PMC Links for GEO Profiles (Select 47422756) - PMC

Select item 101226561.

Siglec-6 mediates the uptake of extracellular vesicles through a noncanonical glycolipid binding pocket

Edward N. Schmidt, Dimitra Lamprinaki, Kelli A. McCord, Maju Joe, Mirat Sojitra, Ayk Waldow, Jasmine Nguyen, John Monyror, Elena N. Kitova, Fahima Mozaneh, Xue Yan Guo, Jaesoo Jung, Jhon R. Enterina, Gour C. Daskhan, Ling Han, Amanda R. Krysler, Christopher R. Cromwell, Basil P. Hubbard, Lori J. West, Marianne Kulka, Simonetta Sipione, John S. Klassen, Ratmir Derda, Todd L. Lowary, Lara K. Mahal, Meghan R. Riddell, Matthew S. Macauley

Nat Commun. 2023; 14: 2327. Published online 2023 Apr 22. doi: 10.1038/s41467-023-38030-6

PMCID:: PMC10122656

Abstract Article PDF–2.1M

Select item 96592672.

Siglec-6 Signaling Uses Src Kinase Tyrosine Phosphorylation and SHP-2 Recruitment

Adrianne L. Stefanski, Michael D. Renecle, Anita Kramer, Shilpi Sehgal, Purnima Narasimhan, Kristen K. Rumer, Virginia D Winn

Cells. 2022 Nov; 11(21): 3427. Published online 2022 Oct 29. doi: 10.3390/cells11213427

PMCID:: PMC9659267

Abstract Article PDF–1.7M

Select item 89978713.

Functional and Phenotypic Characterization of Siglec-6 on Human Mast Cells

Piper A. Robida, Clayton H. Rische, Netali Ben-Baruch Morgenstern, Rethavathi Janarthanam, Yun Cao, Rebecca A. Krier-Burris, Wouter Korver, Alan Xu, Thuy Luu, Julia Schanin, John Leung, Marc E. Rothenberg, Joshua B. Wechsler, Bradford A. Youngblood, Bruce S. Bochner, Jeremy A. O’Sullivan

Cells. 2022 Apr; 11(7): 1138. Published online 2022 Mar 28. doi: 10.3390/cells11071138

PMCID:: PMC8997871

Abstract Article PDF–1.8M

Select item 71699834.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 63865885.

The Functional Proximal Proteome of Oncogenic Ras Includes mTORC2

Joanna R. Kovalski, Aparna Bhaduri, Ashley M. Zehnder, Poornima H. Neela, Yonglu Che, Glenn G. Wozniak, Paul A. Khavari

Mol Cell. Author manuscript; available in PMC 2020 Feb 21.

Published in final edited form as: Mol Cell. 2019 Feb 21; 73(4): 830–844.e12. Published online 2019 Jan 10. doi: 10.1016/j.molcel.2018.12.001

PMCID:: PMC6386588

Abstract Article PDF–1.7M

Select item 61597416.

Functional Inhibitory Siglec-6 Is Upregulated in Human Colorectal Cancer-Associated Mast Cells

Yingxin Yu, Bart R. J. Blokhuis, Mara A. P. Diks, Ali Keshavarzian, Johan Garssen, Frank A. Redegeld

Front Immunol. 2018; 9: 2138. Published online 2018 Sep 20. doi: 10.3389/fimmu.2018.02138

PMCID:: PMC6159741

Abstract Article PDF–2.7M

Select item 42665887.

A proteome-scale map of the human interactome network

Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal

Cell. Author manuscript; available in PMC 2015 Nov 20.

Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050

PMCID:: PMC4266588

Abstract Article PDF–3.1M

Select item 42461028.

Lectin Galactoside-binding Soluble 3 Binding Protein (LGALS3BP) Is a Tumor-associated Immunomodulatory Ligand for CD33-related Siglecs

Heinz Läubli, Frederico Alisson-Silva, Michal A. Stanczak, Shoib S. Siddiqui, Liwen Deng, Andrea Verhagen, Nissi Varki, Ajit Varki

J Biol Chem. 2014 Nov 28; 289(48): 33481–33491. Published online 2014 Oct 15. doi: 10.1074/jbc.M114.593129

PMCID:: PMC4246102

Abstract Article PDF–3.0M

Select item 37098939.

