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Links from Taxonomy

Items: 9

1.
Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis
Guanghong Zuo, Zhao Xu, Bailin Hao
Life (Basel) 2015 Mar; 5(1): 949–968. Published online 2015 Mar 17. doi: 10.3390/life5010949
PMCID:
PMC4390887
AbstractArticlePDF–1019K
2.
Phylogenetic analysis and evolutionary origins of DNA polymerase X-family members
Rachelle J. Bienstock, William A. Beard, Samuel H. Wilson
DNA Repair (Amst) Author manuscript; available in PMC 2015 Oct 1.
Published in final edited form as: DNA Repair (Amst). 2014 Oct; 22: 77–88. Published online 2014 Aug 9. doi: 10.1016/j.dnarep.2014.07.003
PMCID:
PMC4260717
AbstractArticlePDF–1.9M
3.
Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms
Arshan Nasir, Aisha Naeem, Muhammad Jawad Khan, Horacio D. Lopez-Nicora, Gustavo Caetano-Anollés
Genes (Basel) 2011 Dec; 2(4): 869–911. Published online 2011 Nov 8. doi: 10.3390/genes2040869
PMCID:
PMC3927607
AbstractArticlePDF–2.0M
4.
An ancient family of SelB elongation factor-like proteins with a broad but disjunct distribution across archaea
Gemma C Atkinson, Vasili Hauryliuk, Tanel Tenson
BMC Evol Biol. 2011; 11: 22. Published online 2011 Jan 21. doi: 10.1186/1471-2148-11-22
PMCID:
PMC3037878
AbstractArticlePDF–1.2M
5.
Crystal structure of A3B3 complex of V-ATPase from Thermus thermophilus
Megan J Maher, Satoru Akimoto, Momi Iwata, Koji Nagata, Yoshiko Hori, Masasuke Yoshida, Shigeyuki Yokoyama, So Iwata, Ken Yokoyama
EMBO J. 2009 Dec 2; 28(23): 3771–3779. Published online 2009 Nov 5. doi: 10.1038/emboj.2009.310
PMCID:
PMC2775895
AbstractArticlePDF–1.1M
6.
Minimum Contradiction Matrices in Whole Genome Phylogenies
Marc Thuillard
Evol Bioinform Online. 2008; 4: 237–247. Published online 2008 Jul 21. doi: 10.4137/ebo.s909
PMCID:
PMC2614196
AbstractArticlePDF–498K
7.
Sequence Evidence in the Archaeal Genomes that tRNAs Emerged Through the Combination of Ancestral Genes as 5′ and 3′ tRNA Halves
Kosuke Fujishima, Junichi Sugahara, Masaru Tomita, Akio Kanai
PLoS One. 2008; 3(2): e1622. Published online 2008 Feb 20. doi: 10.1371/journal.pone.0001622
PMCID:
PMC2237900
AbstractArticlePDF–541K
8.
Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12
Jingjun Sun, Kagan Tuncay, Alaa Abi Haidar, Lisa Ensman, Frank Stanley, Michael Trelinski, Peter Ortoleva
Algorithms Mol Biol. 2007; 2: 2. Published online 2007 Mar 30. doi: 10.1186/1748-7188-2-2
PMCID:
PMC1852316
AbstractArticlePDF–707K
9.
Hexameric structures of the archaeal secretion ATPase GspE and implications for a universal secretion mechanism
Atsushi Yamagata, John A Tainer
EMBO J. 2007 Feb 7; 26(3): 878–890. Published online 2007 Jan 25. doi: 10.1038/sj.emboj.7601544
PMCID:
PMC1794398
AbstractArticlePDF–896K

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