PMC Links for Protein (Select 74735411) - PMC

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Select item 58269261.

VIRMA mediates preferential m⁶A mRNA methylation in 3′UTR and near stop codon and associates with alternative polyadenylation

Yanan Yue, Jun Liu, Xiaolong Cui, Jie Cao, Guanzheng Luo, Zezhou Zhang, Tao Cheng, Minsong Gao, Xiao Shu, Honghui Ma, Fengqin Wang, Xinxia Wang, Bin Shen, Yizhen Wang, Xinhua Feng, Chuan He, Jianzhao Liu

Cell Discov. 2018; 4: 10. Published online 2018 Feb 27. doi: 10.1038/s41421-018-0019-0

PMCID:: PMC5826926

Abstract Article PDF–2.3M

Select item 57561212.

Molecular mechanisms for CFIm-mediated regulation of mRNA alternative polyadenylation

Yong Zhu, Xiuye Wang, Elmira Forouzmand, Joshua Jeong, Feng Qiao, Gregory A. Sowd, Alan N. Engelman, Xiaohui Xie, Klemens J. Hertel, Yongsheng Shi

Mol Cell. Author manuscript; available in PMC 2019 Jan 4.

Published in final edited form as: Mol Cell. 2018 Jan 4; 69(1): 62–74.e4. Published online 2017 Dec 21. doi: 10.1016/j.molcel.2017.11.031

PMCID:: PMC5756121

Abstract Article PDF–2.4M

Select item 38796283.

Immunoaffinity Enrichment and Mass Spectrometry Analysis of Protein Methylation

Ailan Guo, Hongbo Gu, Jing Zhou, Daniel Mulhern, Yi Wang, Kimberly A. Lee, Vicky Yang, Mike Aguiar, Jon Kornhauser, Xiaoying Jia, Jianmin Ren, Sean A. Beausoleil, Jeffrey C. Silva, Vidyasiri Vemulapalli, Mark T. Bedford, Michael J. Comb

Mol Cell Proteomics. 2014 Jan; 13(1): 372–387. Published online 2013 Oct 15. doi: 10.1074/mcp.O113.027870

PMCID:: PMC3879628

Abstract Article PDF–4.1M

Select item 30568994.

Crystal structure of a human cleavage factor CFI_m25/CFI_m68/RNA complex provides an insight into poly(A) site recognition and RNA looping

Qin Yang, Molly Coseno, Gregory M. Gilmartin, Sylvie Doublié

Structure. Author manuscript; available in PMC 2012 Mar 9.

Published in final edited form as: Structure. 2011 Mar 9; 19(3): 368–377. Published online 2011 Feb 3. doi: 10.1016/j.str.2010.12.021

PMCID:: PMC3056899

Abstract Article PDF–1.9M

Select item 30395705.

Initial characterization of the human central proteome

Thomas R Burkard, Melanie Planyavsky, Ines Kaupe, Florian P Breitwieser, Tilmann Bürckstümmer, Keiryn L Bennett, Giulio Superti-Furga, Jacques Colinge

BMC Syst Biol. 2011; 5: 17. Published online 2011 Jan 26. doi: 10.1186/1752-0509-5-17

PMCID:: PMC3039570

Abstract Article PDF–2.3M

Select item 28904936.

Structural basis of UGUA recognition by the Nudix protein CFI_m25 and implications for a regulatory role in mRNA 3′ processing

Qin Yang, Gregory M. Gilmartin, Sylvie Doublié

Proc Natl Acad Sci U S A. 2010 Jun 1; 107(22): 10062–10067. Published online 2010 May 17. doi: 10.1073/pnas.1000848107

PMCID:: PMC2890493

Abstract Article PDF–1.8M

Select item 27932967.

Mammalian pre-mRNA 3′ End Processing Factor CF I_m68 Functions in mRNA Export

Marc-David Ruepp, Chiara Aringhieri, Silvia Vivarelli, Stefano Cardinale, Simona Paro, Daniel Schümperli, Silvia M.L. Barabino

Mol Biol Cell. 2009 Dec 15; 20(24): 5211–5223. doi: 10.1091/mbc.E09-05-0389

PMCID:: PMC2793296

Abstract Article PDF–1.9M

Select item 24254708.

