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Items: 11

1.
Rapid Detection of Genetic Engineering, Structural Variation, and Antimicrobial Resistance Markers in Bacterial Biothreat Pathogens by Nanopore Sequencing
Amy S. Gargis, Blake Cherney, Andrew B. Conley, Heather P. McLaughlin, David Sue
Sci Rep. 2019; 9: 13501. Published online 2019 Sep 18. doi: 10.1038/s41598-019-49700-1
PMCID:
PMC6751186
AbstractArticlePDF–3.1M
2.
Marmots and Yersinia pestis Strains in Two Plague Endemic Areas of Tien Shan Mountains
Gulmira Sariyeva, Gulnara Bazarkanova, Ravshambek Maimulov, Sabirzhan Abdikarimov, Berzhan Kurmanov, Aigul Abdirassilova, Anton Shabunin, Zaurbek Sagiyev, Aigul Dzhaparova, Ziyat Abdel, Raikhan Mussagaliyeva, Serge Morand, Vladimir Motin, Michael Kosoy
Front Vet Sci. 2019; 6: 207. Published online 2019 Jul 4. doi: 10.3389/fvets.2019.00207
PMCID:
PMC6620824
AbstractArticlePDF–1.4M
3.
Targeted next-generation sequencing for the detection of ciprofloxacin resistance markers using molecular inversion probes
Christopher P. Stefan, Jeffrey W. Koehler, Timothy D. Minogue
Sci Rep. 2016; 6: 25904. Published online 2016 May 13. doi: 10.1038/srep25904
PMCID:
PMC4865750
AbstractArticlePDF–1.8M
4.
Yersinia spp. Identification Using Copy Diversity in the Chromosomal 16S rRNA Gene Sequence
Huijing Hao, Junrong Liang, Ran Duan, Yuhuang Chen, Chang Liu, Yuchun Xiao, Xu Li, Mingming Su, Huaiqi Jing, Xin Wang
PLoS One. 2016; 11(1): e0147639. Published online 2016 Jan 25. doi: 10.1371/journal.pone.0147639
PMCID:
PMC4726496
AbstractArticlePDF–1.1M
5.
Genome Wide Search for Biomarkers to Diagnose Yersinia Infections
Vipin Chandra Kalia, Prasun Kumar
Indian J Microbiol. 2015 Dec; 55(4): 366–374. Published online 2015 Sep 9. doi: 10.1007/s12088-015-0552-6
PMCID:
PMC4627949
AbstractArticlePDF–410K
6.
Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica
Shannon L. Johnson, Hajnalka E. Daligault, Karen W. Davenport, James Jaissle, Kenneth G. Frey, Jason T. Ladner, Stacey M. Broomall, Kimberly A. Bishop-Lilly, David C. Bruce, Susan R. Coyne, Henry S. Gibbons, Chien-Chi Lo, A. Christine Munk, C. Nicole Rosenzweig, Galina I. Koroleva, Gustavo F. Palacios, Cassie L. Redden, Yan Xu, Timothy D. Minogue, Patrick S. Chain
Genome Announc. 2015 Mar-Apr; 3(2): e00148-15. Published online 2015 Apr 30. doi: 10.1128/genomeA.00148-15
PMCID:
PMC4417686
AbstractArticlePDF–188K
7.
RIEMS: a software pipeline for sensitive and comprehensive taxonomic classification of reads from metagenomics datasets
Matthias Scheuch, Dirk Höper, Martin Beer
BMC Bioinformatics. 2015; 16(1): 69. Published online 2015 Mar 3. doi: 10.1186/s12859-015-0503-6
PMCID:
PMC4351923
AbstractArticlePDF–1.8M
8.
Concordance and discordance of sequence survey methods for molecular epidemiology
Eduardo Castro-Nallar, Nur A. Hasan, Thomas A. Cebula, Rita R. Colwell, Richard A. Robison, W. Evan Johnson, Keith A. Crandall
PeerJ. 2015; 3: e761. Published online 2015 Feb 17. doi: 10.7717/peerj.761
PMCID:
PMC4338773
AbstractArticlePDF–3.1M
9.
Dynamics of CRISPR Loci in Microevolutionary Process of Yersinia pestis Strains
Maria Paloma S. Barros, Camila T. França, Rosanny Holanda F. B. Lins, Milena Danda V. Santos, Ednaldo J. Silva, Maria Betânia M. Oliveira, Vladimir M. Silveira-Filho, Antônio M. Rezende, Valdir Q. Balbino, Tereza Cristina Leal-Balbino
PLoS One. 2014; 9(9): e108353. Published online 2014 Sep 29. doi: 10.1371/journal.pone.0108353
PMCID:
PMC4180756
AbstractArticlePDF–847K
10.
Kinetic Characterization and Allosteric Inhibition of the Yersinia pestis 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase (MEP Synthase)
Amanda Haymond, Chinchu Johny, Tyrone Dowdy, Brandon Schweibenz, Karen Villarroel, Richard Young, Clark J. Mantooth, Trishal Patel, Jessica Bases, Geraldine San Jose, Emily R. Jackson, Cynthia S. Dowd, Robin D. Couch
PLoS One. 2014; 9(8): e106243. Published online 2014 Aug 29. doi: 10.1371/journal.pone.0106243
PMCID:
PMC4149570
AbstractArticlePDF–1.8M
11.
Probabilistic models for CRISPR spacer content evolution
Anne Kupczok, Jonathan P Bollback
BMC Evol Biol. 2013; 13: 54. Published online 2013 Feb 26. doi: 10.1186/1471-2148-13-54
PMCID:
PMC3704272
AbstractArticlePDF–1.0M

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