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Items: 1 to 20 of 203

1.
Optimizing DNA Extraction Methods for Nanopore Sequencing of Neisseria gonorrhoeae Directly from Urine Samples
Teresa L. Street, Leanne Barker, Nicholas D. Sanderson, James Kavanagh, Sarah Hoosdally, Kevin Cole, Robert Newnham, Mathyruban Selvaratnam, Monique Andersson, Martin J. Llewelyn, Justin O’Grady, Derrick W. Crook, David W. Eyre
J Clin Microbiol. 2020 Mar; 58(3): e01822-19. Prepublished online 2019 Dec 18. Published online 2020 Feb 24. doi: 10.1128/JCM.01822-19
PMCID:
PMC7041563
AbstractArticlePDF–1.9M
2.
The Role of the Human Microbiome in Otolaryngology–Head and Neck Surgery: A Contemporary Review
Paul Hong, Cindy M. Liu, Lora Nordstrom, Anil K. Lalwani
Laryngoscope. Author manuscript; available in PMC 2020 Jan 31.
Published in final edited form as: Laryngoscope. 2014 Jun; 124(6): 1352–1357. Published online 2013 Dec 6. doi: 10.1002/lary.24490
PMCID:
PMC6993805
AbstractArticlePDF–317K
3.
Analysis of the Microbiome in the Adenoids of Korean Children with Otitis Media with Effusion
Sung Kyun Kim, Seok Jin Hong, Kyung Ho Pak, Seok Min Hong
J Int Adv Otol. 2019 Dec; 15(3): 379–385. doi: 10.5152/iao.2019.6650
PMCID:
PMC6937193
AbstractArticlePDF–3.7M
4.
A 5700 year-old human genome and oral microbiome from chewed birch pitch
Theis Z. T. Jensen, Jonas Niemann, Katrine Højholt Iversen, Anna K. Fotakis, Shyam Gopalakrishnan, Åshild J. Vågene, Mikkel Winther Pedersen, Mikkel-Holger S. Sinding, Martin R. Ellegaard, Morten E. Allentoft, Liam T. Lanigan, Alberto J. Taurozzi, Sofie Holtsmark Nielsen, Michael W. Dee, Martin N. Mortensen, Mads C. Christensen, Søren A. Sørensen, Matthew J. Collins, M. Thomas P. Gilbert, Martin Sikora, Simon Rasmussen, Hannes Schroeder
Nat Commun. 2019; 10: 5520. Published online 2019 Dec 17. doi: 10.1038/s41467-019-13549-9
PMCID:
PMC6917805
AbstractArticlePDF–2.4M
5.
Recent Trends in Bacteriology of Adult Patients with Chronic Rhinosinusitis
Doyeon Kim, Abdullah M. Assiri, Ji Heui Kim
J Clin Med. 2019 Nov; 8(11): 1889. Published online 2019 Nov 6. doi: 10.3390/jcm8111889
PMCID:
PMC6912634
AbstractArticlePDF–212K
6.
Systematic processing of ribosomal RNA gene amplicon sequencing data
Julien Tremblay, Etienne Yergeau
Gigascience. 2019 Dec; 8(12): giz146. Published online 2019 Dec 9. doi: 10.1093/gigascience/giz146
PMCID:
PMC6901069
AbstractArticlePDF–1.4M
7.
Analysis of culturable microbiota present in the stomach of children with gastric symptoms
Changcheng Guo, Fang Liu, Li Zhu, Fangcao Wu, Guzhen Cui, Yan Xiong, Qiong Wang, Lin Yin, Caixia Wang, Huan Wang, Xiaojuan Wu, Zhengrong Zhang, Zhenghong Chen
Braz J Microbiol. 2019 Jan; 50(1): 107–115. Published online 2018 Dec 19. doi: 10.1007/s42770-018-0030-5
PMCID:
PMC6863212
AbstractArticlePDF–480K
8.
Development of a reference data set for assigning Streptococcus and Enterococcus species based on next generation sequencing of the 16S–23S rRNA region
Maja Kosecka-Strojek, Artur J. Sabat, Viktoria Akkerboom, Anna M. D. (Mirjam) Kooistra-Smid, Jacek Miedzobrodzki, Alexander W. Friedrich
Antimicrob Resist Infect Control. 2019; 8: 178. Published online 2019 Nov 15. doi: 10.1186/s13756-019-0622-3
PMCID:
PMC6858756
AbstractArticlePDF–622K
9.
Illumina-based sequencing analysis of pathogenic microorganisms in dental caries patients of different Chinese ethnic groups
Chen Yun, Li Zhiyan, Zhao Chong, Liu Jing, Zhang Xin, Zhu Derui
J Int Med Res. 2019 Oct; 47(10): 5037–5047. Published online 2019 Sep 13. doi: 10.1177/0300060519866939
PMCID:
PMC6833427
AbstractArticlePDF–504K
10.
Potential clinical utility of multiple target quantitative polymerase chain reaction (qPCR) array to detect microbial pathogens in patients with chronic obstructive pulmonary disease (COPD)
Hannah E. O’Farrell, Janet G. Shaw, Felicia Goh, Rayleen V. Bowman, Kwun M. Fong, Lutz Krause, Ian A. Yang
J Thorac Dis. 2019 Oct; 11(Suppl 17): S2254–S2265. doi: 10.21037/jtd.2019.10.39
PMCID:
PMC6831922
AbstractArticlePDF–1.2M
11.
