PMC Links for Nucleotide (Select 330443681) - PMC

Select item 66157101.

The nucleotide sequence of Saccharomyces cerevisiae chromosome XII

M. Johnston, L. Hillier, L. Riles, other members of the Genome Sequencing Center, K. Albermann, B. André, W. Ansorge, V. Benes, M. Brückner, H. Delius, E. Dubois, A. Düsterhöft, K.-D. Entian, M. Floeth, A. Goffeau, U. Hebling, K. Heumann, D. Heuss-Neitzel, H. Hilbert, F. Hilger, K. Kleine, P. Kötter, E. J. Louis, F. Messenguy, H. W. Mewes, T. Miosga, D. Möstl, S. Müller-Auer, U. Nentwich, B. Obermaier, E. Piravandi, T. M. Pohl, D. Portetelle, B. Purnelle, S. Rechmann, M. Rieger, M. Rinke, M. Rose, M. Scharfe, B. Scherens, P. Scholler, C. Schwager, S. Schwarz, A. P. Underwood, L. A. Urrestarazu, M. Vandenbol, P. Verhasselt, F. Vierendeels, M Voet, G. Volckaert, H. Voss, R. Wambutt, E. Wedler, H. Wedler, F. K. Zimmermann, A. Zollner, J. Hani, J. D. Hoheisel

Nature. Author manuscript; available in PMC 2019 Jul 9.

Published in final edited form as: Nature. 1997 May 29; 387(6632 Suppl): 87–90.

PMCID:: PMC6615710

Abstract Article PDF–424K

Select item 68235122.

Improved 18S and 28S rDNA primer sets for NGS-based parasite detection

Asuka Kounosu, Kazunori Murase, Akemi Yoshida, Haruhiko Maruyama, Taisei Kikuchi

Sci Rep. 2019; 9: 15789. Published online 2019 Oct 31. doi: 10.1038/s41598-019-52422-z

PMCID:: PMC6823512

Abstract Article PDF–1.3M

Select item 64278703.

Modulation of acetate utilization in Komagataella phaffii by metabolic engineering of tolerance and metabolism

Qin Xu, Chenxiao Bai, Yiqi Liu, Lili Song, Lin Tian, Yunfeng Yan, Jinfeng Zhou, Xiangshan Zhou, Yuanxing Zhang, Menghao Cai

Biotechnol Biofuels. 2019; 12: 61. Published online 2019 Mar 21. doi: 10.1186/s13068-019-1404-0

PMCID:: PMC6427870

Abstract Article PDF–3.8M

Select item 59607174.

Saccharomyces cerevisiae Differential Functionalization of Presumed ScALT1 and ScALT2 Alanine Transaminases Has Been Driven by Diversification of Pyridoxal Phosphate Interactions

Erendira Rojas-Ortega, Beatriz Aguirre-López, Horacio Reyes-Vivas, Martín González-Andrade, Jose C. Campero-Basaldúa, Juan P. Pardo, Alicia González

Front Microbiol. 2018; 9: 944. Published online 2018 May 14. doi: 10.3389/fmicb.2018.00944

PMCID:: PMC5960717

Abstract Article PDF–3.5M

Select item 54991295.

Whole-Genome Sequence and Variant Analysis of W303, a Widely-Used Strain of Saccharomyces cerevisiae

Kinnari Matheson, Lance Parsons, Alison Gammie

G3 (Bethesda) 2017 Jul; 7(7): 2219–2226. Published online 2017 Jun 5. doi: 10.1534/g3.117.040022

PMCID:: PMC5499129

Abstract Article PDF–1.5M

Select item 50633826.

Scarless Gene Tagging with One-Step Transformation and Two-Step Selection in Saccharomyces cerevisiae and Schizosaccharomyces pombe

Dirk Landgraf, Dann Huh, Erinc Hallacli, Susan Lindquist

PLoS One. 2016; 11(10): e0163950. Published online 2016 Oct 13. doi: 10.1371/journal.pone.0163950

PMCID:: PMC5063382

Abstract Article PDF–4.1M

Select item 47273107.

Extracting DNA words based on the sequence features: non-uniform distribution and integrity

Zhi Li, Hongyan Cao, Yuehua Cui, Yanbo Zhang

Theor Biol Med Model. 2016; 13: 2. Published online 2016 Jan 25. doi: 10.1186/s12976-016-0028-3

PMCID:: PMC4727310

Abstract Article PDF–785K

Select item 39650398.

Ribosomal Database Project: data and tools for high throughput rRNA analysis

James R. Cole, Qiong Wang, Jordan A. Fish, Benli Chai, Donna M. McGarrell, Yanni Sun, C. Titus Brown, Andrea Porras-Alfaro, Cheryl R. Kuske, James M. Tiedje

Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D633–D642. Published online 2013 Nov 27. doi: 10.1093/nar/gkt1244

PMCID:: PMC3965039

Abstract Article PDF–509K

Select item 39624799.

The Reference Genome Sequence of Saccharomyces cerevisiae: Then and Now

Stacia R. Engel, Fred S. Dietrich, Dianna G. Fisk, Gail Binkley, Rama Balakrishnan, Maria C. Costanzo, Selina S. Dwight, Benjamin C. Hitz, Kalpana Karra, Robert S. Nash, Shuai Weng, Edith D. Wong, Paul Lloyd, Marek S. Skrzypek, Stuart R. Miyasato, Matt Simison, J. Michael Cherry

G3 (Bethesda) 2014 Mar; 4(3): 389–398. Published online 2013 Dec 27. doi: 10.1534/g3.113.008995

PMCID:: PMC3962479

Abstract Article PDF–1006K

Select item 394616910.

