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Select item 70291321.

The pentose phosphate pathway of cellulolytic clostridia relies on 6-phosphofructokinase instead of transaldolase

Jeroen G. Koendjbiharie, Shuen Hon, Martin Pabst, Robert Hooftman, David M. Stevenson, Jingxuan Cui, Daniel Amador-Noguez, Lee R. Lynd, Daniel G. Olson, Richard van Kranenburg

J Biol Chem. 2020 Feb 14; 295(7): 1867–1878. Published online 2019 Dec 22. doi: 10.1074/jbc.RA119.011239

PMCID:: PMC7029132

Abstract Article PDF–1.4M

Select item 69935242.

Simulating metagenomic stable isotope probing datasets with MetaSIPSim

Samuel E. Barnett, Daniel H. Buckley

BMC Bioinformatics. 2020; 21: 37. Published online 2020 Jan 30. doi: 10.1186/s12859-020-3372-6

PMCID:: PMC6993524

Abstract Article PDF–1.7M

Select item 69262933.

Development of both type I–B and type II CRISPR/Cas genome editing systems in the cellulolytic bacterium Clostridium thermocellum

Julie E. Walker, Anthony A. Lanahan, Tianyong Zheng, Camilo Toruno, Lee R. Lynd, Jeffrey C. Cameron, Daniel G. Olson, Carrie A. Eckert

Metab Eng Commun. 2020 Jun; 10: e00116. Published online 2019 Nov 28. doi: 10.1016/j.mec.2019.e00116

PMCID:: PMC6926293

Abstract Article PDF–1.4M

Select item 69024704.

Valorization of waste forest biomass toward the production of cello-oligosaccharides with potential prebiotic activity by utilizing customized enzyme cocktails

Anthi Karnaouri, Leonidas Matsakas, Eleni Krikigianni, Ulrika Rova, Paul Christakopoulos

Biotechnol Biofuels. 2019; 12: 285. Published online 2019 Dec 10. doi: 10.1186/s13068-019-1628-z

PMCID:: PMC6902470

Abstract Article PDF–1.4M

Select item 68922125.

The GH10 and GH48 dual-functional catalytic domains from a multimodular glycoside hydrolase synergize in hydrolyzing both cellulose and xylan

Yindi Chu, Zhenzhen Hao, Kaikai Wang, Tao Tu, Huoqing Huang, Yuan Wang, Ying Guo Bai, Yaru Wang, Huiying Luo, Bin Yao, Xiaoyun Su

Biotechnol Biofuels. 2019; 12: 279. Published online 2019 Dec 3. doi: 10.1186/s13068-019-1617-2

PMCID:: PMC6892212

Abstract Article PDF–1.7M

Select item 68288136.

Biochemical characterisation of four rhamnosidases from thermophilic bacteria of the genera Thermotoga, Caldicellulosiruptor and Thermoclostridium

Melanie Baudrexl, Wolfgang H. Schwarz, Vladimir V. Zverlov, Wolfgang Liebl

Sci Rep. 2019; 9: 15924. Published online 2019 Nov 4. doi: 10.1038/s41598-019-52251-0

PMCID:: PMC6828813

Abstract Article PDF–1.3M

Select item 68019047.

Pyruvate Substitutions on Glycoconjugates

Fiona F. Hager, Leander Sützl, Cordula Stefanović, Markus Blaukopf, Christina Schäffer

Int J Mol Sci. 2019 Oct; 20(19): 4929. Published online 2019 Oct 5. doi: 10.3390/ijms20194929

PMCID:: PMC6801904

Abstract Article PDF–2.9M

Select item 67910038.

Is there any association between gut microbiota and type 1 diabetes? A systematic review

Parnian Jamshidi, Saba Hasanzadeh, Azin Tahvildari, Yeganeh Farsi, Mahta Arbabi, João Felipe Mota, Leonardo A. Sechi, Mohammad Javad Nasiri

Gut Pathog. 2019; 11: 49. Published online 2019 Oct 14. doi: 10.1186/s13099-019-0332-7

PMCID:: PMC6791003

Abstract Article PDF–861K

Select item 67674869.

Product solubility control in cellooligosaccharide production by coupled cellobiose and cellodextrin phosphorylase

Chao Zhong, Christiane Luley‐Goedl, Bernd Nidetzky

Biotechnol Bioeng. 2019 Sep; 116(9): 2146–2155. Published online 2019 May 21. doi: 10.1002/bit.27008

PMCID:: PMC6767486

Abstract Article PDF–2.9M

Select item 672039010.

In vitro and in vivo exploration of the cellobiose and cellodextrin phosphorylases panel in Ruminiclostridium cellulolyticum: implication for cellulose catabolism

Nian Liu, Aurélie Fosses, Clara Kampik, Goetz Parsiegla, Yann Denis, Nicolas Vita, Henri-Pierre Fierobe, Stéphanie Perret

Biotechnol Biofuels. 2019; 12: 208. Published online 2019 Sep 3. doi: 10.1186/s13068-019-1549-x

PMCID:: PMC6720390

Abstract Article PDF–1.7M

Select item 669783311.

Optimization of the Cellulase Free Xylanase Production by Immobilized Bacillus Pumilus

Aditi Kundu, Bijan Majumdar

Iran J Biotechnol. 2018 Dec; 16(4): e1658. Published online 2018 Dec 12. doi: 10.21859/ijb.1658

PMCID:: PMC6697833

Abstract Article PDF–321K

Select item 664907212.

