PMC Links for Nucleotide (Select 41821838) - PMC

Select item 3974611.

Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes

Rekha Seshadri, Garry S. A. Myers, Hervé Tettelin, Jonathan A. Eisen, John F. Heidelberg, Robert J. Dodson, Tanja M. Davidsen, Robert T. DeBoy, Derrick E. Fouts, Dan H. Haft, Jeremy Selengut, Qinghu Ren, Lauren M. Brinkac, Ramana Madupu, Jamie Kolonay, Scott A. Durkin, Sean C. Daugherty, Jyoti Shetty, Alla Shvartsbeyn, Elizabeth Gebregeorgis, Keita Geer, Getahun Tsegaye, Joel Malek, Bola Ayodeji, Sofiya Shatsman, Michael P. McLeod, David Šmajs, Jerrilyn K. Howell, Sangita Pal, Anita Amin, Pankaj Vashisth, Thomas Z. McNeill, Qin Xiang, Erica Sodergren, Ernesto Baca, George M. Weinstock, Steven J. Norris, Claire M. Fraser, Ian T. Paulsen

Proc Natl Acad Sci U S A. 2004 Apr 13; 101(15): 5646–5651. Published online 2004 Apr 2. doi: 10.1073/pnas.0307639101

PMCID:: PMC397461

Abstract Article PDF–491K

Select item 70482802.

Development of Oral Care Chip, a novel device for quantitative detection of the oral microbiota associated with periodontal disease

Ai Nozawa, Hiroyuki Oshima, Naoyuki Togawa, Takenori Nozaki, Shinya Murakami

PLoS One. 2020; 15(2): e0229485. Published online 2020 Feb 28. doi: 10.1371/journal.pone.0229485

PMCID:: PMC7048280

Abstract Article PDF–943K

Select item 60849963.

The occurrence of Treponema spp. in gingival plaque from dogs with varying degree of periodontal disease

Janna Nises, Anna Rosander, Ann Pettersson, Annette Backhans

PLoS One. 2018; 13(8): e0201888. Published online 2018 Aug 9. doi: 10.1371/journal.pone.0201888

PMCID:: PMC6084996

Abstract Article PDF–1.5M

Select item 55527024.

Quantification by qPCR of Pathobionts in Chronic Periodontitis: Development of Predictive Models of Disease Severity at Site-Specific Level

Inmaculada Tomás, Alba Regueira-Iglesias, Maria López, Nora Arias-Bujanda, Lourdes Novoa, Carlos Balsa-Castro, Maria Tomás

Front Microbiol. 2017; 8: 1443. Published online 2017 Aug 9. doi: 10.3389/fmicb.2017.01443

PMCID:: PMC5552702

Abstract Article PDF–3.0M

Select item 46631215.

Fibronectin-binding protein TDE1579 affects cytotoxicity of Treponema denticola

Xiaoping Xu, Bjorn Steffensen, Trista K. Robichaud, Margarita Mikhailova, Veronica Lai, Ryan Montgomery, Lianrui Chu

Anaerobe. Author manuscript; available in PMC 2016 Dec 1.

Published in final edited form as: Anaerobe. 2015 Dec; 36: 39–48. Published online 2015 Oct 9. doi: 10.1016/j.anaerobe.2015.09.010

PMCID:: PMC4663121

Abstract Article PDF–1.2M

Select item 45622846.

Conservation and revised annotation of the Treponema denticola prcB-prcA-prtP locus encoding the dentilisin (CTLP) protease complex

M. Paula Goetting-Minesky, Valentina Godovikova, Jiean J. Li, Suchithra Seshadrinathan, John C. Timm, Shalini S. Kamodia, J. Christopher Fenno

Mol Oral Microbiol. Author manuscript; available in PMC 2015 Sep 8.

Published in final edited form as: Mol Oral Microbiol. 2013 Jun; 28(3): 181–191. Published online 2012 Dec 17. doi: 10.1111/omi.12013

PMCID:: PMC4562284

Abstract Article PDF–347K

Select item 41658177.

