PMC Links for GEO Profiles (Select 16293404) - PMC

Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan

Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233

PMCID:: PMC10237422

Abstract Article PDF–23M

Select item 98787994.

PCDH17 gene promoter methylation status in a cohort of Egyptian women with epithelial ovarian cancer

Sherif Mohamed Elsharkawi, Dalal Elkaffash, Pacint Moez, Nour El-Etreby, Eman Sheta, Raghda Saad Zaghloul Taleb

BMC Cancer. 2023; 23: 89. Published online 2023 Jan 25. doi: 10.1186/s12885-023-10549-3

PMCID:: PMC9878799

Abstract Article PDF–1.5M

Select item 85275785.

An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity

Yuehui Zhang, Limin Shang, Jing Zhang, Yuchen Liu, Chaozhi Jin, Yanan Zhao, Xiaobo Lei, Wenjing Wang, Xia Xiao, Xiuyuan Zhang, Yujiao Liu, Linlin Liu, Meng-Wei Zhuang, Qingkun Mi, Chunyan Tian, Jianwei Wang, Fuchu He, Pei-Hui Wang, Jian Wang

Cell Chem Biol. 2022 Jan 20; 29(1): 5–18.e6. Published online 2021 Oct 20. doi: 10.1016/j.chembiol.2021.10.008

PMCID:: PMC8527578

Abstract Article PDF–4.5M

Select item 81650306.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 71699837.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 64401118.

Reduced protocadherin17 expression in leukemia stem cells: the clinical and biological effect in acute myeloid leukemia

Zi-jun Xu, Ji-chun Ma, Jing-dong Zhou, Xiang-mei Wen, Dong-ming Yao, Wei Zhang, Run-bi Ji, De-hong Wu, Li-juan Tang, Zhao-qun Deng, Jun Qian, Jiang Lin

J Transl Med. 2019; 17: 102. Published online 2019 Mar 29. doi: 10.1186/s12967-019-1851-1

PMCID:: PMC6440111

Abstract Article PDF–2.8M

Select item 61666829.

Histone Interaction Landscapes Visualized by Crosslinking Mass Spectrometry in Intact Cell Nuclei

Domenico Fasci, Hugo van Ingen, Richard A. Scheltema, Albert J. R. Heck

Mol Cell Proteomics. 2018 Oct; 17(10): 2018–2033. Published online 2018 Jul 18. doi: 10.1074/mcp.RA118.000924

PMCID:: PMC6166682

Abstract Article PDF–3.8M

Select item 579487210.

The protocadherin 17 gene affects cognition, personality, amygdala structure and function, synapse development and risk of major mood disorders

H Chang, N Hoshina, C Zhang, Y Ma, H Cao, Y Wang, D-d Wu, S E Bergen, M Landén, C M Hultman, M Preisig, Z Kutalik, E Castelao, M Grigoroiu-Serbanescu, A J Forstner, J Strohmaier, J Hecker, T G Schulze, B Müller-Myhsok, A Reif, P B Mitchell, N G Martin, P R Schofield, S Cichon, M M Nöthen, The Swedish Bipolar Study Group, MooDS Bipolar Consortium, H Walter, S Erk, A Heinz, N Amin, C M van Duijn, A Meyer-Lindenberg, H Tost, X Xiao, T Yamamoto, M Rietschel, M Li

Mol Psychiatry. 2018 Feb; 23(2): 400–412. Published online 2017 Jan 10. doi: 10.1038/mp.2016.231

PMCID:: PMC5794872

Abstract Article PDF–638K

Select item 553161111.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 551356412.

Aberrant Promoter Methylation of PCDH17 (Protocadherin 17) in Serum and its Clinical Significance in Renal Cell Carcinoma

Ying-Li Lin, Yun-Peng Wang, Hong-Zhao Li, Xu Zhan

Med Sci Monit. 2017; 23: 3318–3323. Published online 2017 Jul 8. doi: 10.12659/MSM.902077

PMCID:: PMC5513564

Abstract Article PDF–368K

Select item 523951013.

Protocadherin 17 functions as a tumor suppressor suppressing Wnt/β-catenin signaling and cell metastasis and is frequently methylated in breast cancer

Xuedong Yin, Tingxiu Xiang, Junhao Mu, Haitao Mao, Lili Li, Xin Huang, Chunhong Li, Yixiao Feng, Xinrong Luo, Yuxian Wei, Weiyan Peng, Guosheng Ren, Qian Tao

Oncotarget. 2016 Aug 9; 7(32): 51720–51732. Published online 2016 Jun 16. doi: 10.18632/oncotarget.10102

PMCID:: PMC5239510

Abstract Article PDF–9.8M

Select item 499480714.

