PMC Links for Taxonomy (Select 325452) - PMC

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Items: 19

Select item 69806121.

A LAMP at the end of the tunnel: A rapid, field deployable assay for the kauri dieback pathogen, Phytophthora agathidicida

Richard C. Winkworth, Briana C. W. Nelson, Stanley E. Bellgard, Chantal M. Probst, Patricia A. McLenachan, Peter J. Lockhart

PLoS One. 2020; 15(1): e0224007. Published online 2020 Jan 24. doi: 10.1371/journal.pone.0224007

PMCID:: PMC6980612

Abstract Article PDF–1.3M

Select item 66378782.

Genome sequencing of oomycete isolates from Chile supports the New Zealand origin of Phytophthora kernoviae and makes available the first Nothophytophthora sp. genome

David J. Studholme, Preeti Panda, Eugenio Sanfuentes Von Stowasser, Mariela González, Rowena Hill, Christine Sambles, Murray Grant, Nari M. Williams, Rebecca L. McDougal

Mol Plant Pathol. 2019 Mar; 20(3): 423–431. Published online 2018 Dec 5. doi: 10.1111/mpp.12765

PMCID:: PMC6637878

Abstract Article PDF–617K

Select item 64797583.

Alternative Molecular-Based Diagnostic Methods of Plant Pathogenic Fungi Affecting Berry Crops—A Review

Dominika Malarczyk, Jacek Panek, Magdalena Frąc

Molecules. 2019 Apr; 24(7): 1200. Published online 2019 Mar 27. doi: 10.3390/molecules24071200

PMCID:: PMC6479758

Abstract Article PDF–1.5M

Select item 59154614.

Invasive alien pests threaten the carbon stored in Europe’s forests

Rupert Seidl, Günther Klonner, Werner Rammer, Franz Essl, Adam Moreno, Mathias Neumann, Stefan Dullinger

Nat Commun. 2018; 9: 1626. Published online 2018 Apr 24. doi: 10.1038/s41467-018-04096-w

PMCID:: PMC5915461

Abstract Article PDF–1.5M

Select item 54534825.

Transcriptome analysis of Phytophthora litchii reveals pathogenicity arsenals and confirms taxonomic status

Jinhua Sun, Zhaoyin Gao, Xinchun Zhang, Xiaoxiao Zou, Lulu Cao, Jiabao Wang

PLoS One. 2017; 12(6): e0178245. Published online 2017 Jun 1. doi: 10.1371/journal.pone.0178245

PMCID:: PMC5453482

Abstract Article PDF–3.5M

Select item 53900946.

Phylogenomic Reconstruction of the Oomycete Phylogeny Derived from 37 Genomes

Charley G. P. McCarthy, David A. Fitzpatrick

mSphere. 2017 Mar-Apr; 2(2): e00095-17. Published online 2017 Apr 12. doi: 10.1128/mSphere.00095-17

PMCID:: PMC5390094

Abstract Article PDF–1.8M

Select item 50610607.

Genome sequences of six Phytophthora species threatening forest ecosystems

Nicolas Feau, Greg Taylor, Angela L. Dale, Braham Dhillon, Guillaume J. Bilodeau, Inanç Birol, Steven J.M. Jones, Richard C. Hamelin

Genom Data. 2016 Dec; 10: 85–88. Published online 2016 Oct 3. doi: 10.1016/j.gdata.2016.09.013

PMCID:: PMC5061060

Abstract Article PDF–320K

Select item 50238478.

Systematic Search for Evidence of Interdomain Horizontal Gene Transfer from Prokaryotes to Oomycete Lineages

Charley G. P. McCarthy, David A. Fitzpatrick

mSphere. 2016 Sep-Oct; 1(5): e00195-16. Published online 2016 Sep 14. doi: 10.1128/mSphere.00195-16

PMCID:: PMC5023847

Abstract Article PDF–3.7M

Select item 47785899.

Genome sequences of six Phytophthora species associated with forests in New Zealand

D.J. Studholme, R.L. McDougal, C. Sambles, E. Hansen, G. Hardy, M. Grant, R.J. Ganley, N.M. Williams

Genom Data. 2016 Mar; 7: 54–56. Published online 2015 Nov 22. doi: 10.1016/j.gdata.2015.11.015

PMCID:: PMC4778589

Abstract Article PDF–187K

Select item 477259010.

A unique species in Phytophthora clade 10, Phytophthora intercalaris sp. nov., recovered from stream and irrigation water in the eastern USA

X. Yang, Y. Balci, N. J. Brazee, A. L. Loyd, C. X. Hong

Int J Syst Evol Microbiol. 2016 Feb; 66(Pt 2): 845–855. doi: 10.1099/ijsem.0.000800

PMCID:: PMC4772590

Abstract Article PDF–597K

Select item 470278811.

PhytoPath: an integrative resource for plant pathogen genomics

Helder Pedro, Uma Maheswari, Martin Urban, Alistair George Irvine, Alayne Cuzick, Mark D. McDowall, Daniel M. Staines, Eugene Kulesha, Kim Elizabeth Hammond-Kosack, Paul Julian Kersey

Nucleic Acids Res. 2016 Jan 4; 44(Database issue): D688–D693. Published online 2015 Oct 17. doi: 10.1093/nar/gkv1052

PMCID:: PMC4702788

Abstract Article PDF–1.8M

Select item 466474112.

