PMC Links for Taxonomy (Select 208963) - PMC

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Items: 13

Select item 62966341.

An in silico structural, functional and phylogenetic analysis with three dimensional protein modeling of alkaline phosphatase enzyme of Pseudomonas aeruginosa

Krishnendu Pramanik, Pallab Kumar Ghosh, Soumyajit Ray, Anumita Sarkar, Soumik Mitra, Tushar Kanti Maiti

J Genet Eng Biotechnol. 2017 Dec; 15(2): 527–537. Published online 2017 Jun 12. doi: 10.1016/j.jgeb.2017.05.003

PMCID:: PMC6296634

Abstract Article PDF–4.6M

Select item 62835982.

Metabolic models and gene essentiality data reveal essential and conserved metabolism in prokaryotes

Joana C. Xavier, Kiran Raosaheb Patil, Isabel Rocha

PLoS Comput Biol. 2018 Nov; 14(11): e1006556. Published online 2018 Nov 16. doi: 10.1371/journal.pcbi.1006556

PMCID:: PMC6283598

Abstract Article PDF–3.4M

Select item 56795103.

Sequence-based information-theoretic features for gene essentiality prediction

Dawit Nigatu, Patrick Sobetzko, Malik Yousef, Werner Henkel

BMC Bioinformatics. 2017; 18: 473. Published online 2017 Nov 9. doi: 10.1186/s12859-017-1884-5

PMCID:: PMC5679510

Abstract Article PDF–845K

Select item 55851664.

Selection for energy efficiency drives strand-biased gene distribution in prokaryotes

Na Gao, Guanting Lu, Martin J. Lercher, Wei-Hua Chen

Sci Rep. 2017; 7: 10572. Published online 2017 Sep 5. doi: 10.1038/s41598-017-11159-3

PMCID:: PMC5585166

Abstract Article PDF–2.9M

Select item 52105225.

OGEE v2: an update of the online gene essentiality database with special focus on differentially essential genes in human cancer cell lines

Wei-Hua Chen, Guanting Lu, Xiao Chen, Xing-Ming Zhao, Peer Bork

Nucleic Acids Res. 2017 Jan 4; 45(Database issue): D940–D944. Published online 2016 Oct 30. doi: 10.1093/nar/gkw1013

PMCID:: PMC5210522

Abstract Article PDF–128K

Select item 50311346.

Protein domain architectures provide a fast, efficient and scalable alternative to sequence-based methods for comparative functional genomics

Jasper J. Koehorst, Edoardo Saccenti, Peter J. Schaap, Vitor A. P. Martins dos Santos, Maria Suarez-Diez

Version 3. F1000Res. 2016; 5: 1987. Published online 2017 Jun 27. doi: 10.12688/f1000research.9416.3

PMCID:: PMC5031134

Abstract Article PDF–5.2M

Select item 38931727.

Metabolic Network Analysis-Based Identification of Antimicrobial Drug Targets in Category A Bioterrorism Agents

Yong-Yeol Ahn, Deok-Sun Lee, Henry Burd, William Blank, Vinayak Kapatral

PLoS One. 2014; 9(1): e85195. Published online 2014 Jan 15. doi: 10.1371/journal.pone.0085195

PMCID:: PMC3893172

Abstract Article PDF–498K

Select item 35985078.

The evolutionary rate of antibacterial drug targets

Arkadiusz Gladki, Szymon Kaczanowski, Pawel Szczesny, Piotr Zielenkiewicz

BMC Bioinformatics. 2013; 14: 36. Published online 2013 Feb 1. doi: 10.1186/1471-2105-14-36

PMCID:: PMC3598507

Abstract Article PDF–559K

Select item 35942839.

CrcZ and CrcX regulate carbon source utilization in Pseudomonas syringae pathovar tomato strain DC3000

Melanie J. Filiatrault, Paul V. Stodghill, Janet Wilson, Bronwyn G. Butcher, Hanrong Chen, Christopher R. Myers, Samuel W. Cartinhour

RNA Biol. 2013 Feb 1; 10(2): 245–255. doi: 10.4161/rna.23019

PMCID:: PMC3594283

Abstract Article PDF–2.4M

Select item 346445810.

Potent Antibacterial Antisense Peptide–Peptide Nucleic Acid Conjugates Against Pseudomonas aeruginosa

Anubrata Ghosal, Peter E. Nielsen

Nucleic Acid Ther. 2012 Oct; 22(5): 323–334. doi: 10.1089/nat.2012.0370

PMCID:: PMC3464458

Abstract Article PDF–739K

Select item 305687511.

The origin of a derived superkingdom: how a gram-positive bacterium crossed the desert to become an archaeon

Ruben E Valas, Philip E Bourne

Biol Direct. 2011; 6: 16. Published online 2011 Feb 28. doi: 10.1186/1745-6150-6-16

PMCID:: PMC3056875

Abstract Article PDF–1.0M

Select item 279428312.

Computational prediction of essential genes in an unculturable endosymbiotic bacterium, Wolbachia of Brugia malayi

Alexander G Holman, Paul J Davis, Jeremy M Foster, Clotilde KS Carlow, Sanjay Kumar

BMC Microbiol. 2009; 9: 243. Published online 2009 Nov 28. doi: 10.1186/1471-2180-9-243

PMCID:: PMC2794283

Abstract Article PDF–1.0M

Select item 193323413.

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

Ibtissem Grissa, Gilles Vergnaud, Christine Pourcel

Nucleic Acids Res. 2007 Jul; 35(Web Server issue): W52–W57. Published online 2007 May 30. doi: 10.1093/nar/gkm360

PMCID:: PMC1933234

Abstract Article PDF–553K

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