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Select item 70160311.

Metabolomics reveals impact of seven functional foods on metabolic pathways in a gut microbiota model

Mohamed A. Farag, Amr Abdelwareth, Ibrahim E. Sallam, Mohamed el Shorbagi, Nico Jehmlich, Katarina Fritz-Wallace, Stephanie Serena Schäpe, Ulrike Rolle-Kampczyk, Anja Ehrlich, Ludger A. Wessjohann, Martin von Bergen

J Adv Res. 2020 May; 23: 47–59. Published online 2020 Jan 3. doi: 10.1016/j.jare.2020.01.001

PMCID:: PMC7016031

Abstract Article PDF–2.1M

Select item 69840892.

The Role of Efflux Pumps and Environmental pH in Bacterial Multidrug Resistance

MÁRTA NOVÉ, ANNAMÁRIA KINCSES, JÓZSEF MOLNÁR, LEONARD AMARAL, GABRIELLA SPENGLER

In Vivo. 2020 Jan-Feb; 34(1): 65–71. Published online 2020 Jan 3. doi: 10.21873/invivo.11746

PMCID:: PMC6984089

Abstract Article PDF–266K

Select item 69223393.

Correction: Origins of DNA replication

The PLOS Genetics Staff

PLoS Genet. 2019 Dec; 15(12): e1008556. Published online 2019 Dec 19. doi: 10.1371/journal.pgen.1008556

Corrects:: PLoS Genet. 2019 Sep; 15(9): e1008320.

PMCID:: PMC6922339

Correction PDF–432K

Select item 69043434.

Coordinated Regulation of Rsd and RMF for Simultaneous Hibernation of Transcription Apparatus and Translation Machinery in Stationary-Phase Escherichia coli

Hideji Yoshida, Akira Wada, Tomohiro Shimada, Yasushi Maki, Akira Ishihama

Front Genet. 2019; 10: 1153. Published online 2019 Dec 4. doi: 10.3389/fgene.2019.01153

PMCID:: PMC6904343

Abstract Article PDF–4.1M

Select item 68246215.

Etoposide Induces Mitochondrial Dysfunction and Cellular Senescence in Primary Cultured Rat Astrocytes

Minji Bang, Do Gyeong Kim, Edson Luck Gonzales, Kyoung Ja Kwon, Chan Young Shin

Biomol Ther (Seoul) 2019 Nov; 27(6): 530–539. Published online 2019 Oct 24. doi: 10.4062/biomolther.2019.151

PMCID:: PMC6824621

Abstract Article PDF–23M

Select item 67815716.

The BioCyc collection of microbial genomes and metabolic pathways

Peter D Karp, Richard Billington, Ron Caspi, Carol A Fulcher, Mario Latendresse, Anamika Kothari, Ingrid M Keseler, Markus Krummenacker, Peter E Midford, Quang Ong, Wai Kit Ong, Suzanne M Paley, Pallavi Subhraveti

Brief Bioinform. 2019 Jul; 20(4): 1085–1093. Published online 2017 Aug 17. doi: 10.1093/bib/bbx085

PMCID:: PMC6781571

Abstract Article PDF–885K

Select item 67371317.

ePath: an online database towards comprehensive essential gene annotation for prokaryotes

Xiangzhen Kong, Bin Zhu, Victoria N. Stone, Xiuchun Ge, Fadi E. El-Rami, Huangfu Donghai, Ping Xu

Sci Rep. 2019; 9: 12949. Published online 2019 Sep 10. doi: 10.1038/s41598-019-49098-w

PMCID:: PMC6737131

Abstract Article PDF–1.7M

Select item 67115348.

On the use of in-silico simulations to support experimental design: A case study in microbial inactivation of foods

Alberto Garre, Jose Lucas Peñalver-Soto, Arturo Esnoz, Asunción Iguaz, Pablo S. Fernandez, Jose A. Egea

PLoS One. 2019; 14(8): e0220683. Published online 2019 Aug 27. doi: 10.1371/journal.pone.0220683

PMCID:: PMC6711534

Abstract Article PDF–1.2M

Select item 66224469.