The Treponema denticola AtcR LytTR domain-containing response regulator interacts with three architecturally distinct promoter elements: implications for understanding the molecular signaling mechanisms that drive the progression of periodontal disease

Daniel P. Miller, Jesse R. Frederick, Juni Sarkar, Richard T. Marconi

Mol Oral Microbiol. Author manuscript; available in PMC 2015 Oct 1.

Published in final edited form as: Mol Oral Microbiol. 2014 Oct; 29(5): 219–232. Published online 2014 Jul 24. doi: 10.1111/omi.12059

PMCID:: PMC4165817

Abstract Article PDF–1.8M

Select item 40624768.

Metagenomic Analysis Reveals Presence of Treponema denticola in a Tissue Biopsy of the Iceman

Frank Maixner, Anton Thomma, Giovanna Cipollini, Stefanie Widder, Thomas Rattei, Albert Zink

PLoS One. 2014; 9(6): e99994. Published online 2014 Jun 18. doi: 10.1371/journal.pone.0099994

PMCID:: PMC4062476

Abstract Article PDF–1.6M

Select item 38379949.

Periodontal Treatment Downregulates Protease-Activated Receptor 2 in Human Gingival Crevicular Fluid Cells

Vanessa Tubero Euzebio Alves, Henrique Aparecido Bueno da Silva, Bruno Nunes de França, Rosangela Santos Eichler, Luciana Saraiva, Maria Helena Catelli de Carvalho, Marinella Holzhausen

Infect Immun. 2013 Dec; 81(12): 4399–4407. doi: 10.1128/IAI.01107-13

Correction in:: Infect Immun. 2014 Mar; 82(3): 1354.

PMCID:: PMC3837994

Abstract Article PDF–634K

Select item 374714310.

Olov Svartström, Memoona Mushtaq, Märit Pringle, Bo Segerman

PLoS One. 2013; 8(8): e71281. Published online 2013 Aug 19. doi: 10.1371/journal.pone.0071281

PMCID:: PMC3747143

Abstract Article PDF–478K

Select item 353238611.

Optimization of quantitative polymerase chain reactions for detection and quantification of eight periodontal bacterial pathogens

Ellen Decat, Jan Cosyn, Hugo De Bruyn, Reza Miremadi, Bart Saerens, Els Van Mechelen, Stefan Vermeulen, Mario Vaneechoutte, Pieter Deschaght

BMC Res Notes. 2012; 5: 664. Published online 2012 Dec 2. doi: 10.1186/1756-0500-5-664

PMCID:: PMC3532386

Abstract Article PDF–462K

Select item 346078112.

Leptospira spp. strain identification by MALDI TOF MS is an equivalent tool to 16S rRNA gene sequencing and multi locus sequence typing (MLST)

Anna Rettinger, Inke Krupka, Karola Grünwald, Viktor Dyachenko, Volker Fingerle, Regina Konrad, Heribert Raschel, Ulrich Busch, Andreas Sing, Reinhard K Straubinger, Ingrid Huber

BMC Microbiol. 2012; 12: 185. Published online 2012 Aug 27. doi: 10.1186/1471-2180-12-185

PMCID:: PMC3460781

Abstract Article PDF–1.1M

Select item 225462613.

Characterization of a filamentous biofilm community established in a cellulose-fed microbial fuel cell

Shun'ichi Ishii, Takefumi Shimoyama, Yasuaki Hotta, Kazuya Watanabe

BMC Microbiol. 2008; 8: 6. Published online 2008 Jan 10. doi: 10.1186/1471-2180-8-6

PMCID:: PMC2254626

Abstract Article PDF–861K

Select item 124221414.

A computational method to predict genetically encoded rare amino acids in proteins

Barnali N Chaudhuri, Todd O Yeates

Genome Biol. 2005; 6(9): R79. Published online 2005 Aug 31. doi: 10.1186/gb-2005-6-9-r79

PMCID:: PMC1242214

Abstract Article PDF–1.0M

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