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Items: 1 to 20 of 34

1.
Human transcription factor protein interaction networks
Helka Göös, Matias Kinnunen, Kari Salokas, Zenglai Tan, Xiaonan Liu, Leena Yadav, Qin Zhang, Gong-Hong Wei, Markku Varjosalo
Nat Commun. 2022; 13: 766. Published online 2022 Feb 9. doi: 10.1038/s41467-022-28341-5
PMCID:
PMC8828895
AbstractArticlePDF–1.7M
2.
Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome
Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi
Cell. Author manuscript; available in PMC 2022 May 27.
Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011
PMCID:
PMC8165030
AbstractArticlePDF–2.2M
3.
DNA hypermethylation contributes to colorectal cancer metastasis by regulating the binding of CEBPB and TFCP2 to the CPEB1 promoter
Keke Shao, Weilin Pu, Jianfeng Zhang, Shicheng Guo, Fei Qian, Ingrid Glurich, Qing Jin, Yanyun Ma, Shaoqing Ju, Zhao Zhang, Weifeng Ding
Clin Epigenetics. 2021; 13: 89. Published online 2021 Apr 23. doi: 10.1186/s13148-021-01071-z
PMCID:
PMC8063327
AbstractArticlePDF–13M
4.
Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism
Michael Aregger, Keith A. Lawson, Maximillian Billmann, Michael Costanzo, Amy H. Y. Tong, Katherine Chan, Mahfuzur Rahman, Kevin R. Brown, Catherine Ross, Matej Usaj, Lucy Nedyalkova, Olga Sizova, Andrea Habsid, Judy Pawling, Zhen-Yuan Lin, Hala Abdouni, Cassandra J. Wong, Alexander Weiss, Patricia Mero, James W. Dennis, Anne-Claude Gingras, Chad L. Myers, Brenda J. Andrews, Charles Boone, Jason Moffat
Nat Metab. Author manuscript; available in PMC 2020 Dec 1.
Published in final edited form as: Nat Metab. 2020 Jun; 2(6): 499–513. Published online 2020 Jun 1. doi: 10.1038/s42255-020-0211-z
PMCID:
PMC7566881
AbstractArticlePDF–4.8M
5.
CPEB1 deletion is not a common explanation for premature ovarian insufficiency in a Chinese cohort
Wenlin Jiao, Shidou Zhao, Ran Liu, Ting Guo, Yingying Qin
J Ovarian Res. 2020; 13: 49. Published online 2020 Apr 30. doi: 10.1186/s13048-020-00630-x
PMCID:
PMC7193392
AbstractArticlePDF–387K
6.
Architecture of the human interactome defines protein communities and disease networks
Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper
Nature. Author manuscript; available in PMC 2017 Nov 17.
Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366
PMCID:
PMC5531611
AbstractArticlePDF–2.7M
7.
Essential role for non-canonical poly(A) polymerase GLD4 in cytoplasmic polyadenylation and carbohydrate metabolism
Jihae Shin, Ki Young Paek, Maria Ivshina, Emily E. Stackpole, Joel D. Richter
Nucleic Acids Res. 2017 Jun 20; 45(11): 6793–6804. Published online 2017 Apr 5. doi: 10.1093/nar/gkx239
PMCID:
PMC5499868
AbstractArticlePDF–1.8M
8.
Common variants at 2q37.3, 8q24.21, 15q21.3, and 16q24.1 influence chronic lymphocytic leukemia risk
Dalemari Crowther-Swanepoel, Peter Broderick, Maria Chiara Di Bernardo, Sara E Dobbins, María Torres, Mahmoud Mansouri, Clara Ruiz-Ponte, Anna Enjuanes, Richard Rosenquist, Angel Carracedo, Jesper Jurlander, Elias Campo, Gunnar Juliusson, Emilio Montserrat, Karin E Smedby, Martin JS Dyer, Estella Matutes, Claire Dearden, Nicola J Sunter, Andrew G Hall, Tryfonia Mainou-Fowler, Graham H Jackson, Geoffrey Summerfield, Robert J Harris, Andrew R Pettitt, David J Allsup, James R Bailey, Guy Pratt, Chris Pepper, Chris Fegan, Anton Parker, David Oscier, James M Allan, Daniel Catovsky, Richard S Houlston
Nat Genet. Author manuscript; available in PMC 2017 Feb 22.
Published in final edited form as: Nat Genet. 2010 Feb; 42(2): 132–136. Published online 2010 Jan 10. doi: 10.1038/ng.510
PMCID:
PMC5321238
AbstractArticlePDF–935K
9.
RNA binding protein CPEB1 remodels host and viral RNA landscapes
Ranjan Batra, Thomas J. Stark, Alex E. Clark, Jean-Philippe Belzile, Emily C. Wheeler, Brian A. Yee, Hui Huang, Chelsea Gelboin-Burkhart, Stephanie C. Huelga, Stefan Aigner, Brett T. Roberts, Tomas J. Bos, Shashank Sathe, John Paul Donohue, Frank Rigo, Manuel Ares, Jr., Deborah H. Spector, Gene W. Yeo
Nat Struct Mol Biol. Author manuscript; available in PMC 2017 Apr 24.
Published in final edited form as: Nat Struct Mol Biol. 2016 Dec; 23(12): 1101–1110. Published online 2016 Oct 24. doi: 10.1038/nsmb.3310
PMCID:
PMC5140759
AbstractArticlePDF–3.2M
10.
