Protein Family Models for Protein (Select 1196376792) - Protein Family Models

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Select item 4233811.

This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. There is a Walker A and Walker B. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF024991.5
Method:: HMM

Select item 4230152.

AAA family ATPase

Date:: 2024-08-14

Family Accession:: NF024605.5
Method:: HMM

Select item 4226603.

AAA family ATPase

GO Terms:

Molecular Function:: ATP hydrolysis activity (GO:0016887)

Date:: 2024-08-14

Family Accession:: NF024793.5
Method:: HMM

Select item 4164594.

zeta toxin family protein

This family consists of several bacterial zeta toxin proteins. Zeta toxin is thought to be part of a postregulational killing system in bacteria. It relies on antitoxin/toxin systems that secure stable inheritance of low and medium copy number plasmids during cell division and kill cells that have lost the plasmid [1]. [1]. 12571357. Crystal structure of the plasmid maintenance system. epsilon/zeta: functional mechanism of toxin zeta and. inactivation by epsilon 2 zeta 2 complex formation.. Meinhart A, Alonso JC, Strater N, Saenger W;. Proc Natl Acad Sci U S A 2003;100:1661-1666. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Molecular Function:: kinase activity (GO:0016301)

Date:: 2024-08-14

Family Accession:: NF018154.5
Method:: HMM

Select item 4145465.

signal recognition particle receptor subunit alpha

GO Terms:

Molecular Function:: GTP binding (GO:0005525)

Biological Process:: SRP-dependent cotranslational protein targeting to membrane (GO:0006614)

Date:: 2024-08-14

Family Accession:: NF014880.5
Method:: HMM

Select item 4116486.

SRP54-type protein, GTPase domain

This family includes relatives of the G-domain of the SRP54 family of proteins. [1]. 9002525. Crystal structure of the NG domain from the signal-recognition. particle receptor FtsY.. Montoya G, Svensson C, Luirink J, Sinning I;. Nature 1997;385:365-368. (from Pfam)

GO Terms:

Molecular Function:: GTP binding (GO:0005525)

Biological Process:: SRP-dependent cotranslational protein targeting to membrane (GO:0006614)

Date:: 2024-08-14

Family Accession:: NF012662.5
Method:: HMM

Select item 4116217.

AAA family ATPase

AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. [1]. 7646486. A 200-amino acid ATPase module in search of a basic function.. Confalonieri F, Duguet M;. Bioessays 1995;17:639-650.. A large extension of the family. [2]. 9927482. AAA+: A class of chaperone-like ATPases associated with the. assembly, operation, and disassembly of protein complexes.. Neuwald AF, Aravind L, Spouge JL, Koonin EV;. Genome Res 1999;9:27-43. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Molecular Function:: ATP hydrolysis activity (GO:0016887)

Date:: 2024-08-14

Family Accession:: NF012234.5
Method:: HMM

Select item 3997928.