A GENE SIGNATURE OF NON-HEALING VENOUS ULCERS: POTENTIAL DIAGNOSTIC MARKERS

Carlos A. Charles, Marjana Tomic-Canic, Vladimir Vincek, Mehdi Nassiri, Olivera Stojadinovic, William H. Eaglstein, Robert S. Kirsner

J Am Acad Dermatol. Author manuscript; available in PMC 2016 Aug 23.

Published in final edited form as: J Am Acad Dermatol. 2008 Nov; 59(5): 758–771. Published online 2008 Aug 20. doi: 10.1016/j.jaad.2008.07.018

PMCID:: PMC4994807

Abstract Article PDF–126K

Select item 482306915.

An epigenetic biomarker combination of PCDH17 and POU4F2 detects bladder cancer accurately by methylation analyses of urine sediment DNA in Han Chinese

Yongqiang Wang, Yuan Yu, Rui Ye, Duo Zhang, Qiaoling Li, Dan An, Lu Fang, Youcheng Lin, Yong Hou, Abai Xu, Yu Fu, Wei Lu, Xin Chen, Mingwei Chen, Meng Zhang, Huiling Jiang, Chuanxia Zhang, Pei Dong, Chong Li, Jun Chen, Guosheng Yang, Chunxiao Liu, Zhiming Cai, Fangjian Zhou, Song Wu

Oncotarget. 2016 Jan 19; 7(3): 2754–2764. Published online 2015 Dec 19. doi: 10.18632/oncotarget.6666

PMCID:: PMC4823069

Abstract Article PDF–2.6M

Select item 468938216.

Aberrant Protocadherin17 (PCDH17) Methylation in Serum is a Potential Predictor for Recurrence of Early-Stage Prostate Cancer Patients After Radical Prostatectomy

Ying-Li Lin, Qiu-Kui Deng, Yu-Hao Wang, Xing-Li Fu, Jian-Guo Ma, Wen-Ping Li

Med Sci Monit. 2015; 21: 3955–3960. Published online 2015 Dec 19. doi: 10.12659/MSM.896763

PMCID:: PMC4689382

Abstract Article PDF–334K

Select item 458867717.

Protocadherin17 Promoter Methylation is a Potential Predictive Biomarker in Clear Cell Renal Cell Carcinoma

Ying-Li Lin, Shi-Liang Gui, Hong Guo, Jian-Guo Ma, Wen-Ping Li

Med Sci Monit. 2015; 21: 2870–2876. Published online 2015 Sep 25. doi: 10.12659/MSM.895603

PMCID:: PMC4588677

Abstract Article PDF–415K

Select item 334973418.

Genome-Wide Association for Abdominal Subcutaneous and Visceral Adipose Reveals a Novel Locus for Visceral Fat in Women

Caroline S. Fox, Yongmei Liu, Charles C. White, Mary Feitosa, Albert V. Smith, Nancy Heard-Costa, Kurt Lohman, GIANT Consortium, MAGIC Consortium, GLGC Consortium, Andrew D. Johnson, Meredith C. Foster, Danielle M. Greenawalt, Paula Griffin, Jinghong Ding, Anne B. Newman, Fran Tylavsky, Iva Miljkovic, Stephen B. Kritchevsky, Lenore Launer, Melissa Garcia, Gudny Eiriksdottir, J. Jeffrey Carr, Vilmunder Gudnason, Tamara B. Harris, L. Adrienne Cupples, Ingrid B. Borecki

PLoS Genet. 2012 May; 8(5): e1002695. Published online 2012 May 10. doi: 10.1371/journal.pgen.1002695

PMCID:: PMC3349734

Abstract Article PDF–377K

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

Select item 281928120.

Identification of human sperm proteins that interact with human zona pellucida3 (ZP3) using yeast two-hybrid system

Rajesh K. Naz, Latha Dhandapani

J Reprod Immunol. Author manuscript; available in PMC 2011 Jan 1.

Published in final edited form as: J Reprod Immunol. 2010 Jan; 84(1): 24. Published online 2009 Nov 27. doi: 10.1016/j.jri.2009.10.006

PMCID:: PMC2819281

Abstract Article PDF–1.7M

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