Differentially Expressed Genes in the Pre-Eclamptic Placenta: A Systematic Review and Meta-Analysis

C. Emily Kleinrouweler, Miranda van Uitert, Perry D. Moerland, Carrie Ris-Stalpers, Joris A. M. van der Post, Gijs B. Afink

PLoS One. 2013; 8(7): e68991. Published online 2013 Jul 12. doi: 10.1371/journal.pone.0068991

PMCID:: PMC3709893

Abstract Article PDF–494K

Select item 367618910.

Siglec-6 Expression Is Increased in Placentas From Pregnancies Complicated by Preterm Preeclampsia

Kristen K. Rumer, Jill Uyenishi, M. Camille Hoffman, Barbra M. Fisher, Virginia D. Winn

Reprod Sci. 2013 Jun; 20(6): 646–653. doi: 10.1177/1933719112461185

PMCID:: PMC3676189

Abstract Article PDF–411K

Select item 350047111.

Siglec-6 is expressed in gestational trophoblastic disease and affects proliferation, apoptosis and invasion

Kristen K Rumer, Miriam D Post, Rhea S Larivee, Martina Zink, Jill Uyenishi, Anita Kramer, Deanna Teoh, Kevin Bogart, Virginia D Winn

Endocr Relat Cancer. 2012 Dec; 19(6): 827–840. Prepublished online 2012 Oct 22. doi: 10.1530/ERC-11-0379

PMCID:: PMC3500471

Abstract Article PDF–380K

Select item 319945912.

Glycodelin-A Protein Interacts with Siglec-6 Protein to Suppress Trophoblast Invasiveness by Down-regulating Extracellular Signal-regulated Kinase (ERK)/c-Jun Signaling Pathway

Kevin K. W. Lam, Philip C. N. Chiu, Cheuk-Lun Lee, Ronald T. K. Pang, Carmen O. N. Leung, Hannu Koistinen, Markku Seppala, Pak-Chung Ho, William S. B. Yeung

J Biol Chem. 2011 Oct 28; 286(43): 37118–37127. Published online 2011 Aug 31. doi: 10.1074/jbc.M111.233841

PMCID:: PMC3199459

Abstract Article PDF–1.9M

Select item 317805913.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 263090514.

Severe Preeclampsia-Related Changes in Gene Expression at the Maternal-Fetal Interface Include Sialic Acid-Binding Immunoglobulin-Like Lectin-6 and Pappalysin-2

Virginia D. Winn, Matthew Gormley, Agnes C. Paquet, Kasper Kjaer-Sorensen, Anita Kramer, Kristen K. Rumer, Ronit Haimov-Kochman, Ru-Fang Yeh, Michael T. Overgaard, Ajit Varki, Claus Oxvig, Susan J. Fisher

Endocrinology. 2009 Jan; 150(1): 452–462. Published online 2008 Sep 25. doi: 10.1210/en.2008-0990

PMCID:: PMC2630905

Abstract Article

Select item 135612915.

Diversification of transcriptional modulation: Large-scale identification and characterization of putative alternative promoters of human genes

Kouichi Kimura, Ai Wakamatsu, Yutaka Suzuki, Toshio Ota, Tetsuo Nishikawa, Riu Yamashita, Jun-ichi Yamamoto, Mitsuo Sekine, Katsuki Tsuritani, Hiroyuki Wakaguri, Shizuko Ishii, Tomoyasu Sugiyama, Kaoru Saito, Yuko Isono, Ryotaro Irie, Norihiro Kushida, Takahiro Yoneyama, Rie Otsuka, Katsuhiro Kanda, Takahide Yokoi, Hiroshi Kondo, Masako Wagatsuma, Katsuji Murakawa, Shinichi Ishida, Tadashi Ishibashi, Asako Takahashi-Fujii, Tomoo Tanase, Keiichi Nagai, Hisashi Kikuchi, Kenta Nakai, Takao Isogai, Sumio Sugano

Genome Res. 2006 Jan; 16(1): 55–65. doi: 10.1101/gr.4039406

PMCID:: PMC1356129

Abstract Article PDF–438K

Select item 13924116.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

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