Energy landscapes of a mechanical prion and their implications for the molecular mechanism of long-term memory
Mingchen Chen, Weihua Zheng, Peter G. Wolynes
Proc Natl Acad Sci U S A. 2016 May 3; 113(18): 5006–5011. Published online 2016 Apr 18. doi: 10.1073/pnas.1602702113
PMCID:
PMC4983853
AbstractArticlePDF–1.3M
11.
CPEB1 restrains proliferation of Glioblastoma cells through the regulation of p27Kip1 mRNA translation
Silvia Galardi, Massimo Petretich, Guillaume Pinna, Silvia D’Amico, Fabrizio Loreni, Alessandro Michienzi, Irina Groisman, Silvia Anna Ciafrè
Sci Rep. 2016; 6: 25219. Published online 2016 May 4. doi: 10.1038/srep25219
PMCID:
PMC4855225
AbstractArticlePDF–985K
12.
The WEE1 regulators CPEB1 and miR-15b switch from inhibitor to activators at G2/M
Gueorgui Kratassiouk, Linda L. Pritchard, Sylvain Cuvellier, Andrii Vislovukh, Qingwei Meng, Regina Groisman, Cindy Degerny, Evgeny Deforzh, Annick Harel-Bellan, Irina Groisman
Cell Cycle. 2016; 15(5): 667–677. Published online 2016 Mar 30. doi: 10.1080/15384101.2016.1147631
PMCID:
PMC4845936
AbstractArticlePDF–947K
13.
CPEB1 Mediates Epithelial-to-Mesenchyme Transition and Breast Cancer Metastasis
Kentaro Nagaoka, Kazuki Fujii, Haolin Zhang, Kento Usuda, Gen Watanabe, Maria Ivshina, Joel Richter
Oncogene. Author manuscript; available in PMC 2016 Jul 8.
Published in final edited form as: Oncogene. 2016 Jun 2; 35(22): 2893–2901. Published online 2015 Sep 28. doi: 10.1038/onc.2015.350
PMCID:
PMC4809797
AbstractArticlePDF–2.2M
14.
hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes
Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal
Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012
PMCID:
PMC4647941
AbstractArticle
15.
Structural Analysis of the Pin1-CPEB1 interaction and its potential role in CPEB1 degradation
Constanze Schelhorn, Pau Martín-Malpartida, David Suñol, Maria J. Macias
Sci Rep. 2015; 5: 14990. Published online 2015 Oct 12. doi: 10.1038/srep14990
PMCID:
PMC4601027
AbstractArticlePDF–1.5M
16.
Global Analysis of CPEBs Reveals Sequential and Non-Redundant Functions in Mitotic Cell Cycle
Valeria Giangarrà, Ana Igea, Chiara Lara Castellazzi, Felice-Alessio Bava, Raul Mendez
PLoS One. 2015; 10(9): e0138794. Published online 2015 Sep 23. doi: 10.1371/journal.pone.0138794
PMCID:
PMC4580432
AbstractArticlePDF–3.3M
17.
CPEB mediated ZO-1 mRNA Localization is Required for Epithelial Tight Junction Assembly and Cell Polarity
Kentaro Nagaoka, Tsuyoshi Udagawa, Joel D. Richter
Nat Commun. Author manuscript; available in PMC 2015 Feb 19.
Published in final edited form as: Nat Commun. 2012; 3: 675. Published online 2012 Feb 14. doi: 10.1038/ncomms1678
PMCID:
PMC4334452
AbstractArticlePDF–3.2M
18.
CPEB1 modulates differentiation of glioma stem cells via downregulation of HES1 and SIRT1 expression
Jinlong Yin, Gunwoo Park, Jeong Eun Lee, Ju Young Park, Tae-Hoon Kim, Youn-Jae Kim, Seung-Hoon Lee, Heon Yoo, Jong Heon Kim, Jong Bae Park
Oncotarget. 2014 Aug; 5(16): 6756–6769. Published online 2014 Jul 23. doi: 10.18632/oncotarget.2250
PMCID:
PMC4196161
AbstractArticlePDF–1.5M
19.
Genetic and Acute CPEB Depletion Ameliorate Fragile X Pathophysiology
Tsuyoshi Udagawa, Natalie G. Farny, Mira Jakovcevski, Hanoch Kaphzan, Juan Marcos Alarcon, Shobha Anilkumar, Maria Ivshina, Jessica A. Hurt, Kentaro Nagaoka, Vijayalaxmi C. Nalavadi, Lori J. Lorenz, Gary J. Bassell, Schahram Akbarian, Sumantra Chattarji, Eric Klann, Joel D. Richter
Nat Med. Author manuscript; available in PMC 2014 May 1.
Published in final edited form as: Nat Med. 2013 Nov; 19(11): 1473–1477. Published online 2013 Oct 20. doi: 10.1038/nm.3353
PMCID:
PMC3823751
AbstractArticlePDF–1.2M
20.
Specificity factors in cytoplasmic polyadenylation
Amanda Charlesworth, Hedda A Meijer, Cornelia H de Moor
Wiley Interdiscip Rev RNA. 2013 Jul; 4(4): 437–461. Published online 2013 Jun 14. doi: 10.1002/wrna.1171
PMCID:
PMC3736149
AbstractArticlePDF–334K

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