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Items: 1 to 20 of 26

1.
High-Throughput Identification of Putative Antimicrobial Peptides from Multi-Omics Data of the Lined Seahorse (Hippocampus erectus)
Xiyang Chen, Yunhai Yi, Xinxin You, Jie Liu, Qiong Shi
Mar Drugs. 2020 Jan; 18(1): 30. Published online 2019 Dec 29. doi: 10.3390/md18010030
PMCID:
PMC7024384
AbstractArticlePDF–27M
2.
A Comparative Genomics Study on the Molecular Evolution of Serotonin/Melatonin Biosynthesizing Enzymes in Vertebrates
Yunyun Lv, Yanping Li, Jia Li, Chao Bian, Chuanjie Qin, Qiong Shi
Front Mol Biosci. 2020; 7: 11. Published online 2020 Feb 4. doi: 10.3389/fmolb.2020.00011
PMCID:
PMC7010912
AbstractArticlePDF–6.1M
3.
The round goby genome provides insights into mechanisms that may facilitate biological invasions
Irene Adrian-Kalchhauser, Anders Blomberg, Tomas Larsson, Zuzana Musilova, Claire R. Peart, Martin Pippel, Monica Hongroe Solbakken, Jaanus Suurväli, Jean-Claude Walser, Joanna Yvonne Wilson, Magnus Alm Rosenblad, Demian Burguera, Silvia Gutnik, Nico Michiels, Mats Töpel, Kirill Pankov, Siegfried Schloissnig, Sylke Winkler
BMC Biol. 2020; 18: 11. Published online 2020 Jan 28. doi: 10.1186/s12915-019-0731-8
PMCID:
PMC6988351
AbstractArticlePDF–7.2M
4.
A Comparative Genomic and Transcriptional Survey Providing Novel Insights into Bone Morphogenetic Protein 2 (bmp2) in Fishes
Guang Yang, Zhendong Qin, Hongyan Kou, Rishen Liang, Lijuan Zhao, Shoujia Jiang, Li Lin, Kai Zhang
Int J Mol Sci. 2019 Dec; 20(24): 6137. Published online 2019 Dec 5. doi: 10.3390/ijms20246137
PMCID:
PMC6940749
AbstractArticlePDF–5.3M
5.
Incomer, a DD36E family of Tc1/mariner transposons newly discovered in animals
Yatong Sang, Bo Gao, Mohamed Diaby, Wencheng Zong, Cai Chen, Dan Shen, Saisai Wang, Yali Wang, Zoltán Ivics, Chengyi Song
Mob DNA. 2019; 10: 45. Published online 2019 Nov 23. doi: 10.1186/s13100-019-0188-x
PMCID:
PMC6875036
AbstractArticlePDF–1.7M
6.
Whole Genome Sequencing of the Giant Grouper (Epinephelus lanceolatus) and High-Throughput Screening of Putative Antimicrobial Peptide Genes
Dengdong Wang, Xiyang Chen, Xinhui Zhang, Jia Li, Yunhai Yi, Chao Bian, Qiong Shi, Haoran Lin, Shuisheng Li, Yong Zhang, Xinxin You
Mar Drugs. 2019 Sep; 17(9): 503. Published online 2019 Aug 28. doi: 10.3390/md17090503
PMCID:
PMC6780625
AbstractArticlePDF–3.1M
7.
A Comparative Metagenomics Study on Gastrointestinal Microbiota in Amphibious Mudskippers and Other Vertebrate Animals
Yunhai Yi, Lifeng Liang, Zhilin Wang, Peng Ai, Xinxin You, Chao Bian, Qiong Shi, Bo Dong
Animals (Basel) 2019 Sep; 9(9): 660. Published online 2019 Sep 6. doi: 10.3390/ani9090660
PMCID:
PMC6769816
AbstractArticlePDF–2.8M
8.
Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey
Junmin Xu, Yanping Li, Yunyun Lv, Chao Bian, Xinxin You, Daiji Endoh, Hiroki Teraoka, Qiong Shi
Genes (Basel) 2019 Mar; 10(3): 203. Published online 2019 Mar 8. doi: 10.3390/genes10030203
PMCID:
PMC6470480
AbstractArticlePDF–5.5M
9.
FishTEDB: a collective database of transposable elements identified in the complete genomes of fish
Feng Shao, Jianrong Wang, Hongen Xu, Zuogang Peng
Database (Oxford) 2018; 2018: bax106. Published online 2018 Jan 16. doi: 10.1093/database/bax106
PMCID:
PMC6404401
AbstractArticlePDF–715K
10.