Group A, B, C, and G Streptococcus Lancefield antigen biosynthesis is initiated by a conserved α-d-GlcNAc-β-1,4-l-rhamnosyltransferase
Azul Zorzoli, Benjamin H. Meyer, Elaine Adair, Vladimir I. Torgov, Vladimir V. Veselovsky, Leonid L. Danilov, Dusan Uhrin, Helge C. Dorfmueller
J Biol Chem. 2019 Oct 18; 294(42): 15237–15256. Published online 2019 Sep 10. doi: 10.1074/jbc.RA119.009894
PMCID:
PMC6802508
AbstractArticlePDF–4.8M
12.
Identification of closely related Ixodes species by protein profiling with MALDI-TOF mass spectrometry
Pierre H. Boyer, Lionel Almeras, Olivier Plantard, Antoine Grillon, Émilie Talagrand-Reboul, Karen McCoy, Benoît Jaulhac, Nathalie Boulanger
PLoS One. 2019; 14(10): e0223735. Published online 2019 Oct 17. doi: 10.1371/journal.pone.0223735
PMCID:
PMC6797106
AbstractArticlePDF–2.2M
13.
Prospective observational study of vaginal microbiota pre‐ and post‐rescue cervical cerclage
RG Brown, D Chan, V Terzidou, YS Lee, A Smith, JR Marchesi, DA MacIntyre, PR Bennett
BJOG. 2019 Jun; 126(7): 916–925. Published online 2019 Mar 10. doi: 10.1111/1471-0528.15600
PMCID:
PMC6750128
AbstractArticlePDF–1.5M
14.
Identification of Virulence-Associated Properties by Comparative Genome Analysis of Streptococcus pneumoniae, S. pseudopneumoniae, S. mitis, Three S. oralis Subspecies, and S. infantis
Mogens Kilian, Hervé Tettelin
mBio. 2019 Sep-Oct; 10(5): e01985-19. Published online 2019 Sep 3. doi: 10.1128/mBio.01985-19
Correction in:
mBio. 2019 Sep-Oct; 10(5): e02520-19.
PMCID:
PMC6722419
AbstractArticlePDF–1.2M
15.
Streptococcus pneumoniae Evades Host Cell Phagocytosis and Limits Host Mortality Through Its Cell Wall Anchoring Protein PfbA
Masaya Yamaguchi, Yujiro Hirose, Moe Takemura, Masayuki Ono, Tomoko Sumitomo, Masanobu Nakata, Yutaka Terao, Shigetada Kawabata
Front Cell Infect Microbiol. 2019; 9: 301. Published online 2019 Aug 20. doi: 10.3389/fcimb.2019.00301
PMCID:
PMC6710382
AbstractArticlePDF–3.5M
16.
Profiling microorganisms in whole saliva of children with and without dental caries
Alexandre R. Vieira, N. Luisa Hiller, Evan Powell, Leon Hak‐Jin Kim, Tracy Spirk, Adriana Modesto, Rachael Kreft
Clin Exp Dent Res. 2019 Aug; 5(4): 438–446. Published online 2019 Jun 20. doi: 10.1002/cre2.206
PMCID:
PMC6704248
AbstractArticlePDF–1.3M
17.
Lipoprotein SPD_1609 of Streptococcus pneumoniae Promotes Adherence and Invasion to Epithelial Cells Contributing to Bacterial Virulence
Xiao-Yan Yang, Nan Li, Jing-Yu Xu, Xuesong Sun, Qing-Yu He
Front Microbiol. 2019; 10: 1769. Published online 2019 Jul 30. doi: 10.3389/fmicb.2019.01769
PMCID:
PMC6682666
AbstractArticlePDF–4.2M
18.
An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia
Wenkui Dai, Heping Wang, Qian Zhou, Dongfang Li, Xin Feng, Zhenyu Yang, Wenjian Wang, Chuangzhao Qiu, Zhiwei Lu, Ximing Xu, Mengxuan Lyu, Gan Xie, Yinhu Li, Yanmin Bao, Yanhong Liu, Kunling Shen, Kaihu Yao, Xikang Feng, Yonghong Yang, Ke Zhou, Shuaicheng Li, Yuejie Zheng
Gigascience. 2019 Aug; 8(8): giz093. Published online 2019 Jul 31. doi: 10.1093/gigascience/giz093
PMCID:
PMC6669060
AbstractArticlePDF–1.1M
19.
Genomic Characterization of the Emerging Pathogen Streptococcus pseudopneumoniae
Geneviève Garriss, Priyanka Nannapaneni, Alexandra S. Simões, Sarah Browall, Karthik Subramanian, Raquel Sá-Leão, Herman Goossens, Herminia de Lencastre, Birgitta Henriques-Normark
mBio. 2019 May-Jun; 10(3): e01286-19. Published online 2019 Jun 25. doi: 10.1128/mBio.01286-19
PMCID:
PMC6593409
AbstractArticlePDF–787K
20.
Plasmid detection and assembly in genomic and metagenomic data sets
Dmitry Antipov, Mikhail Raiko, Alla Lapidus, Pavel A. Pevzner
Genome Res. 2019 Jun; 29(6): 961–968. doi: 10.1101/gr.241299.118
PMCID:
PMC6581055
AbstractArticlePDF–1.2M

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