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Select item 69725691.

The global distribution and evolutionary history of the pT26‐2 archaeal plasmid family

Catherine Badel, Gaël Erauso, Annika L. Gomez, Ryan Catchpole, Mathieu Gonnet, Jacques Oberto, Patrick Forterre, Violette Da Cunha

Environ Microbiol. 2019 Dec; 21(12): 4685–4705. Published online 2019 Oct 21. doi: 10.1111/1462-2920.14800

PMCID:: PMC6972569

Abstract Article PDF–7.2M

Select item 66042062.

Cascade synthesis of uridine-5′-diphosphate glucuronic acid by coupling multiple whole cells expressing hyperthermophilic enzymes

Dan-Hua Meng, Ran-Ran Du, Lu-Zhou Chen, Meng-Ting Li, Fei Liu, Jin Hou, Yi-Kang Shi, Feng-Shan Wang, Ju-Zheng Sheng

Microb Cell Fact. 2019; 18: 118. Published online 2019 Jul 1. doi: 10.1186/s12934-019-1168-z

PMCID:: PMC6604206

Abstract Article PDF–1.4M

Select item 57924363.

TT(N)mGCCTC inhibits archaeal family B DNA polymerases

Shuhui Sun, Wei Guo, Jin-Shu Yang, Mengsheng Qiu, Xiao-Jing Zhu, Zhong-Min Dai

Sci Rep. 2018; 8: 1990. Published online 2018 Jan 31. doi: 10.1038/s41598-018-20127-4

PMCID:: PMC5792436

Abstract Article PDF–1.6M

Select item 56636884.

Genome Replication in Thermococcus kodakarensis Independent of Cdc6 and an Origin of Replication

Alexandra M. Gehring, David P. Astling, Rie Matsumi, Brett W. Burkhart, Zvi Kelman, John N. Reeve, Kenneth L. Jones, Thomas J. Santangelo

Front Microbiol. 2017; 8: 2084. Published online 2017 Oct 27. doi: 10.3389/fmicb.2017.02084

PMCID:: PMC5663688

Abstract Article PDF–2.1M

Select item 51015815.

Crystal structure of a phosphoribosyl anthranilate isomerase from the hyperthermophilic archaeon Thermococcus kodakaraensis

Sumera Perveen, Naeem Rashid, Anastassios C. Papageorgiou

Acta Crystallogr F Struct Biol Commun. 2016 Nov 1; 72(Pt 11): 804–812. Published online 2016 Oct 24. doi: 10.1107/S2053230X16015223

PMCID:: PMC5101581

Abstract Article PDF–1.4M

Select item 50542226.

A Method for Identification of Selenoprotein Genes in Archaeal Genomes

Mingfeng Li, Yanzhao Huang, Yi Xiao

Genomics Proteomics Bioinformatics. 2009 Jun; 7(1-2): 62–70. Published online 2009 Jul 8. doi: 10.1016/S1672-0229(08)60034-0

PMCID:: PMC5054222

Abstract Article PDF–759K

Select item 48703377.

The Proteome and Lipidome of Thermococcus kodakarensis across the Stationary Phase

Emma J. Gagen, Marcos Y. Yoshinaga, Franka Garcia Prado, Kai-Uwe Hinrichs, Michael Thomm

Archaea. 2016; 2016: 5938289. Published online 2016 May 4. doi: 10.1155/2016/5938289

PMCID:: PMC4870337

Abstract Article PDF–856K

Select item 45751128.

Serine 363 of a Hydrophobic Region of Archaeal Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase from Archaeoglobus fulgidus and Thermococcus kodakaraensis Affects CO₂/O₂ Substrate Specificity and Oxygen Sensitivity

Nathan E. Kreel, F. Robert Tabita

PLoS One. 2015; 10(9): e0138351. Published online 2015 Sep 18. doi: 10.1371/journal.pone.0138351

PMCID:: PMC4575112

Abstract Article PDF–4.5M

Select item 43908879.

Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis

Guanghong Zuo, Zhao Xu, Bailin Hao

Life (Basel) 2015 Mar; 5(1): 949–968. Published online 2015 Mar 17. doi: 10.3390/life5010949

PMCID:: PMC4390887

Abstract Article PDF–1019K

Select item 391121210.

Novel Maltotriose-Hydrolyzing Thermoacidophilic Type III Pullulan Hydrolase from Thermococcus kodakarensis

Nasir Ahmad, Naeem Rashid, Muhammad Saleem Haider, Mehwish Akram, Muhammad Akhtar

Appl Environ Microbiol. 2014 Feb; 80(3): 1108–1115. doi: 10.1128/AEM.03139-13

PMCID:: PMC3911212

Abstract Article PDF–926K

Select item 384916511.

