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Select item 66802811.

Whole‐genome duplications followed by tandem duplications drive diversification of the protein modifier SUMO in Angiosperms

Valentin Hammoudi, Georgios Vlachakis, M. Eric Schranz, Harrold A. van den Burg

New Phytol. 2016 Jul; 211(1): 172–185. Published online 2016 Mar 2. doi: 10.1111/nph.13911

PMCID:: PMC6680281

Abstract Article PDF–2.5M

Select item 65919752.

Helitron distribution in Brassicaceae and whole Genome Helitron density as a character for distinguishing plant species

Kaining Hu, Kai Xu, Jing Wen, Bin Yi, Jinxiong Shen, Chaozhi Ma, Tingdong Fu, Yidan Ouyang, Jinxing Tu

BMC Bioinformatics. 2019; 20: 354. Published online 2019 Jun 24. doi: 10.1186/s12859-019-2945-8

PMCID:: PMC6591975

Abstract Article PDF–4.4M

Select item 63992103.

Angiosperm-Wide and Family-Level Analyses of AP2/ERF Genes Reveal Differential Retention and Sequence Divergence After Whole-Genome Duplication

Linbo Wang, Hong Ma, Juan Lin

Front Plant Sci. 2019; 10: 196. Published online 2019 Feb 26. doi: 10.3389/fpls.2019.00196

PMCID:: PMC6399210

Abstract Article PDF–5.6M

Select item 63832674.

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

Xin Qiao, Qionghou Li, Hao Yin, Kaijie Qi, Leiting Li, Runze Wang, Shaoling Zhang, Andrew H. Paterson

Genome Biol. 2019; 20: 38. Published online 2019 Feb 21. doi: 10.1186/s13059-019-1650-2

PMCID:: PMC6383267

Abstract Article PDF–3.3M

Select item 62749385.

Genome-Wide Identification and Characterization of Pectin Methylesterase Inhibitor Genes in Brassica oleracea

Tingting Liu, Hui Yu, Xingpeng Xiong, Youjian Yu, Xiaoyan Yue, Jinlong Liu, Jiashu Cao

Int J Mol Sci. 2018 Nov; 19(11): 3338. Published online 2018 Oct 26. doi: 10.3390/ijms19113338

PMCID:: PMC6274938

Abstract Article PDF–17M

Select item 60143616.

The genomes of two Eutrema species provide insight into plant adaptation to high altitudes

Xinyi Guo, Quanjun Hu, Guoqian Hao, Xiaojuan Wang, Dan Zhang, Tao Ma, Jianquan Liu

DNA Res. 2018 Jun; 25(3): 307–315. Published online 2018 Jan 30. doi: 10.1093/dnares/dsy003

PMCID:: PMC6014361

Abstract Article PDF–778K

Select item 59835857.

Genome-Wide Identification, Molecular Evolution, and Expression Profiling Analysis of Pectin Methylesterase Inhibitor Genes in Brassica campestris ssp. chinensis

Tingting Liu, Hui Yu, Xingpeng Xiong, Xiaoyan Yue, Youjian Yu, Li Huang, Jiashu Cao

Int J Mol Sci. 2018 May; 19(5): 1338. Published online 2018 May 2. doi: 10.3390/ijms19051338

PMCID:: PMC5983585

Abstract Article PDF–5.0M

Select item 59091718.

The Sequenced Angiosperm Genomes and Genome Databases

Fei Chen, Wei Dong, Jiawei Zhang, Xinyue Guo, Junhao Chen, Zhengjia Wang, Zhenguo Lin, Haibao Tang, Liangsheng Zhang

Front Plant Sci. 2018; 9: 418. Published online 2018 Apr 13. doi: 10.3389/fpls.2018.00418

PMCID:: PMC5909171

Abstract Article PDF–2.3M

Select item 58508689.

Patterns of Polymorphism at the Self-Incompatibility Locus in 1,083 Arabidopsis thaliana Genomes

Takashi Tsuchimatsu, Pauline M. Goubet, Sophie Gallina, Anne-Catherine Holl, Isabelle Fobis-Loisy, Hélène Bergès, William Marande, Elisa Prat, Dazhe Meng, Quan Long, Alexander Platzer, Magnus Nordborg, Xavier Vekemans, Vincent Castric

Mol Biol Evol. 2017 Aug; 34(8): 1878–1889. Published online 2017 Apr 4. doi: 10.1093/molbev/msx122

PMCID:: PMC5850868

Abstract Article PDF–1.8M

Select item 564865610.