Reliable differentiation of Meyerozyma guilliermondii from Meyerozyma caribbica by internal transcribed spacer restriction fingerprinting

Wahengbam Romi, Santosh Keisam, Giasuddin Ahmed, Kumaraswamy Jeyaram

BMC Microbiol. 2014; 14: 52. Published online 2014 Feb 28. doi: 10.1186/1471-2180-14-52

PMCID:: PMC3946169

Abstract Article PDF–2.3M

Select item 373716311.

Genomes of Ashbya Fungi Isolated from Insects Reveal Four Mating-Type Loci, Numerous Translocations, Lack of Transposons, and Distinct Gene Duplications

Fred S. Dietrich, Sylvia Voegeli, Sidney Kuo, Peter Philippsen

G3 (Bethesda) 2013 Aug; 3(8): 1225–1239. Published online 2013 Aug 1. doi: 10.1534/g3.112.002881

PMCID:: PMC3737163

Abstract Article PDF–1.8M

Select item 373496412.

Examining new phylogenetic markers to uncover the evolutionary history of early-diverging fungi: comparing MCM7, TSR1 and rRNA genes for single- and multi-gene analyses of the Kickxellomycotina

E.D. Tretter, E.M. Johnson, Y. Wang, P. Kandel, M.M. White

Persoonia. 2013 Jun; 30: 106–125. Published online 2013 Mar 20. doi: 10.3767/003158513X666394

PMCID:: PMC3734964

Abstract Article PDF–786K

Select item 368559013.

Two CDC42 paralogs modulate C. neoformans thermotolerance and morphogenesis under host physiological conditions

Elizabeth R. Ballou, Connie B. Nichols, Kathleen J Miglia, Lukasz Kozubowski, J. Andrew Alspaugh

Mol Microbiol. Author manuscript; available in PMC 2013 Jun 18.

Published in final edited form as: Mol Microbiol. 2010 Feb; 75(3): 763–780. Published online 2009 Dec 16. doi: 10.1111/j.1365-2958.2009.07019.x

PMCID:: PMC3685590

Abstract Article PDF–5.1M

Select item 333878614.

Factors That Affect Large Subunit Ribosomal DNA Amplicon Sequencing Studies of Fungal Communities: Classification Method, Primer Choice, and Error

Teresita M. Porter, G. Brian Golding

PLoS One. 2012; 7(4): e35749. Published online 2012 Apr 27. doi: 10.1371/journal.pone.0035749

Correction in:: PLoS One. 2012; 7(8): 10.1371/annotation/188edbe7-9f2e-4031-9155-d4a9337e6257.

PMCID:: PMC3338786

Abstract Article PDF–879K

Select item 324503415.

Saccharomyces Genome Database: the genomics resource of budding yeast

J. Michael Cherry, Eurie L. Hong, Craig Amundsen, Rama Balakrishnan, Gail Binkley, Esther T. Chan, Karen R. Christie, Maria C. Costanzo, Selina S. Dwight, Stacia R. Engel, Dianna G. Fisk, Jodi E. Hirschman, Benjamin C. Hitz, Kalpana Karra, Cynthia J. Krieger, Stuart R. Miyasato, Rob S. Nash, Julie Park, Marek S. Skrzypek, Matt Simison, Shuai Weng, Edith D. Wong

Nucleic Acids Res. 2012 Jan; 40(Database issue): D700–D705. Published online 2011 Nov 21. doi: 10.1093/nar/gkr1029

PMCID:: PMC3245034

Abstract Article PDF–103K

Select item 304012216.

Saccharomyces cerevisiae S288C genome annotation: a working hypothesis

Dianna G. Fisk, Catherine A. Ball, Kara Dolinski, Stacia R. Engel, Eurie L. Hong, Laurie Issel-Tarver, Katja Schwartz, Anand Sethuraman, David Botstein, J. Michael Cherry, The Saccharomyces Genome Database Project

Yeast. Author manuscript; available in PMC 2011 Feb 16.

Published in final edited form as: Yeast. 2006 Sep; 23(12): 857–865. doi: 10.1002/yea.1400

PMCID:: PMC3040122

Abstract Article PDF–122K

Select item 207548517.

Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes

Celine A Hayden, Richard A Jorgensen

BMC Biol. 2007; 5: 32. Published online 2007 Jul 30. doi: 10.1186/1741-7007-5-32

PMCID:: PMC2075485

Abstract Article PDF–1.1M

Select item 51536318.

The Growth-Regulatory Protein HCRP1/hVps37A Is a Subunit of Mammalian ESCRT-I and Mediates Receptor Down-Regulation

Kristi G. Bache, Thomas Slagsvold, Alicia Cabezas, Ken R. Rosendal, Camilla Raiborg, Harald Stenmark

Mol Biol Cell. 2004 Sep; 15(9): 4337–4346. doi: 10.1091/mbc.E04-03-0250

PMCID:: PMC515363

Abstract Article PDF–487K

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