Biochemical Characterization of the α-l-Rhamnosidase DtRha from Dictyoglomus thermophilum: Application to the Selective Derhamnosylation of Natural Flavonoids

Laure Guillotin, Hyuna Kim, Yasmina Traore, Philippe Moreau, Pierre Lafite, Véronique Coquoin, Sylvie Nuccio, René de Vaumas, Richard Daniellou

ACS Omega. 2019 Jan 31; 4(1): 1916–1922. Published online 2019 Jan 24. doi: 10.1021/acsomega.8b03186

PMCID:: PMC6649072

Abstract Article PDF–2.0M

Select item 662755713.

A Novel PL9 Pectate Lyase from Paenibacillus polymyxa KF-1: Cloning, Expression, and Its Application in Pectin Degradation

Ye Yuan, Xin-Yu Zhang, Yan Zhao, Han Zhang, Yi-Fa Zhou, Juan Gao

Int J Mol Sci. 2019 Jun; 20(12): 3060. Published online 2019 Jun 22. doi: 10.3390/ijms20123060

PMCID:: PMC6627557

Abstract Article PDF–15M

Select item 661449414.

Molecular and Biochemical Characterization of a Bimodular Xylanase From Marinifilaceae Bacterium Strain SPP2

Zhenggang Han, Fang Shang-guan, Jiangke Yang

Front Microbiol. 2019; 10: 1507. Published online 2019 Jul 2. doi: 10.3389/fmicb.2019.01507

PMCID:: PMC6614494

Abstract Article PDF–4.9M

Select item 655601915.

The extracellular endo-β-1,4-xylanase with multidomain from the extreme thermophile Caldicellulosiruptor lactoaceticus is specific for insoluble xylan degradation

Xiaojing Jia, Yejun Han

Biotechnol Biofuels. 2019; 12: 143. Published online 2019 Jun 8. doi: 10.1186/s13068-019-1480-1

PMCID:: PMC6556019

Abstract Article PDF–1.3M

Select item 653181816.

Development of Recombinant Protein-Based Vaccine Against Classical Swine Fever Virus in Pigs Using Transgenic Nicotiana benthamiana

Youngmin Park, Dong-Jun An, SeEun Choe, Yongjik Lee, Minhee Park, Soohong Park, Sungmin Gu, Kyungmin Min, Nam Hyung Kim, Sangmin Lee, Jong Kook Kim, Hye-Yeon Kim, Eun-Ju Sohn, Inhwan Hwang

Front Plant Sci. 2019; 10: 624. Published online 2019 May 16. doi: 10.3389/fpls.2019.00624

PMCID:: PMC6531818

Abstract Article PDF–3.2M

Select item 645595017.

An F-type lectin domain directs the activity of Streptosporangium roseum alpha-l-fucosidase

Ritika Bishnoi, Sonal Mahajan, T N C Ramya

Glycobiology. 2018 Nov; 28(11): 860–875. Published online 2018 Aug 30. doi: 10.1093/glycob/cwy079

PMCID:: PMC6455950

Abstract Article PDF–992K

Select item 630531118.

Expression and Characteristics of Two Glucose-Tolerant GH1 β-glucosidases From Actinomadura amylolytica YIM 77502^T for Promoting Cellulose Degradation

Yi-Rui Yin, Peng Sang, Wen-Dong Xian, Xin Li, Jian-Yu Jiao, Lan Liu, Wael N. Hozzein, Min Xiao, Wen-Jun Li

Front Microbiol. 2018; 9: 3149. Published online 2018 Dec 18. doi: 10.3389/fmicb.2018.03149

PMCID:: PMC6305311

Abstract Article PDF–1.2M

Select item 628589019.

PSI-36 Taxonomic and functional assessment reveals specific rumen microbial species and gene families associated with feed efficiency in Angus cattle.

A Neves, K Lê Cao, S Mandal, T Sharpton, T McAllister, L Guan

J Anim Sci. 2018 Dec; 96(Suppl 3): 190–191. Published online 2018 Dec 7. doi: 10.1093/jas/sky404.413

PMCID:: PMC6285890

Abstract PDF–57K

Select item 627851420.

Pretreatment of Lignocellulosic Materials as Substrates for Fermentation Processes

Karolina Kucharska, Piotr Rybarczyk, Iwona Hołowacz, Rafał Łukajtis, Marta Glinka, Marian Kamiński

Molecules. 2018 Nov; 23(11): 2937. Published online 2018 Nov 10. doi: 10.3390/molecules23112937

PMCID:: PMC6278514

Abstract Article PDF–374K

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PMC Links for Taxonomy (Select 1510) (158)
PMC
carbohydrate sulfotransferase 1 isoform X1 [Mus musculus]
carbohydrate sulfotransferase 1 isoform X1 [Mus musculus]
gi|1720401163|ref|XP_030108063.1|

Protein
Maylandia zebra isolate #2_Kocher and #3_Kocher ecotype Mazinzi reef linkage gro...
Maylandia zebra isolate #2_Kocher and #3_Kocher ecotype Mazinzi reef linkage group LG19, M_zebra_UMD2a, whole genome shotgun sequence
gi|1379045977|gnl|ASM:GCF_000238965 |ref|NC_036798.1||gpp|GPC_000003786.1||gnl|NCBI_GENOMES|75208

Nucleotide
Maylandia zebra isolate #2_Kocher and #3_Kocher ecotype Mazinzi reef linkage gro...
Maylandia zebra isolate #2_Kocher and #3_Kocher ecotype Mazinzi reef linkage group LG13, whole genome shotgun sequence
gi|1376007794|gb|CM009192.2||gnl|WG A|lg13

Nucleotide
Maylandia zebra isolate #2_Kocher and #3_Kocher ecotype Mazinzi reef linkage gro...
Maylandia zebra isolate #2_Kocher and #3_Kocher ecotype Mazinzi reef linkage group LG1, whole genome shotgun sequence
gi|1376007807|gb|CM009180.2||gnl|WG A|lg1

Nucleotide

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