PMC Links for Nucleotide (Select 66043271) - PMC

Result Filters

Links from Nucleotide

Items: 1 to 20 of 38

<< First< Prev

Page of 2

Select item 11824591.

Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000

Helene Feil, William S. Feil, Patrick Chain, Frank Larimer, Genevieve DiBartolo, Alex Copeland, Athanasios Lykidis, Stephen Trong, Matt Nolan, Eugene Goltsman, James Thiel, Stephanie Malfatti, Joyce E. Loper, Alla Lapidus, John C. Detter, Miriam Land, Paul M. Richardson, Nikos C. Kyrpides, Natalia Ivanova, Steven E. Lindow

Proc Natl Acad Sci U S A. 2005 Aug 2; 102(31): 11064–11069. Published online 2005 Jul 25. doi: 10.1073/pnas.0504930102

PMCID:: PMC1182459

Abstract Article PDF–588K

Select item 69072552.

Transcriptomic analyses reveal physiological changes in sweet orange roots affected by citrus blight

Shimin Fu, Jonathan Shao, Avijit Roy, Ronald H. Brlansky, Changyong Zhou, John S. Hartung

BMC Genomics. 2019; 20: 969. Published online 2019 Dec 11. doi: 10.1186/s12864-019-6339-0

PMCID:: PMC6907255

Abstract Article PDF–1.3M

Select item 67496513.

Satellites in the prokaryote world

Juan A. Subirana, Xavier Messeguer

BMC Evol Biol. 2019; 19: 181. Published online 2019 Sep 18. doi: 10.1186/s12862-019-1504-2

PMCID:: PMC6749651

Abstract Article PDF–702K

Select item 64981484.

Pleiotropic Effects of c-di-GMP Content in Pseudomonas syringae

Tingting Wang, Zhao Cai, Xiaolong Shao, Weitong Zhang, Yingpeng Xie, Yingchao Zhang, Canfeng Hua, Stephan C. Schuster, Liang Yang, Xin Deng

Appl Environ Microbiol. 2019 May 15; 85(10): e00152-19. Prepublished online 2019 Mar 8. Published online 2019 May 2. doi: 10.1128/AEM.00152-19

PMCID:: PMC6498148

Abstract Article PDF–3.1M

Select item 64120555.

Genomic analysis of bacteria in the Acute Oak Decline pathobiome

James Doonan, Sandra Denman, Justin A. Pachebat, James E. McDonald

Microb Genom. 2019 Jan; 5(1): e000240. Published online 2019 Jan 8. doi: 10.1099/mgen.0.000240

PMCID:: PMC6412055

Abstract Article PDF–2.3M

Select item 63905076.

Inference of Convergent Gene Acquisition Among Pseudomonas syringae Strains Isolated From Watermelon, Cantaloupe, and Squash

Eric A. Newberry, Mohamed Ebrahim, Sujan Timilsina, Nevena Zlatković, Aleksa Obradović, Carolee T. Bull, Erica M. Goss, Jose C. Huguet-Tapia, Mathews L. Paret, Jeffrey B. Jones, Neha Potnis

Front Microbiol. 2019; 10: 270. Published online 2019 Feb 19. doi: 10.3389/fmicb.2019.00270

Correction in:: Front Microbiol. 2019; 10: 963.

PMCID:: PMC6390507

Abstract Article PDF–4.8M

Select item 63283657.

The Pseudomonas aeruginosa Pan-Genome Provides New Insights on Its Population Structure, Horizontal Gene Transfer, and Pathogenicity

Luca Freschi, Antony T Vincent, Julie Jeukens, Jean-Guillaume Emond-Rheault, Irena Kukavica-Ibrulj, Marie-Josée Dupont, Steve J Charette, Brian Boyle, Roger C Levesque

Genome Biol Evol. 2019 Jan; 11(1): 109–120. Published online 2018 Nov 29. doi: 10.1093/gbe/evy259

PMCID:: PMC6328365

Abstract Article PDF–589K

Select item 61821338.

The primary transcriptome, small RNAs and regulation of antimicrobial resistance in Acinetobacter baumannii ATCC 17978

Carsten Kröger, Keith D MacKenzie, Ebtihal Y Alshabib, Morgan W B Kirzinger, Danae M Suchan, Tzu-Chiao Chao, Valentyna Akulova, Aleksandra A Miranda-CasoLuengo, Vivian A Monzon, Tyrrell Conway, Sathesh K Sivasankaran, Jay C D Hinton, Karsten Hokamp, Andrew D S Cameron

Nucleic Acids Res. 2018 Oct 12; 46(18): 9684–9698. Published online 2018 Jul 9. doi: 10.1093/nar/gky603

PMCID:: PMC6182133

Abstract Article PDF–5.0M

Select item 54053489.

Mining of Microbial Genomes for the Novel Sources of Nitrilases

Nikhil Sharma, Neerja Thakur, Tilak Raj, Savitri, Tek Chand Bhalla

Biomed Res Int. 2017; 2017: 7039245. Published online 2017 Apr 12. doi: 10.1155/2017/7039245

PMCID:: PMC5405348

Abstract Article PDF–700K

Select item 468317810.