Draft genome sequences of Phytophthora kernoviae and Phytophthora ramorum lineage EU2 from Scotland

Christine Sambles, Alexandra Schlenzig, Paul O'Neill, Murray Grant, David J. Studholme

Genom Data. 2015 Dec; 6: 193–194. Published online 2015 Sep 22. doi: 10.1016/j.gdata.2015.09.010

PMCID:: PMC4664741

Abstract Article PDF–139K

Select item 453729213.

Molecular Detection of 10 of the Most Unwanted Alien Forest Pathogens in Canada Using Real-Time PCR

Josyanne Lamarche, Amélie Potvin, Gervais Pelletier, Don Stewart, Nicolas Feau, Dario I. O. Alayon, Angela L. Dale, Aaron Coelho, Adnan Uzunovic, Guillaume J. Bilodeau, Stephan C. Brière, Richard C. Hamelin, Philippe Tanguay

PLoS One. 2015; 10(8): e0134265. Published online 2015 Aug 14. doi: 10.1371/journal.pone.0134265

PMCID:: PMC4537292

Abstract Article PDF–1.2M

Select item 451026914.

Phytopythium: molecular phylogeny and systematics

A.W.A.M. de Cock, A.M. Lodhi, T.L. Rintoul, K. Bala, G.P. Robideau, Z. Gloria Abad, M.D. Coffey, S. Shahzad, C.A. Lévesque

Persoonia. 2015 Jun; 34: 25–39. Published online 2014 Oct 30. doi: 10.3767/003158515X685382

PMCID:: PMC4510269

Abstract Article PDF–672K

Select item 360759615.

Identification and Characterisation CRN Effectors in Phytophthora capsici Shows Modularity and Functional Diversity

Remco Stam, Julietta Jupe, Andrew J. M. Howden, Jenny A. Morris, Petra C. Boevink, Pete E. Hedley, Edgar Huitema

PLoS One. 2013; 8(3): e59517. Published online 2013 Mar 25. doi: 10.1371/journal.pone.0059517

Correction in:: PLoS One. 2013; 8(4): 10.1371/annotation/90bd45cb-33a7-426f-a928-9ddc351b08cc.

PMCID:: PMC3607596

Abstract Article PDF–4.0M

Select item 335981416.

The inclusion of downy mildews in a multi-locus-dataset and its reanalysis reveals a high degree of paraphyly in Phytophthora

Fabian Runge, Sabine Telle, Sebastian Ploch, Elizabeth Savory, Brad Day, Rahul Sharma, Marco Thines

IMA Fungus. 2011 Dec; 2(2): 163–171. Published online 2011 Nov 11. doi: 10.5598/imafungus.2011.02.02.07

PMCID:: PMC3359814

Abstract Article PDF–858K

Select item 313039417.

Infectious diseases of animals and plants: an interdisciplinary approach

Katy Wilkinson, Wyn P. Grant, Laura E. Green, Stephen Hunter, Michael J. Jeger, Philip Lowe, Graham F. Medley, Peter Mills, Jeremy Phillipson, Guy M. Poppy, Jeff Waage

Philos Trans R Soc Lond B Biol Sci. 2011 Jul 12; 366(1573): 1933–1942. doi: 10.1098/rstb.2010.0415

PMCID:: PMC3130394

Abstract Article PDF–222K

Select item 313039318.

Integrating natural and social science perspectives on plant disease risk, management and policy formulation

Peter Mills, Katharina Dehnen-Schmutz, Brian Ilbery, Mike Jeger, Glyn Jones, Ruth Little, Alan MacLeod, Steve Parker, Marco Pautasso, Stephane Pietravalle, Damian Maye

Philos Trans R Soc Lond B Biol Sci. 2011 Jul 12; 366(1573): 2035–2044. doi: 10.1098/rstb.2010.0411

PMCID:: PMC3130393

Abstract Article PDF–327K

Select item 128765919.

On-Site DNA Extraction and Real-Time PCR for Detection of Phytophthora ramorum in the Field

J. A. Tomlinson, N. Boonham, K. J. D. Hughes, R. L. Griffin, I. Barker

Appl Environ Microbiol. 2005 Nov; 71(11): 6702–6710. doi: 10.1128/AEM.71.11.6702-6710.2005

PMCID:: PMC1287659

Abstract Article PDF–213K

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PMC Links for Taxonomy (Select 325452) (19)
PMC
Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N44707 N44707_...
Salmonella enterica subsp. enterica serovar Heidelberg strain CVM N44707 N44707_contig_304, whole genome shotgun sequence
gi|911241956|gb|LHFN01000302.1||gnl LHFN01|N44707_contig_304

Nucleotide
PREDICTED: Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript vari...
PREDICTED: Homo sapiens collagen type IX alpha 2 chain (COL9A2), transcript variant X2, mRNA
gi|2217264121|ref|XM_011540716.3|

Nucleotide

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