Protein Family Models

This entry represents the membrane spanning beta barrel domain of various Omp85 superfamily related proteins that have often have POTRA and Patatin domains. This family contains mainly flavobacterial proteins. (from Pfam)

Date:

2024-08-14

This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure. (from Pfam)

Date:

2024-08-14

This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers [2]. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [2]. Members of this family have been found also in vertebrates. [1]. 7808402. Solanum brevidens possesses a non-sucrose-inducible patatin. gene.. Banfalvi Z, Kostyal Z, Barta E;. Mol Gen Genet 1994;245:517-522.. [2]. 3371664. Molecular characterization of the patatin multigene family of. potato.. Mignery GA, Pikaard CS, Park WD;. Gene 1988;62:27-44. (from Pfam)

Date:

2024-08-14

The Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA from E. coli. [1]. 25101071. A comprehensive analysis of the Omp85/TpsB protein superfamily. structural diversity, taxonomic occurrence, and evolution.. Heinz E, Lithgow T;. Front Microbiol. 2014;5:370. (from Pfam)

Date:

2024-08-14

patatin-like phospholipase family protein containing an outer membrane protein assembly factor domain, may catalyze the cleavage of fatty acids from membrane lipids

Date:

2021-02-12