Computational identification of functional RNA homologs in metagenomic data

Eric P. Nawrocki, Sean R. Eddy

RNA Biol. 2013 Jul 1; 10(7): 1170–1179. Published online 2013 May 20. doi: 10.4161/rna.25038

PMCID:: PMC3849165

Abstract Article PDF–651K

Select item 362326112.

Thermostable Alcohol Dehydrogenase from Thermococcus kodakarensis KOD1 for Enantioselective Bioconversion of Aromatic Secondary Alcohols

Xi Wu, Chong Zhang, Izumi Orita, Tadayuki Imanaka, Toshiaki Fukui, Xin-Hui Xing

Appl Environ Microbiol. 2013 Apr; 79(7): 2209–2217. doi: 10.1128/AEM.03873-12

PMCID:: PMC3623261

Abstract Article PDF–485K

Select item 356125113.

Linking genome content to biofuel production yields: a meta-analysis of major catabolic pathways among select H₂ and ethanol-producing bacteria

Carlo R Carere, Thomas Rydzak, Tobin J Verbeke, Nazim Cicek, David B Levin, Richard Sparling

BMC Microbiol. 2012; 12: 295. Published online 2012 Dec 18. doi: 10.1186/1471-2180-12-295

PMCID:: PMC3561251

Abstract Article PDF–546K

Select item 355469114.

Systematic Functional Comparative Analysis of Four Single-Stranded DNA-Binding Proteins and Their Affection on Viral RNA Metabolism

Haiyan Shi, Yonghui Zhang, Guohui Zhang, Jinlei Guo, Xun Zhang, Haiyan Song, Jianxin Lv, Jimin Gao, Yuepeng Wang, Litian Chen, Yue Wang

PLoS One. 2013; 8(1): e55076. Published online 2013 Jan 24. doi: 10.1371/journal.pone.0055076

Correction in:: PLoS One. 2013; 8(8): 10.1371/annotation/b45ca472-8c85-407c-90e4-59f0aff300ea.

PMCID:: PMC3554691

Abstract Article PDF–931K

Select item 304100115.

Mapping of origin of replication in Themococcales

Krishna K Ojha, D Swati

Bioinformation. 2010; 5(5): 213–218. Published online 2010 Nov 1. doi: 10.6026/97320630005213

PMCID:: PMC3041001

Abstract Article PDF–347K

Select item 273596716.

Estimating the Fraction of Non-Coding RNAs in Mammalian Transcriptomes

Yurong Xin, Giulio Quarta, Hin Hark Gan, Tamar Schlick

Bioinform Biol Insights. 2008; 2: 75–94. Published online 2008 Mar 1. doi: 10.4137/bbi.s443

PMCID:: PMC2735967

Abstract Article PDF–670K

Select item 268558517.

A putative viral defence mechanism in archaeal cells

Reidun Lillestøl, Peter Redder, Roger A. Garrett, Kim Brügger

Archaea. 2006 Aug; 2(1): 59–72. Published online 2006 Jul 10. doi: 10.1155/2006/542818

PMCID:: PMC2685585

Abstract Article PDF–1.2M

Select item 228981618.

Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes

Jon Bohlin, Eystein Skjerve, David W Ussery

BMC Genomics. 2008; 9: 104. Published online 2008 Feb 28. doi: 10.1186/1471-2164-9-104

PMCID:: PMC2289816

Abstract Article PDF–753K

Select item 223790019.

Sequence Evidence in the Archaeal Genomes that tRNAs Emerged Through the Combination of Ancestral Genes as 5′ and 3′ tRNA Halves

Kosuke Fujishima, Junichi Sugahara, Masaru Tomita, Akio Kanai

PLoS One. 2008; 3(2): e1622. Published online 2008 Feb 20. doi: 10.1371/journal.pone.0001622

PMCID:: PMC2237900

Abstract Article PDF–541K

Select item 222261620.

Clusters of orthologous genes for 41 archaeal genomes and implications for evolutionary genomics of archaea

Kira S Makarova, Alexander V Sorokin, Pavel S Novichkov, Yuri I Wolf, Eugene V Koonin

Biol Direct. 2007; 2: 33. Published online 2007 Nov 27. doi: 10.1186/1745-6150-2-33

PMCID:: PMC2222616

Abstract Article PDF–593K

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Full text in PMC (nucleotide) for Gene (Select 3235479) (27)
PMC
MULTISPECIES: hypothetical protein [Mycobacterium]
MULTISPECIES: hypothetical protein [Mycobacterium]
gi|504754024|ref|WP_014941126.1|

Protein
hester ononidifolia (94)
GEO DataSets
Rattus norvegicus synaptotagmin 10 (Syt10), mRNA
Rattus norvegicus synaptotagmin 10 (Syt10), mRNA
gi|2708437898|ref|NM_031666.3|

Nucleotide
sorting nexin-16 isoform a [Homo sapiens]
sorting nexin-16 isoform a [Homo sapiens]
gi|23238244|ref|NP_071416.2|

Protein

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