Protein Family Models for Protein (Select 497557206) - Protein Family Models

Select item 4141681.

Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

This domain is found in a range of enzymes that act on branched substrates - isoamylase, pullulanase and branching enzyme. This family also contains the beta subunit of 5' AMP activated kinase. [1]. 9719642. Three-dimensional structure of Pseudomonas isoamylase at 2.2 A. resolution.. Katsuya Y, Mezaki Y, Kubota M, Matsuura Y;. J Mol Biol 1998;281:885-897.. [2]. 14673168. Mutations in the gal83 glycogen-binding domain activate the. snf1/gal83 kinase pathway by a glycogen-independent mechanism.. Wiatrowski HA, Van Denderen BJ, Berkey CD, Kemp BE, Stapleton D,. Carlson M;. Mol Cell Biol 2004;24:352-361.. [3]. 12747837. AMPK beta subunit targets metabolic stress sensing to glycogen.. Polekhina G, Gupta A, Michell BJ, van Denderen B, Murthy S, Feil. SC, Jennings IG, Campbell DJ, Witters LA, Parker MW, Kemp BE,. Stapleton D;. Curr Biol 2003;13:867-871.. [4]. 12747836. A novel domain in AMP-activated protein kinase causes glycogen. storage bodies similar to those seen in hereditary cardiac. arrhythmias.. Hudson ER, Pan DA, James J, Lucocq JM, Hawley SA, Green KA, Baba. O, Terashima T, Hardie DG;. Curr Biol 2003;13:861-866. (from Pfam)

GO Terms:

Molecular Function:: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553)

Biological Process:: carbohydrate metabolic process (GO:0005975)

Date:: 2024-08-14

Family Accession:: NF014919.5
Method:: HMM

Select item 4111952.

alpha-amylase family glycosyl hydrolase

Alpha amylase is classified as family 13 of the glycosyl hydrolases. The structure is an 8 stranded alpha/beta barrel containing the active site, interrupted by a ~70 a.a. calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain. [1]. 8107092. Refined molecular structure of pig pancreatic alpha-amylase at. 2.1 A resolution.. Larson SB, Greenwood A, Cascio D, Day J, McPherson A;. J Mol Biol 1994;235:1560-1584.. [2]. 9600843. Crystal structure of yellow meal worm alpha-amylase at 1.64 A. resolution.. Strobl S, Maskos K, Betz M, Wiegand G, Huber R, Gomis-Ruth FX,. Glockshuber R;. J Mol Biol 1998;278:617-628. (from Pfam)

GO Terms:

Molecular Function:: catalytic activity (GO:0003824)

Biological Process:: carbohydrate metabolic process (GO:0005975)

Date:: 2024-08-14

Family Accession:: NF012356.5
Method:: HMM

Select item 3915523.

new record, indexing in progress

Family Accession:

Select item 3881894.

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Family Accession:

Select item 3494835.

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Family Accession:

Select item 3480986.

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Family Accession:

Select item 3174797.

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Family Accession:

Select item 3166808.

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Family Accession:

Select item 2357299.

glycogen debranching protein

glycogen debranching protein (GlgX) hydrolyzes (1->6)-alpha-D-glucosidic branch linkages in glycogen, amylopectin, and their beta-limit dextrins

Date:: 2024-08-21

Family Accession:: 11445913
Method:: Sparcle

Select item 3953610.

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Family Accession:

Select item 3863011.

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Family Accession:

Select item 569912.

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Family Accession:

Select item 478213.

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