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Items: 19

Select item 69512771.

Phoenix phylogeny, and analysis of genetic variation in a diverse collection of date palm (Phoenix dactylifera) and related species

Srinivasa R. Chaluvadi, Porter Young, Kentrez Thompson, Bochra Amina Bahri, Bhavesh Gajera, Subhash Narayanan, Robert Krueger, Jeffrey L. Bennetzen

Plant Divers. 2019 Oct; 41(5): 330–339. Published online 2018 Dec 18. doi: 10.1016/j.pld.2018.11.005

PMCID:: PMC6951277

Abstract Article PDF–2.5M

Select item 68084322.

Complete chloroplast genome sequence and phylogenetic analysis of Spathiphyllum 'Parrish'

Xiao-Fei Liu, Gen-Fa Zhu, Dong-Mei Li, Xiao-Jing Wang

PLoS One. 2019; 14(10): e0224038. Published online 2019 Oct 23. doi: 10.1371/journal.pone.0224038

PMCID:: PMC6808432

Abstract Article PDF–2.5M

Select item 67362863.

Unprecedented Parallel Photosynthetic Losses in a Heterotrophic Orchid Genus

Craig F Barrett, Brandon T Sinn, Aaron H Kennedy

Mol Biol Evol. 2019 Sep; 36(9): 1884–1901. Published online 2019 May 6. doi: 10.1093/molbev/msz111

PMCID:: PMC6736286

Abstract Article PDF–713K

Select item 65805824.

Novel subpopulations in date palm (Phoenix dactylifera) identified by population-wide organellar genome sequencing

Yasmin A. Mohamoud, Lisa S. Mathew, Maria F. Torres, Shameem Younuskunju, Robert Krueger, Karsten Suhre, Joel A. Malek

BMC Genomics. 2019; 20: 498. Published online 2019 Jun 17. doi: 10.1186/s12864-019-5834-7

PMCID:: PMC6580582

Abstract Article PDF–630K

Select item 62156125.

Mosaic mitochondrial-plastid insertions into the nuclear genome show evidence of both non-homologous end joining and homologous recombination

Shir Portugez, William F. Martin, Einat Hazkani-Covo

BMC Evol Biol. 2018; 18: 162. Published online 2018 Nov 3. doi: 10.1186/s12862-018-1279-x

PMCID:: PMC6215612

Abstract Article PDF–900K

Select item 62110596.

Genomic Insights into Date Palm Origins

Muriel Gros-Balthazard, Khaled Michel Hazzouri, Jonathan Mark Flowers

Genes (Basel) 2018 Oct; 9(10): 502. Published online 2018 Oct 17. doi: 10.3390/genes9100502

PMCID:: PMC6211059

Abstract Article PDF–1.1M

Select item 57748137.

Differential DNA methylation and transcription profiles in date palm roots exposed to salinity

Ibtisam Al-Harrasi, Rashid Al-Yahyai, Mahmoud W. Yaish

PLoS One. 2018; 13(1): e0191492. Published online 2018 Jan 19. doi: 10.1371/journal.pone.0191492

PMCID:: PMC5774813

Abstract Article PDF–7.1M

Select item 49864538.

History of Plastid DNA Insertions Reveals Weak Deletion and AT Mutation Biases in Angiosperm Mitochondrial Genomes

Daniel B. Sloan, Zhiqiang Wu

Genome Biol Evol. 2014 Dec; 6(12): 3210–3221. Published online 2014 Nov 21. doi: 10.1093/gbe/evu253

PMCID:: PMC4986453

Abstract Article PDF–770K

Select item 49182019.

Chloroplast genomes: diversity, evolution, and applications in genetic engineering

Henry Daniell, Choun-Sea Lin, Ming Yu, Wan-Jung Chang

Genome Biol. 2016; 17: 134. Published online 2016 Jun 23. doi: 10.1186/s13059-016-1004-2

PMCID:: PMC4918201

Abstract Article PDF–2.4M

Select item 466761210.

Whole genome re-sequencing of date palms yields insights into diversification of a fruit tree crop

Khaled M. Hazzouri, Jonathan M. Flowers, Hendrik J. Visser, Hussam S. M. Khierallah, Ulises Rosas, Gina M. Pham, Rachel S. Meyer, Caryn K. Johansen, Zoë A. Fresquez, Khaled Masmoudi, Nadia Haider, Nabila El Kadri, Youssef Idaghdour, Joel A. Malek, Deborah Thirkhill, Ghulam S. Markhand, Robert R. Krueger, Abdelouahhab Zaid, Michael D. Purugganan

Nat Commun. 2015; 6: 8824. Published online 2015 Nov 9. doi: 10.1038/ncomms9824

PMCID:: PMC4667612

Abstract Article PDF–1.1M

Select item 455885211.

The Highly Reduced Plastome of Mycoheterotrophic Sciaphila (Triuridaceae) Is Colinear with Its Green Relatives and Is under Strong Purifying Selection

Vivienne K.Y. Lam, Marybel Soto Gomez, Sean W. Graham

Genome Biol Evol. 2015 Aug; 7(8): 2220–2236. Published online 2015 Jun 13. doi: 10.1093/gbe/evv134

PMCID:: PMC4558852

Abstract Article PDF–849K

Select item 398177112.

Whole Mitochondrial and Plastid Genome SNP Analysis of Nine Date Palm Cultivars Reveals Plastid Heteroplasmy and Close Phylogenetic Relationships among Cultivars

Jamal S. M. Sabir, Dhivya Arasappan, Ahmed Bahieldin, Salah Abo-Aba, Sameera Bafeel, Talal A. Zari, Sherif Edris, Ahmed M. Shokry, Nour O. Gadalla, Ahmed M. Ramadan, Ahmed Atef, Magdy A. Al-Kordy, Fotoh M. El-Domyati, Robert K. Jansen

PLoS One. 2014; 9(4): e94158. Published online 2014 Apr 9. doi: 10.1371/journal.pone.0094158

PMCID:: PMC3981771

Abstract Article PDF–858K

Select item 389067213.

The chloroplast DNA locus psbZ-trnfM as a potential barcode marker in Phoenix L. (Arecaceae)

Marco Ballardini, Antonio Mercuri, Claudio Littardi, Summar Abbas, Marie Couderc, Bertha Ludeña, Jean-Christophe Pintaud

Zookeys. 2013; (365): 71–82. Published online 2013 Dec 30. doi: 10.3897/zookeys.365.5725

PMCID:: PMC3890672

Abstract Article PDF–359K

Select item 375830014.

Complete Sequence and Comparative Analysis of the Chloroplast Genome of Coconut Palm (Cocos nucifera)

Ya-Yi Huang, Antonius J. M. Matzke, Marjori Matzke

PLoS One. 2013; 8(8): e74736. Published online 2013 Aug 30. doi: 10.1371/journal.pone.0074736

PMCID:: PMC3758300

Abstract Article PDF–949K

Select item 372833815.

Complete Genes May Pass from Food to Human Blood

Sándor Spisák, Norbert Solymosi, Péter Ittzés, András Bodor, Dániel Kondor, Gábor Vattay, Barbara K. Barták, Ferenc Sipos, Orsolya Galamb, Zsolt Tulassay, Zoltán Szállási, Simon Rasmussen, Thomas Sicheritz-Ponten, Søren Brunak, Béla Molnár, István Csabai

PLoS One. 2013; 8(7): e69805. Published online 2013 Jul 30. doi: 10.1371/journal.pone.0069805