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Links from Protein

Items: 4

1.

Rpn family recombination-promoting nuclease/putative transposase

This family of putative transposases includes the YhgA sequence from Escherichia coli (Swiss:P31667) and several prokaryotic homologues. (from Pfam)

Date:
2024-08-14
Family Accession:
NF016629.5
Method:
HMM
2.
new record, indexing in progress
Family Accession:
3.
new record, indexing in progress
Family Accession:
4.

Rpn family recombination-promoting nuclease/putative transposase

The Rpn (Recombination-Promoting Nuclease) family includes YhgA, YadD, YfaD, and YfcI from Escherichia coli K-12, but also several paralogous families in Treponema denticola that are well enough conserved to suggest the proteins are transposases. Characterization of YhgA found magnesium-dependent, calcium-stimulated DNA endonuclease activity that promotes DNA incorporation, but stopped short of classifying YhgA as a transposase.

Date:
2022-03-28
Family Accession:
TIGR01784.1
Method:
HMM
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