Influential cited references in FEMS Microbiology Letters: lessons from Reference Publication Year Spectroscopy (RPYS)

Robin Haunschild, Johann Bauer, Lutz Bornmann

FEMS Microbiol Lett. 2019 Jun; 366(12): fnz139. Published online 2019 Jun 24. doi: 10.1093/femsle/fnz139

PMCID:: PMC6622446

Abstract Article PDF–475K

Select item 662004310.

The C-terminal tail of the bacterial translocation ATPase SecA modulates its activity

Mohammed Jamshad, Timothy J Knowles, Scott A White, Douglas G Ward, Fiyaz Mohammed, Kazi Fahmida Rahman, Max Wynne, Gareth W Hughes, Günter Kramer, Bernd Bukau, Damon Huber

eLife. 2019; 8: e48385. Published online 2019 Jun 27. doi: 10.7554/eLife.48385

PMCID:: PMC6620043

Abstract Article PDF–4.7M

Select item 661694211.

The Gene Encoding NAD-Dependent Epimerase/Dehydratase, wcaG, Affects Cell Surface Properties, Virulence, and Extracellular Enzyme Production in the Soft Rot Phytopathogen, Pectobacteriumcarotovorum

Rabiul Islam, Shyretha Brown, Ali Taheri, C. Korsi Dumenyo

Microorganisms. 2019 Jun; 7(6): 172. Published online 2019 Jun 13. doi: 10.3390/microorganisms7060172

PMCID:: PMC6616942

Abstract Article PDF–3.6M

Select item 658705712.

Thermodynamic properties of microorganisms: determination and analysis of enthalpy, entropy, and Gibbs free energy of biomass, cells and colonies of 32 microorganism species

Marko Popovic

Heliyon. 2019 Jun; 5(6): e01950. Published online 2019 Jun 18. doi: 10.1016/j.heliyon.2019.e01950

PMCID:: PMC6587057

Abstract Article PDF–754K

Select item 651804213.

Metabolic Modeling of Pectobacterium parmentieri SCC3193 Provides Insights into Metabolic Pathways of Plant Pathogenic Bacteria

Sabina Zoledowska, Luana Presta, Marco Fondi, Francesca Decorosi, Luciana Giovannetti, Alessio Mengoni, Ewa Lojkowska

Microorganisms. 2019 Apr; 7(4): 101. Published online 2019 Apr 5. doi: 10.3390/microorganisms7040101

PMCID:: PMC6518042

Abstract Article PDF–1.3M

Select item 649957714.

Modulation of Toxin-Antitoxin System Rnl AB Type II in Phage-Resistant Gammaproteobacteria Surviving Photodynamic Treatment

Nava Hosseini, Maryam Pourhajibagher, Nasim Chiniforush, Nazanin Hosseinkhan, Parizad Rezaie, Abbas Bahador

J Lasers Med Sci. 2019 Winter; 10(1): 21–28. Published online 2018 Dec 15. doi: 10.15171/jlms.2019.03

PMCID:: PMC6499577

Abstract Article PDF–463K

Select item 648927715.

Peptide-based functional annotation of carbohydrate-active enzymes by conserved unique peptide patterns (CUPP)

Kristian Barrett, Lene Lange

Biotechnol Biofuels. 2019; 12: 102. Published online 2019 Apr 30. doi: 10.1186/s13068-019-1436-5

PMCID:: PMC6489277

Abstract Article PDF–2.5M

Select item 640908616.

Lightweight data management with dtool

Tjelvar S.G. Olsson, Matthew Hartley

PeerJ. 2019; 7: e6562. Published online 2019 Mar 7. doi: 10.7717/peerj.6562

PMCID:: PMC6409086

Abstract Article PDF–440K

Select item 638241117.

The Short Chain Fatty Acid Butyrate Imprints an Antimicrobial Program in Macrophages

Julie Schulthess, Sumeet Pandey, Melania Capitani, Kevin C. Rue-Albrecht, Isabelle Arnold, Fanny Franchini, Agnieszka Chomka, Nicholas E. Ilott, Daniel G.W. Johnston, Elisabete Pires, James McCullagh, Stephen N. Sansom, Carolina V. Arancibia-Cárcamo, Holm H. Uhlig, Fiona Powrie

Immunity. 2019 Feb 19; 50(2): 432–445.e7. doi: 10.1016/j.immuni.2018.12.018