Full text in PMC (nucleotide) for Gene (Select 320038) - PMC

Select item 66148511.

A long noncoding RNA cluster-based genomic locus maintains proper development and visual function

Fei Wang, Dalong Ren, Xiaolin Liang, Shengwei Ke, Bowen Zhang, Bing Hu, Xiaoyuan Song, Xiangting Wang

Nucleic Acids Res. 2019 Jul 9; 47(12): 6315–6329. Published online 2019 May 25. doi: 10.1093/nar/gkz444

PMCID:: PMC6614851

Select item 64280502.

The Evf2 ultraconserved enhancer lncRNA functionally and spatially organizes multi-megabase distant genes in developing forebrain

Ivelisse Cajigas, Abhijit Chakraborty, Kelsey R. Swyter, Hao Luo, Monique Bastidas, Maximilliano Nigro, Elizabeth R. Morris, Sean Chen, Michael J. W. VanGompel, David Leib, Sara J. Kohtz, Marco Martina, Sooky Koh, Ferhat Ay, Jhumku D. Kohtz

Mol Cell. Author manuscript; available in PMC 2019 Sep 20.

Published in final edited form as: Mol Cell. 2018 Sep 20; 71(6): 956–972.e9. Published online 2018 Aug 23. doi: 10.1016/j.molcel.2018.07.024

PMCID:: PMC6428050

Abstract Article PDF–2.0M

Select item 62870893.

Tissue-Specific Actions of Pax6 on Proliferation and Differentiation Balance in Developing Forebrain Are Foxg1 Dependent

Idoia Quintana-Urzainqui, Zrinko Kozić, Soham Mitra, Tian Tian, Martine Manuel, John O. Mason, David J. Price

iScience. 2018 Dec 21; 10: 171–191. Published online 2018 Nov 22. doi: 10.1016/j.isci.2018.11.031

PMCID:: PMC6287089

Abstract Article PDF–12M

Select item 45290374.

Evf2 lncRNA/BRG1/DLX1 interactions reveal RNA-dependent inhibition of chromatin remodeling

Ivelisse Cajigas, David E. Leib, Jesse Cochrane, Hao Luo, Kelsey R. Swyter, Sean Chen, Brian S. Clark, James Thompson, John R. Yates, III, Robert E. Kingston, Jhumku D. Kohtz

Development. 2015 Aug 1; 142(15): 2641–2652. doi: 10.1242/dev.126318

PMCID:: PMC4529037

Abstract Article

Select item 40077165.

Evf2 (Dlx6as) lncRNA regulates ultraconserved enhancer methylation and the differential transcriptional control of adjacent genes

Emily G. Berghoff, Mary F. Clark, Sean Chen, Ivelisse Cajigas, David E. Leib, Jhumku D. Kohtz

Development. 2013 Nov 1; 140(21): 4407–4416. doi: 10.1242/dev.099390

PMCID:: PMC4007716

Abstract Article

Select item 32131336.

An RNA-Seq Strategy to Detect the Complete Coding and Non-Coding Transcriptome Including Full-Length Imprinted Macro ncRNAs

Ru Huang, Markus Jaritz, Philipp Guenzl, Irena Vlatkovic, Andreas Sommer, Ido M. Tamir, Hendrik Marks, Thorsten Klampfl, Robert Kralovics, Hendrik G. Stunnenberg, Denise P. Barlow, Florian M. Pauler

PLoS One. 2011; 6(11): e27288. Published online 2011 Nov 10. doi: 10.1371/journal.pone.0027288

PMCID:: PMC3213133

Abstract Article PDF–1.3M

Select item 26799447.

Expression and Function of Dlx Genes in the Osteoblast Lineage

Haitao Li, Inga Marijanovic, Mark S. Kronenberg, Ivana Erceg, Mary Louise Stover, Dimitrios Velonis, Mina Mina, Jelica Gluhak Heinrich, Stephen E Harris, William B. Upholt, Ivo Kalajzic, Alexander C. Lichtler

Dev Biol. Author manuscript; available in PMC 2009 May 9.

Published in final edited form as: Dev Biol. 2008 Apr 15; 316(2): 458–470. Published online 2008 Jan 16. doi: 10.1016/j.ydbio.2008.01.001

PMCID:: PMC2679944

Abstract Article PDF–2.8M

Select item 24934288.

Comparative analysis of human chromosome 7q21 and mouse proximal chromosome 6 reveals a placental-specific imprinted gene, TFPI2/Tfpi2, which requires EHMT2 and EED for allelic-silencing

David Monk, Alexandre Wagschal, Philippe Arnaud, Pari-Sima Müller, Layla Parker-Katiraee, Déborah Bourc’his, Stephen W. Scherer, Robert Feil, Philip Stanier, Gudrun E. Moore

Genome Res. 2008 Aug; 18(8): 1270–1281. doi: 10.1101/gr.077115.108

PMCID:: PMC2493428

Abstract Article PDF–1.2M

Select item 22066029.

Specific expression of long noncoding RNAs in the mouse brain

Tim R. Mercer, Marcel E. Dinger, Susan M. Sunkin, Mark F. Mehler, John S. Mattick

Proc Natl Acad Sci U S A. 2008 Jan 15; 105(2): 716–721. Published online 2008 Jan 9. doi: 10.1073/pnas.0706729105

PMCID:: PMC2206602

Abstract Article PDF–806K

Select item 147576010.

The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator

Jianchi Feng, Chunming Bi, Brian S. Clark, Rina Mady, Palak Shah, Jhumku D. Kohtz

Genes Dev. 2006 Jun 1; 20(11): 1470–1484. doi: 10.1101/gad.1416106

PMCID:: PMC1475760

Abstract Article PDF–1.0M

Select item 31099211.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098012.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

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