_006541989 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 501-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Genomic

    1. NW_006541989.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

      Range
      8494..16515 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_007444627.3 → XP_007444689.2  zinc finger protein 501-like isoform X1

      UniProtKB/TrEMBL
      A0A9F2WJ71
      Conserved Domains (5) summary
      smart00349
      Location:21 → 86
      KRAB; krueppel associated box
      COG5048
      Location:126 → 351
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:361 → 381
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:21 → 60
      KRAB; KRAB box
      pfam13465
      Location:233 → 257
      zf-H2C2_2; Zinc-finger double domain

    2. XM_025177188.1 → XP_025032956.1  zinc finger protein 501-like isoform X2

      UniProtKB/TrEMBL
      A0A9F5JFP8
      Conserved Domains (2) summary
      COG5048
      Location:77 → 302
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:312 → 332
      ZF_C2H2; C2H2 Zn finger [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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