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Items: 13

Select item 56084721.

Molecular and biological characterization of ϕRs551, a filamentous bacteriophage isolated from a race 3 biovar 2 strain of Ralstonia solanacearum

Abdelmonim Ali Ahmad, Michael J. Stulberg, John Patrick Mershon, Dimitre S. Mollov, Qi Huang

PLoS One. 2017; 12(9): e0185034. Published online 2017 Sep 21. doi: 10.1371/journal.pone.0185034

PMCID:: PMC5608472

Abstract Article PDF–11M

Select item 53184512.

MLPA-Based Analysis of Copy Number Variation in Plant Populations

Anna Samelak-Czajka, Malgorzata Marszalek-Zenczak, Malgorzata Marcinkowska-Swojak, Piotr Kozlowski, Marek Figlerowicz, Agnieszka Zmienko

Front Plant Sci. 2017; 8: 222. Published online 2017 Feb 21. doi: 10.3389/fpls.2017.00222

PMCID:: PMC5318451

Abstract Article PDF–2.4M

Select item 48883043.

Evolution of parasitism and mutualism between filamentous phage M13 and Escherichia coli

Jason W. Shapiro, Elizabeth S.C.P. Williams, Paul E. Turner

PeerJ. 2016; 4: e2060. Published online 2016 May 24. doi: 10.7717/peerj.2060

PMCID:: PMC4888304

Abstract Article PDF–1.4M

Select item 44998044.

Vy-PER: eliminating false positive detection of virus integration events in next generation sequencing data

Michael Forster, Silke Szymczak, David Ellinghaus, Georg Hemmrich, Malte Rühlemann, Lars Kraemer, Sören Mucha, Lars Wienbrandt, Martin Stanulla, UFO Sequencing Consortium within the I-BFM Study Group, Andre Franke

Sci Rep. 2015; 5: 11534. Published online 2015 Jul 13. doi: 10.1038/srep11534

PMCID:: PMC4499804

Abstract Article PDF–589K

Select item 43080105.

Evaluation of methods to purify virus-like particles for metagenomic sequencing of intestinal viromes

Manuel Kleiner, Lora V Hooper, Breck A Duerkop

BMC Genomics. 2015; 16(1): 7. Published online 2015 Jan 22. doi: 10.1186/s12864-014-1207-4

PMCID:: PMC4308010

Abstract Article PDF–811K

Select item 40321296.

Differential Codon Adaptation between dsDNA and ssDNA Phages in Escherichia coli

Shivapriya Chithambaram, Ramanandan Prabhakaran, Xuhua Xia

Mol Biol Evol. 2014 Jun; 31(6): 1606–1617. Published online 2014 Feb 27. doi: 10.1093/molbev/msu087

PMCID:: PMC4032129

Abstract Article PDF–287K

Select item 40124887.

The Effect of Mutation and Selection on Codon Adaptation in Escherichia coli Bacteriophage

Shivapriya Chithambaram, Ramanandan Prabhakaran, Xuhua Xia

Genetics. 2014 May; 197(1): 301–315. Published online 2014 Feb 28. doi: 10.1534/genetics.114.162842

PMCID:: PMC4012488

Abstract Article PDF–2.0M

Select item 36033118.

The Adaptation of Temperate Bacteriophages to Their Host Genomes

Louis-Marie Bobay, Eduardo P.C. Rocha, Marie Touchon

Mol Biol Evol. 2013 Apr; 30(4): 737–751. Published online 2012 Dec 12. doi: 10.1093/molbev/mss279

PMCID:: PMC3603311

Abstract Article PDF–736K

Select item 32451729.

EcoliWiki: a wiki-based community resource for Escherichia coli

Brenley K. McIntosh, Daniel P. Renfro, Gwendowlyn S. Knapp, Chanchala R. Lairikyengbam, Nathan M. Liles, Lili Niu, Amanda M. Supak, Anand Venkatraman, Adrienne E. Zweifel, Deborah A. Siegele, James C. Hu

Nucleic Acids Res. 2012 Jan; 40(Database issue): D1270–D1277. Published online 2011 Nov 7. doi: 10.1093/nar/gkr880

PMCID:: PMC3245172

Abstract Article PDF–3.9M

Select item 225460010.

Viral genome sequencing by random priming methods

Appolinaire Djikeng, Rebecca Halpin, Ryan Kuzmickas, Jay DePasse, Jeremy Feldblyum, Naomi Sengamalay, Claudio Afonso, Xinsheng Zhang, Norman G Anderson, Elodie Ghedin, David J Spiro

BMC Genomics. 2008; 9: 5. Published online 2008 Jan 7. doi: 10.1186/1471-2164-9-5

PMCID:: PMC2254600

Abstract Article PDF–385K

Select item 128039611.

Design of a Microsphere-Based High-Throughput Gene Expression Assay to Determine Estrogenic Potential

Jorge M. Naciff, Brian D. Richardson, Kerry G. Oliver, M. Lynn Jump, Suzanne M. Torontali, Kenton D. Juhlin, Gregory J. Carr, Jennifer R. Paine, Jay P. Tiesman, George P. Daston

Environ Health Perspect. 2005 Sep; 113(9): 1164–1171. Published online 2005 May 12. doi: 10.1289/ehp.7843