Protein Family Models for Protein (Select 1914476310) - Protein Family Models

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Items: 7

Select item 4271331.

This entry represents a wide variety of bacterial Ig domains. [1]. 21606337. Structure of a bacterial cell surface decaheme electron conduit.. Clarke TA, Edwards MJ, Gates AJ, Hall A, White GF, Bradley J,. Reardon CL, Shi L, Beliaev AS, Marshall MJ, Wang Z, Watmough NJ,. Fredrickson JK, Zachara JM, Butt JN, Richardson DJ;. Proc Natl Acad Sci U S A. 2011;108:9384-9389. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF037016.5
Method:: HMM

Select item 4259402.

Bacterial cadherin-like domain

This entry contains numerous bacterial cadherin-like domains found in extracelullar proteins. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF036814.5
Method:: HMM

Select item 4047663.

new record, indexing in progress

Family Accession:

Select item 4042224.

new record, indexing in progress

Family Accession:

Select item 3607155.

new record, indexing in progress

Family Accession:

Select item 3605176.

new record, indexing in progress

Family Accession:

Select item 1428767.

VCBS domain-containing protein

This domain of about 100 residues was found originally in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion. This HMM for a repeated domain overlaps substantially (shifted by half its length) with newer Pfam model PF17803 (bacterial cadherin-like domain).