Crystal structure of the 25 kDa subunit of human cleavage factor I_m

Molly Coseno, Georges Martin, Christopher Berger, Gregory Gilmartin, Walter Keller, Sylvie Doublié

Nucleic Acids Res. 2008 Jun; 36(10): 3474–3483. Published online 2008 Apr 29. doi: 10.1093/nar/gkn079

PMCID:: PMC2425470

Abstract Article PDF–753K

Select item 22136769.

The full-ORF clone resource of the German cDNA Consortium

Stephanie Bechtel, Heiko Rosenfelder, Anny Duda, Christian Peter Schmidt, Ute Ernst, Ruth Wellenreuther, Alexander Mehrle, Claudia Schuster, Andre Bahr, Helmut Blöcker, Dagmar Heubner, Andreas Hoerlein, Guenter Michel, Holger Wedler, Karl Köhrer, Birgit Ottenwälder, Annemarie Poustka, Stefan Wiemann, Ingo Schupp

BMC Genomics. 2007; 8: 399. Published online 2007 Oct 31. doi: 10.1186/1471-2164-8-399

PMCID:: PMC2213676

Abstract Article PDF–939K

Select item 166974310.

Knock-down of 25 kDa subunit of cleavage factor Im in Hela cells alters alternative polyadenylation within 3′-UTRs

Tomohiro Kubo, Tadashi Wada, Yuki Yamaguchi, Akira Shimizu, Hiroshi Handa

Nucleic Acids Res. 2006 Dec; 34(21): 6264–6271. Published online 2006 Nov 10. doi: 10.1093/nar/gkl794

PMCID:: PMC1669743

Abstract Article PDF–320K

Select item 161810711.

An interaction between U2AF 65 and CF I_m links the splicing and 3′ end processing machineries

Stefania Millevoi, Clarisse Loulergue, Sabine Dettwiler, Sarah Zeïneb Karaa, Walter Keller, Michael Antoniou, Stéphan Vagner

EMBO J. 2006 Oct 18; 25(20): 4854–4864. Published online 2006 Oct 5. doi: 10.1038/sj.emboj.7601331

PMCID:: PMC1618107

Abstract Article PDF–280K

Select item 128706112.

Association of polyadenylation cleavage factor I with U1 snRNP

SITA AWASTHI, JAMES C. ALWINE

RNA. 2003 Nov; 9(11): 1400–1409. doi: 10.1261/rna.5104603

PMCID:: PMC1287061

Abstract Article PDF–293K

Select item 114255513.

Analysis of a noncanonical poly(A) site reveals a tripartite mechanism for vertebrate poly(A) site recognition

Krishnan Venkataraman, Kirk M. Brown, Gregory M. Gilmartin

Genes Dev. 2005 Jun 1; 19(11): 1315–1327. doi: 10.1101/gad.1298605

PMCID:: PMC1142555

Abstract Article PDF–797K

Select item 52892814.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 601820815.

Life and Death of mRNA Molecules in Entamoeba histolytica

Jesús Valdés-Flores, Itzel López-Rosas, César López-Camarillo, Esther Ramírez-Moreno, Juan D. Ospina-Villa, Laurence A. Marchat

Front Cell Infect Microbiol. 2018; 8: 199. Published online 2018 Jun 19. doi: 10.3389/fcimb.2018.00199

PMCID:: PMC6018208

Abstract Article PDF–1.1M

Select item 591332016.

Acetylome in Human Fibroblasts From Parkinson's Disease Patients

Sokhna M. S. Yakhine-Diop, Mario Rodríguez-Arribas, Guadalupe Martínez-Chacón, Elisabet Uribe-Carretero, Rubén Gómez-Sánchez, Ana Aiastui, Adolfo López de Munain, José M. Bravo-San Pedro, Mireia Niso-Santano, Rosa A. González-Polo, José M. Fuentes

Front Cell Neurosci. 2018; 12: 97. Published online 2018 Apr 17. doi: 10.3389/fncel.2018.00097

PMCID:: PMC5913320

Abstract Article PDF–1.0M

Select item 589026617.

Targeting the polyadenylation factor EhCFIm25 with RNA aptamers controls survival in Entamoeba histolytica

Juan David Ospina-Villa, Alexandre Dufour, Christian Weber, Esther Ramirez-Moreno, Absalom Zamorano-Carrillo, Nancy Guillen, César Lopez-Camarillo, Laurence A. Marchat

Sci Rep. 2018; 8: 5720. Published online 2018 Apr 9. doi: 10.1038/s41598-018-23997-w