Protein Family Models for Protein (Select 507077300) - Protein Family Models

Select item 4010321.

peptidoglycan binding domain-containing protein

This domain is found associated with the L,D-transpeptidase domain Pfam:PF03734. The structure of this domain has been solved and shows a mixed alpha-beta fold composed of nine beta strands and four alpha helices. This domain is usually found to be duplicated. Therefore, it seems likely that this domain acts to bind the two unlinked peptidoglycan chains and bring them into close association so they can be cross linked by the transpeptidase domain (Bateman A pers. observation). [1]. 16647082. Crystal structure of a novel beta-lactam-insensitive. peptidoglycan transpeptidase.. Biarrotte-Sorin S, Hugonnet JE, Delfosse V, Mainardi JL, Gutmann. L, Arthur M, Mayer C;. J Mol Biol. 2006;359:533-538. (from Pfam)

Date:: 2024-04-03

Family Accession:: NF023650.4
Method:: HMM

Select item 3957012.

G5 domain-containing protein

This domain is found in a wide range of extracellular proteins. It is found tandemly repeated in up to 8 copies. It is found in the N-terminus of peptidases belonging to the M26 family which cleave human IgA. The domain is also found in proteins involved in metabolism of bacterial cell walls suggesting this domain may have an adhesive function. [1]. 18992255. Crystal structure of the resuscitation-promoting factor. (DeltaDUF)RpfB from M. tuberculosis.. Ruggiero A, Tizzano B, Pedone E, Pedone C, Wilmanns M, Berisio. R;. J Mol Biol. 2009;385:153-162.. [2]. 15598841. The G5 domain: a potential N-acetylglucosamine recognition. domain involved in biofilm formation.. Bateman A, Holden MT, Yeats C;. Bioinformatics. 2005;21:1301-1303. (from Pfam)

Date:: 2024-04-03

Family Accession:: NF019142.4
Method:: HMM

Select item 3906973.

VanW family protein

Family members include vancomycin resistance protein W (VanW). Genes encoding members of this family have been found in vancomycin resistance gene clusters vanB [1] and vanG [2]. The function of VanW is unknown. [1]. 11376048. High prevalence of VanB2 vancomycin-resistant Enterococcus. faecium in Taiwan.. Lu JJ, Perng CL, Ho MF, Chiueh TS, Lee WH;. J Clin Microbiol 2001;39:2140-2145.. [2]. 11036060. Genetic characterization of vanG, a novel vancomycin resistance. locus of Enterococcus faecalis.. McKessar SJ, Berry AM, Bell JM, Turnidge JD, Paton JC;. Antimicrob Agents Chemother 2000;44:3224-3228. (from Pfam)

Date:: 2024-04-03

Family Accession:: NF016202.4
Method:: HMM

Select item 3555464.

new record, indexing in progress

Family Accession:

Select item 3538535.

new record, indexing in progress

Family Accession:

Select item 3501036.

new record, indexing in progress

Family Accession:

Select item 3265547.

new record, indexing in progress

Family Accession:

Select item 3219708.

new record, indexing in progress

Family Accession:

Select item 3193209.

new record, indexing in progress

Family Accession:

Select item 16450610.

new record, indexing in progress

Family Accession:

Select item 16430011.

new record, indexing in progress

Family Accession:

Select item 12980012.

new record, indexing in progress

Family Accession:

Select item 12911213.

new record, indexing in progress

Family Accession:

Select item 8174314.

PG_binding_4 and VanW domain-containing protein

Date:: 2019-03-21

Family Accession:: 13100280
Method:: Sparcle

Select item 1132915.

new record, indexing in progress

Family Accession:

Select item 1102316.

new record, indexing in progress

Family Accession:

Protein Family Models

Protein Family

Send to:

Links from Protein

Items: 16

Send to:

Supplemental Content

Find related data

Recent activity