Trained Innate Immunity of Fish Is a Viable Approach in Larval Aquaculture
Zuobing Zhang, Heng Chi, Roy A. Dalmo
Front Immunol. 2019; 10: 42. Published online 2019 Jan 25. doi: 10.3389/fimmu.2019.00042
PMCID:
PMC6355669
AbstractArticlePDF–594K
11.
Genome sequence of walking catfish (Clarias batrachus) provides insights into terrestrial adaptation
Ning Li, Lisui Bao, Tao Zhou, Zihao Yuan, Shikai Liu, Rex Dunham, Yuanning Li, Kun Wang, Xiaoyan Xu, Yulin Jin, Qifan Zeng, Sen Gao, Qiang Fu, Yang Liu, Yujia Yang, Qi Li, Axel Meyer, Dongya Gao, Zhanjiang Liu
BMC Genomics. 2018; 19: 952. Published online 2018 Dec 20. doi: 10.1186/s12864-018-5355-9
PMCID:
PMC6302426
AbstractArticlePDF–2.1M
12.
High Throughput Identification of Antihypertensive Peptides from Fish Proteome Datasets
Yunhai Yi, Yunyun Lv, Lijun Zhang, Jian Yang, Qiong Shi
Mar Drugs. 2018 Oct; 16(10): 365. Published online 2018 Oct 2. doi: 10.3390/md16100365
PMCID:
PMC6212880
AbstractArticlePDF–3.7M
13.
A Comparative Genomic and Transcriptomic Survey Provides Novel Insights into N-Acetylserotonin Methyltransferase (ASMT) in Fish
Kai Zhang, Zhiqiang Ruan, Jia Li, Chao Bian, Xinxin You, Steven L. Coon, Qiong Shi
Molecules. 2017 Oct; 22(10): 1653. Published online 2017 Oct 2. doi: 10.3390/molecules22101653
PMCID:
PMC6151645
AbstractArticlePDF–5.0M
14.
A Comparative Genomic Survey Provides Novel Insights into Molecular Evolution of l-Aromatic Amino Acid Decarboxylase in Vertebrates
Yanping Li, Yunyun Lv, Chao Bian, Xinxin You, Li Deng, Qiong Shi
Molecules. 2018 Apr; 23(4): 917. Published online 2018 Apr 16. doi: 10.3390/molecules23040917
PMCID:
PMC6017361
AbstractArticlePDF–30M
15.
Vertebrate Genome Evolution in the Light of Fish Cytogenomics and rDNAomics
Radka Symonová, W. Mike Howell
Genes (Basel) 2018 Feb; 9(2): 96. Published online 2018 Feb 14. doi: 10.3390/genes9020096
PMCID:
PMC5852592
AbstractArticlePDF–5.9M
16.
The Genome 10K Project: A Way Forward
Klaus-Peter Koepfli, Benedict Paten, the Genome 10K Community of Scientists, Stephen J. O’Brien
Annu Rev Anim Biosci. Author manuscript; available in PMC 2018 Mar 5.
Published in final edited form as: Annu Rev Anim Biosci. 2015; 3: 57–111. doi: 10.1146/annurev-animal-090414-014900
PMCID:
PMC5837290
AbstractArticlePDF–883K
17.
Mudskippers and Their Genetic Adaptations to an Amphibious Lifestyle
Xinxin You, Min Sun, Jia Li, Chao Bian, Jieming Chen, Yunhai Yi, Hui Yu, Qiong Shi
Animals (Basel) 2018 Feb; 8(2): 24. Published online 2018 Feb 7. doi: 10.3390/ani8020024
PMCID:
PMC5836032
AbstractArticlePDF–1.9M
18.
High-Throughput Identification of Antimicrobial Peptides from Amphibious Mudskippers
Yunhai Yi, Xinxin You, Chao Bian, Shixi Chen, Zhao Lv, Limei Qiu, Qiong Shi
Mar Drugs. 2017 Nov; 15(11): 364. Published online 2017 Nov 22. doi: 10.3390/md15110364
PMCID:
PMC5706053
AbstractArticlePDF–6.6M
19.
TRT, a Vertebrate and Protozoan Tc1-Like Transposon: Current Activity and Horizontal Transfer
Hua-Hao Zhang, Guo-Yin Li, Xiao-Min Xiong, Min-Jin Han, Xiao-Gu Zhang, Fang-Yin Dai
Genome Biol Evol. 2016 Sep; 8(9): 2994–3005. Published online 2016 Sep 25. doi: 10.1093/gbe/evw213
PMCID:
PMC5630946
AbstractArticlePDF–427K
20.
A novel viral lineage distantly related to herpesviruses discovered within fish genome sequence data
Amr Aswad, Aris Katzourakis
Virus Evol. 2017 Jul; 3(2): vex016. Published online 2017 Aug 4. doi: 10.1093/ve/vex016
PMCID:
PMC5544889
AbstractArticlePDF–862K

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