Gene Expression Profiling in Viable but Nonculturable (VBNC) Cells of Pseudomonas syringae pv. syringae

Olga A. Postnikova, Jonathan Shao, Norton M. Mock, Con J. Baker, Lev G. Nemchinov

Front Microbiol. 2015; 6: 1419. Published online 2015 Dec 18. doi: 10.3389/fmicb.2015.01419

PMCID:: PMC4683178

Abstract Article PDF–1.7M

Select item 466742411.

Complete genome of Pseudomonas chlororaphis strain UFB2, a soil bacterium with antibacterial activity against bacterial canker pathogen of tomato

Peng Deng, Xiaoqiang Wang, Sonya M. Baird, Shi-En Lu

Stand Genomic Sci. 2015; 10: 117. Published online 2015 Dec 1. doi: 10.1186/s40793-015-0106-x

PMCID:: PMC4667424

Abstract Article PDF–1.3M

Select item 455445212.

Comparative genomics of Pseudomonas syringae pv. syringae strains B301D and HS191 and insights into intrapathovar traits associated with plant pathogenesis

Aravind Ravindran, Neha Jalan, Joshua S Yuan, Nian Wang, Dennis C Gross

Microbiologyopen. 2015 Aug; 4(4): 553–573. Published online 2015 May 4. doi: 10.1002/mbo3.261

PMCID:: PMC4554452

Abstract Article PDF–1.7M

Select item 449258413.

Comparative Genomic Analyses of Multiple Pseudomonas Strains Infecting Corylus avellana Trees Reveal the Occurrence of Two Genetic Clusters with Both Common and Distinctive Virulence and Fitness Traits

Simone Marcelletti, Marco Scortichini

PLoS One. 2015; 10(7): e0131112. Published online 2015 Jul 6. doi: 10.1371/journal.pone.0131112

PMCID:: PMC4492584

Abstract Article PDF–2.7M

Select item 445967714.

Light-weight reference-based compression of FASTQ data

Yongpeng Zhang, Linsen Li, Yanli Yang, Xiao Yang, Shan He, Zexuan Zhu

BMC Bioinformatics. 2015; 16(1): 188. Published online 2015 Jun 9. doi: 10.1186/s12859-015-0628-7

PMCID:: PMC4459677

Abstract Article PDF–963K

Select item 445351515.

Nonribosomal Peptides, Key Biocontrol Components for Pseudomonas fluorescens In5, Isolated from a Greenlandic Suppressive Soil

Charlotte F. Michelsen, Jeramie Watrous, Mikkel A. Glaring, Roland Kersten, Nobuhiro Koyama, Pieter C. Dorrestein, Peter Stougaard

mBio. 2015 Mar-Apr; 6(2): e00079-15. Published online 2015 Mar 17. doi: 10.1128/mBio.00079-15

PMCID:: PMC4453515

Abstract Article PDF–1.3M

Select item 423442216.

Pseudomonas aeruginosa clinical and environmental isolates constitute a single population with high phenotypic diversity

María-Victoria Grosso-Becerra, Christian Santos-Medellín, Abigail González-Valdez, José-Luis Méndez, Gabriela Delgado, Rosario Morales-Espinosa, Luis Servín-González, Luis-David Alcaraz, Gloria Soberón-Chávez

BMC Genomics. 2014; 15: 318. Published online 2014 Apr 28. doi: 10.1186/1471-2164-15-318

PMCID:: PMC4234422

Abstract Article PDF–1.1M

Select item 402217817.

Safety in numbers: multiple occurrences of highly similar homologs among Azotobacter vinelandii carbohydrate metabolism proteins probably confer adaptive benefits

Mali Mærk, Jostein Johansen, Helga Ertesvåg, Finn Drabløs, Svein Valla

BMC Genomics. 2014; 15(1): 192. Published online 2014 Mar 14. doi: 10.1186/1471-2164-15-192

PMCID:: PMC4022178

Abstract Article PDF–1.1M

Select item 390165218.

Pseudomonas putida CSV86: A Candidate Genome for Genetic Bioaugmentation

Vasundhara Paliwal, Sajan C. Raju, Arnab Modak, Prashant S. Phale, Hemant J. Purohit

PLoS One. 2014; 9(1): e84000. Published online 2014 Jan 24. doi: 10.1371/journal.pone.0084000

PMCID:: PMC3901652

Abstract Article PDF–1.2M

Select item 378342319.

A Genomic Redefinition of Pseudomonas avellanae species

Marco Scortichini, Simone Marcelletti, Patrizia Ferrante, Giuseppe Firrao

PLoS One. 2013; 8(9): e75794. Published online 2013 Sep 25. doi: 10.1371/journal.pone.0075794

PMCID:: PMC3783423

Abstract Article PDF–2.0M

Select item 373988620.

When Outgroups Fail; Phylogenomics of Rooting the Emerging Pathogen, Coxiella burnetii

Talima Pearson, Heidie M. Hornstra, Jason W. Sahl, Sarah Schaack, James M. Schupp, Stephen M. Beckstrom-Sternberg, Matthew W. O'Neill, Rachael A. Priestley, Mia D. Champion, James S. Beckstrom-Sternberg, Gilbert J. Kersh, James E. Samuel, Robert F. Massung, Paul Keim

Syst Biol. 2013 Sep; 62(5): 752–762. Published online 2013 Jul 22. doi: 10.1093/sysbio/syt038