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Links from Protein

Items: 9

1.

integrase arm-type DNA-binding domain-containing protein

The domain found by this HMM, previously named DUF4102, is found often phage intergrases and predicted to bind arm-type integrase binding sites.

Date:
2024-08-14
Family Accession:
NF024750.5
Method:
HMM
2.

Phage integrase, N-terminal SAM-like domain

This domain is found in a variety of phage integrase proteins. (from Pfam)

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Biological Process:
DNA integration (GO:0015074)
Date:
2024-08-14
Family Accession:
NF026010.5
Method:
HMM
3.

tyrosine-type recombinase/integrase

Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase (Swiss:P06956) are Arg-173, His-289, Arg-292 and Tyr-324. [1]. 9082984. Flexibility in DNA recombination: structure of the lambda. integrase catalytic core.. Kwon HJ, Tirumalai R, Landy A, Ellenberger T;. Science 1997;276:126-131.. [2]. 9288963. Structure of Cre recombinase complexed with DNA in a. site-specific recombination synapse.. Guo F, Gopaul DN, van Duyne GD;. Nature 1997;389:40-46. (from Pfam)

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Biological Process:
DNA recombination (GO:0006310)
Biological Process:
DNA integration (GO:0015074)
Date:
2024-08-14
Family Accession:
NF012798.5
Method:
HMM
4.
new record, indexing in progress
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5.
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6.
new record, indexing in progress
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7.
new record, indexing in progress
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8.
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9.
new record, indexing in progress
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