Inbreeding depression is high in a self‐incompatible perennial herb population but absent in a self‐compatible population showing mixed mating

Marie Voillemot, John R. Pannell

Ecol Evol. 2017 Oct; 7(20): 8535–8544. Published online 2017 Sep 12. doi: 10.1002/ece3.3354

PMCID:: PMC5648656

Abstract Article PDF–555K

Select item 546916611.

Benefits of gene flow are mediated by individual variability in self‐compatibility in small isolated populations of an endemic plant species

Christopher T. Frye, Maile C. Neel

Evol Appl. 2017 Jul; 10(6): 551–562. Published online 2016 Dec 26. doi: 10.1111/eva.12437

PMCID:: PMC5469166

Abstract Article PDF–658K

Select item 542243412.

Evolinc: A Tool for the Identification and Evolutionary Comparison of Long Intergenic Non-coding RNAs

Andrew D. L. Nelson, Upendra K. Devisetty, Kyle Palos, Asher K. Haug-Baltzell, Eric Lyons, Mark A. Beilstein

Front Genet. 2017; 8: 52. Published online 2017 May 9. doi: 10.3389/fgene.2017.00052

PMCID:: PMC5422434

Abstract Article PDF–1.5M

Select item 521836813.

Maintenance of mixed mating after the loss of self-incompatibility in a long-lived perennial herb

Marie Voillemot, John R. Pannell

Ann Bot. 2017 Jan; 119(1): 177–190. Published online 2016 Dec 10. doi: 10.1093/aob/mcw203

PMCID:: PMC5218368

Abstract Article PDF–563K

Select item 513961514.

Genome-Wide Survey of Flavonoid Biosynthesis Genes and Gene Expression Analysis between Black- and Yellow-Seeded Brassica napus

Cunmin Qu, Huiyan Zhao, Fuyou Fu, Zhen Wang, Kai Zhang, Yan Zhou, Xin Wang, Rui Wang, Xinfu Xu, Zhanglin Tang, Kun Lu, Jia-Na Li

Front Plant Sci. 2016; 7: 1755. Published online 2016 Dec 6. doi: 10.3389/fpls.2016.01755

PMCID:: PMC5139615

Abstract Article PDF–6.7M

Select item 512553615.

High resolution expression map of the Arabidopsis root reveals alternative splicing and lincRNA regulation

Song Li, Masashi Yamada, Xinwei Han, Uwe Ohler, Philip N. Benfey

Dev Cell. Author manuscript; available in PMC 2017 Nov 21.

Published in final edited form as: Dev Cell. 2016 Nov 21; 39(4): 508–522. Published online 2016 Nov 10. doi: 10.1016/j.devcel.2016.10.012

PMCID:: PMC5125536

Abstract Article PDF–2.4M

Select item 503065416.

Helitron-like transposons contributed to the mating system transition from out-crossing to self-fertilizing in polyploid Brassica napus L.

Changbin Gao, Guilong Zhou, Chaozhi Ma, Wen Zhai, Tong Zhang, Zhiquan Liu, Yong Yang, Ming Wu, Yao Yue, Zhiqiang Duan, Yaya Li, Bing Li, Jijun Li, Jinxiong Shen, Jinxing Tu, Tingdong Fu

Sci Rep. 2016; 6: 33785. Published online 2016 Sep 21. doi: 10.1038/srep33785

PMCID:: PMC5030654

Abstract Article PDF–1.2M

Select item 501594517.

A Genomic Analysis of Factors Driving lincRNA Diversification: Lessons from Plants

Andrew D. L. Nelson, Evan S. Forsythe, Upendra K. Devisetty, David S. Clausen, Asher K. Haug-Batzell, Ari M. R. Meldrum, Michael R. Frank, Eric Lyons, Mark A. Beilstein

G3 (Bethesda) 2016 Sep; 6(9): 2881–2891. Published online 2016 Jul 15. doi: 10.1534/g3.116.030338