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Items: 1 to 20 of 55

1.
Comprehensive proteomic characterization of stem cell-derived extracellular matrices
Héloïse Ragelle, Alexandra Naba, Benjamin L. Larson, Fangheng Zhou, Miralem Prijic, Charles A. Whittaker, Amanda Del Rosario, Robert Langer, Richard O. Hynes, Daniel G. Anderson
Biomaterials. Author manuscript; available in PMC 2021 Jun 10.
Published in final edited form as: Biomaterials. 2017 Jun; 128: 147–159. Published online 2017 Mar 7. doi: 10.1016/j.biomaterials.2017.03.008
PMCID:
PMC8191742
AbstractArticlePDF–1.5M
2.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
3.
Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics
Alexandra Naba, Oliver M. T. Pearce, Amanda Del Rosario, Duanduan Ma, Huiming Ding, Vinothini Rajeeve, Pedro R. Cutillas, Frances R. Balkwill, Richard O. Hynes
J Proteome Res. Author manuscript; available in PMC 2021 Apr 27.
Published in final edited form as: J Proteome Res. 2017 Aug 4; 16(8): 3083–3091. Published online 2017 Jul 19. doi: 10.1021/acs.jproteome.7b00191
PMCID:
PMC8078728
AbstractArticlePDF–2.1M
4.
A TNXB splice donor site variant as a cause of hypermobility type Ehlers–Danlos syndrome in patients with congenital adrenal hyperplasia
Qizong Lao, Ashwini Mallappa, Fabio Rueda Faucz, Elizabeth Joyal, Padmasree Veeraraghavan, Wuyan Chen, Deborah P. Merke
Mol Genet Genomic Med. 2021 Feb; 9(2): e1556. Published online 2020 Dec 17. doi: 10.1002/mgg3.1556
PMCID:
PMC8077117
AbstractArticlePDF–833K
5.
RIG-I regulates myeloid differentiation by promoting TRIM25-mediated ISGylation
Song-Fang Wu, Li Xia, Xiao-Dong Shi, Yu-Jun Dai, Wei-Na Zhang, Jun-Mei Zhao, Wu Zhang, Xiang-Qin Weng, Jing Lu, Huang-Ying Le, Sheng-ce Tao, Jiang Zhu, Zhu Chen, Yue-Ying Wang, Saijuan Chen
Proc Natl Acad Sci U S A. 2020 Jun 23; 117(25): 14395–14404. Published online 2020 Jun 8. doi: 10.1073/pnas.1918596117
PMCID:
PMC7322067
AbstractArticlePDF–2.7M
6.
Differential DNA methylation patterns in human Schlemm’s canal endothelial cells with glaucoma
Jingwen Cai, Michelle D. Drewry, Kristin Perkumas, W. Michael Dismuke, Michael A. Hauser, W. Daniel Stamer, Yutao Liu
Mol Vis. 2020; 26: 483–493. Published online 2020 Jun 26.
PMCID:
PMC7316632
AbstractArticlePDF–1.1M
7.
A reference map of the human binary protein interactome
Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood
Nature. Author manuscript; available in PMC 2020 Oct 8.
Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x
PMCID:
PMC7169983
AbstractArticlePDF–5.4M
8.
An Interaction Network of the Human SEPT9 Established by Quantitative Mass Spectrometry
Matthias Hecht, Reinhild Rösler, Sebastian Wiese, Nils Johnsson, Thomas Gronemeyer
G3 (Bethesda) 2019 Jun; 9(6): 1869–1880. Published online 2019 Apr 11. doi: 10.1534/g3.119.400197
PMCID:
PMC6553528
AbstractArticlePDF–2.9M
9.
Tenascin-X in amniotic fluid and reproductive tissues of pregnancies complicated by infection and preterm prelabor rupture of membranes
Kara M Rood, Catalin S Buhimschi, Guomao Zhao, Emily A Oliver, Taryn Summerfield, Mert Ozan Bahtiyar, Irina A Buhimschi
Biol Reprod. 2019 Mar; 100(3): 773–782. Published online 2018 Oct 2. doi: 10.1093/biolre/ioy216
PMCID:
PMC6437262
AbstractArticlePDF–8.0M
10.
A novel role for the extracellular matrix glycoprotein‐Tenascin‐X in gastric function
Rubina Aktar, Madusha Peiris, Asma Fikree, Simon Eaton, Stamatiki Kritas, Stephen J. Kentish, Eduardo J. A. Araujo, Cristiano Bacarin, Amanda J. Page, Nicol C. Voermans, Qasim Aziz, L. Ashley Blackshaw
J Physiol. 2019 Mar 15; 597(6): 1503–1515. Published online 2019 Jan 23. doi: 10.1113/JP277195
PMCID:
PMC6418764
AbstractArticlePDF–2.7M
11.
Whole-genome methylation profiling of the retinal pigment epithelium of individuals with age-related macular degeneration reveals differential methylation of the SKI, GTF2H4, and TNXB genes
Louise F. Porter, Neil Saptarshi, Yongxiang Fang, Sonika Rathi, Anneke I. den Hollander, Eiko K. de Jong, Simon J. Clark, Paul N. Bishop, Timothy W. Olsen, Triantafillos Liloglou, Venkata R. M. Chavali, Luminita Paraoan
Clin Epigenetics. 2019; 11: 6. Published online 2019 Jan 14. doi: 10.1186/s13148-019-0608-2
PMCID:
PMC6332695
AbstractArticlePDF–1.9M
12.
Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei
Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck
Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924
PMCID:
PMC6166682
AbstractArticlePDF–3.8M
13.
The extracellular matrix glycoprotein tenascin‐X regulates peripheral sensory and motor neurones
Rubina Aktar, Madusha Peiris, Asma Fikree, Vincent Cibert‐Goton, Maxim Walmsley, Iain R. Tough, Paulo Watanabe, Eduardo J. A. Araujo, Sahar D. Mohammed, Jean‐Marie Delalande, David C. Bulmer, S. Mark Scott, Helen M. Cox, Nicol C. Voermans, Qasim Aziz, L. Ashley Blackshaw
J Physiol. 2018 Sep 1; 596(17): 4237–4251. Published online 2018 Jul 18. doi: 10.1113/JP276300
PMCID:
PMC6117562
AbstractArticlePDF–1.4M
14.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
15.
Glycoproteomics Reveals Decorin Peptides with Anti-Myostatin Activity in Human Atrial Fibrillation
Javier Barallobre-Barreiro, Shashi K. Gupta, Anna Zoccarato, Rika Kitazume-Taneike, Marika Fava, Xiaoke Yin, Tessa Werner, Marc N Hirt, Anna Zampetaki, Alessandro Viviano, Mei Chong, Marshall Bern, Antonios Kourliouros, Nieves Domenech, Peter Willeit, Ajay M Shah, Marjan Jahangiri, Liliana Schaefer, Jens W. Fischer, Renato V. Iozzo, Rosa Viner, Thomas Thum, Joerg Heineke, Antoine Kichler, Kinya Otsu, Manuel Mayr
Circulation. Author manuscript; available in PMC 2017 Mar 13.
Published in final edited form as: Circulation. 2016 Sep 13; 134(11): 817–832. Published online 2016 Aug 24. doi: 10.1161/CIRCULATIONAHA.115.016423
PMCID:
PMC5081096
AbstractArticlePDF–2.5M
16.
Ehlers-Danlos Syndrome Caused by Biallelic TNXB Variants in Patients with Congenital Adrenal Hyperplasia
Wuyan Chen, Ashley F. Perritt, Rachel Morissette, Jennifer L. Dreiling, Markus-Frederik Bohn, Ashwini Mallappa, Zhi Xu, Martha Quezado, Deborah P. Merke
Hum Mutat. Author manuscript; available in PMC 2017 Sep 1.
Published in final edited form as: Hum Mutat. 2016 Sep; 37(9): 893–897. Published online 2016 Jul 8. doi: 10.1002/humu.23028
PMCID:
PMC4983206
AbstractArticlePDF–1.9M
17.
Extracellular matrix remodelling in response to venous hypertension: proteomics of human varicose veins
Javier Barallobre-Barreiro, Rahmi Oklu, Marc Lynch, Marika Fava, Ferheen Baig, Xiaoke Yin, Temo Barwari, David N. Potier, Hassan Albadawi, Marjan Jahangiri, Karen E. Porter, Michael T. Watkins, Sanjay Misra, Julianne Stoughton, Manuel Mayr
Cardiovasc Res. 2016 Jun 1; 110(3): 419–430. Published online 2016 Apr 11. doi: 10.1093/cvr/cvw075
PMCID:
PMC4872879
AbstractArticlePDF–1.1M
18.
RARE VARIANTS IN TENASCIN GENES IN A COHORT OF CHILDREN WITH PRIMARY VESICOURETERIC REFLUX
Shan Elahi, Alison Homstad, Himani Vaidya, Jennifer Stout, Gentzon Hall, Guanghong Wu, Peter Conlon, jr, Jonathan C. Routh, John S. Wiener, Sherry S. Ross, Shashi Nagaraj, Delbert Wigfall, John Foreman, Adebowale Adeyemo, Indra R. Gupta, Patrick D. Brophy, C. Egla Rabinovich, Rasheed A. Gbadegesin
Pediatr Nephrol. Author manuscript; available in PMC 2016 May 1.
Published in final edited form as: Pediatr Nephrol. 2016 Feb; 31(2): 247–253. Published online 2015 Sep 25. doi: 10.1007/s00467-015-3203-6
PMCID:
PMC4747108
AbstractArticlePDF–655K
19.
Secretome Identifies Tenascin-X as a Potent Marker of Ovarian Cancer
Marianne Kramer, Sandra Pierredon, Pascale Ribaux, Jean-Christophe Tille, Patrick Petignat, Marie Cohen
Biomed Res Int. 2015; 2015: 208017. Published online 2015 May 18. doi: 10.1155/2015/208017
PMCID:
PMC4450242
AbstractArticlePDF–3.2M
20.
Tenascin-X: beyond the architectural function
Ulrich Valcourt, Lindsay B Alcaraz, Jean-Yves Exposito, Claire Lethias, Laurent Bartholin
Cell Adh Migr. 2015 Jan-Apr; 9(1-2): 154–165. Published online 2015 Mar 20. doi: 10.4161/19336918.2014.994893
PMCID:
PMC4422802
AbstractArticlePDF–1.1M

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