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Items: 16

Select item 64871451.

Linking De Novo Assembly Results with Long DNA Reads Using the dnaasm-link Application

Wiktor Kuśmirek, Wiktor Franus, Robert Nowak

Biomed Res Int. 2019; 2019: 7847064. Published online 2019 Apr 11. doi: 10.1155/2019/7847064

PMCID:: PMC6487145

Abstract Article PDF–896K

Select item 64169242.

GRIBCG: a software for selection of sgRNAs in the design of balancer chromosomes

Brian B. Merritt, Lily S. Cheung

BMC Bioinformatics. 2019; 20: 122. Published online 2019 Mar 12. doi: 10.1186/s12859-019-2712-x

PMCID:: PMC6416924

Abstract Article PDF–1.4M

Select item 63702703.

The Nematode Caenorhabditis elegans as a Model Organism to Study Metabolic Effects of ω-3 Polyunsaturated Fatty Acids in Obesity

Amal Bouyanfif, Shasika Jayarathne, Iurii Koboziev, Naima Moustaid-Moussa

Adv Nutr. 2019 Jan; 10(1): 165–178. Published online 2019 Jan 24. doi: 10.1093/advances/nmy059

PMCID:: PMC6370270

Abstract Article PDF–4.2M

Select item 59348514.

EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes

Frederick Johannes Clasen, Rian Ewald Pierneef, Bernard Slippers, Oleg Reva

BMC Genomics. 2018; 19: 323. Published online 2018 May 3. doi: 10.1186/s12864-018-4724-8

PMCID:: PMC5934851

Abstract Article PDF–1.1M

Select item 52746825.

Database of Periodic DNA Regions in Major Genomes

Felix E. Frenkel, Maria A. Korotkova, Eugene V. Korotkov

Biomed Res Int. 2017; 2017: 7949287. Published online 2017 Jan 15. doi: 10.1155/2017/7949287

PMCID:: PMC5274682

Abstract Article PDF–734K

Select item 46749006.

How genome complexity can explain the difficulty of aligning reads to genomes

Vinhthuy Phan, Shanshan Gao, Quang Tran, Nam S Vo

BMC Bioinformatics. 2015; 16(Suppl 17): S3. Published online 2015 Dec 7. doi: 10.1186/1471-2105-16-S17-S3

PMCID:: PMC4674900

Abstract Article PDF–2.1M

Select item 46496387.

A New Player in the Spermiogenesis Pathway of Caenorhabditis elegans

Craig W. LaMunyon, Ubaydah Nasri, Nicholas G. Sullivan, Misa A. Shaw, Gaurav Prajapati, Matthew Christensen, Daniel Elmatari, Jessica N. Clark

Genetics. 2015 Nov; 201(3): 1103–1116. Published online 2015 Sep 2. doi: 10.1534/genetics.115.181172

PMCID:: PMC4649638

Abstract Article PDF–2.5M

Select item 42229028.

Comparative Genomic Analysis of slc39a12/ZIP12: Insight into a Zinc Transporter Required for Vertebrate Nervous System Development

Winyoo Chowanadisai

PLoS One. 2014; 9(11): e111535. Published online 2014 Nov 6. doi: 10.1371/journal.pone.0111535

PMCID:: PMC4222902

Abstract Article PDF–1.8M

Select item 41201449.

RandAL: a randomized approach to aligning DNA sequences to reference genomes

Nam S Vo, Quang Tran, Nobal Niraula, Vinhthuy Phan

BMC Genomics. 2014; 15(Suppl 5): S2. Published online 2014 Jul 14. doi: 10.1186/1471-2164-15-S5-S2

PMCID:: PMC4120144

Abstract Article PDF–1.2M

Select item 403469210.

Proteogenomic database construction driven from large scale RNA-seq data

Sunghee Woo, Seong Won Cha, Gennifer Merrihew, Yupeng He, Natalie Castellana, Clark Guest, Michael MacCoss, Vineet Bafna

J Proteome Res. Author manuscript; available in PMC 2015 Jan 3.

Published in final edited form as: J Proteome Res. 2014 Jan 3; 13(1): 21–28. Published online 2013 Jul 17. doi: 10.1021/pr400294c

PMCID:: PMC4034692

Abstract Article PDF–1.9M

Select item 381629811.

A base composition analysis of natural patterns for the preprocessing of metagenome sequences

Oliver Bonham-Carter, Hesham Ali, Dhundy Bastola

BMC Bioinformatics. 2013; 14(Suppl 11): S5. Published online 2013 Nov 4. doi: 10.1186/1471-2105-14-S11-S5

PMCID:: PMC3816298

Abstract Article PDF–2.2M

Select item 376927112.

A Small Conductance Calcium-Activated K⁺ Channel in C. elegans, KCNL-2, Plays a Role in the Regulation of the Rate of Egg-Laying

Cavita K. Chotoo, Gary A. Silverman, Daniel C. Devor, Cliff J. Luke

PLoS One. 2013; 8(9): e75869. Published online 2013 Sep 10. doi: 10.1371/journal.pone.0075869

PMCID:: PMC3769271

Abstract Article PDF–1.3M

Select item 359019713.

Premature Sperm Activation and Defective Spermatogenesis Caused by Loss of spe-46 Function in Caenorhabditis elegans

Wei-Siang Liau, Ubaydah Nasri, Daniel Elmatari, Jason Rothman, Craig W. LaMunyon

PLoS One. 2013; 8(3): e57266. Published online 2013 Mar 6. doi: 10.1371/journal.pone.0057266

PMCID:: PMC3590197

Abstract Article PDF–3.8M

Select item 305672014.

A Practical Comparison of De Novo Genome Assembly Software Tools for Next-Generation Sequencing Technologies

Wenyu Zhang, Jiajia Chen, Yang Yang, Yifei Tang, Jing Shang, Bairong Shen

PLoS One. 2011; 6(3): e17915. Published online 2011 Mar 14. doi: 10.1371/journal.pone.0017915

PMCID:: PMC3056720

Abstract Article PDF–2.2M

Select item 290833515.

A Mutation of cdc-25.1 Causes Defects in Germ Cells But Not in Somatic Tissues in C. elegans

Jiyoung Kim, Ah-Reum Lee, Ichiro Kawasaki, Susan Strome, Yhong-Hee Shim

Mol Cells. Author manuscript; available in PMC 2010 Jul 22.

Published in final edited form as: Mol Cells. 2009 Jul 31; 28(1): 43–48. Published online 2009 Jun 12. doi: 10.1007/s10059-009-0098-8

PMCID:: PMC2908335

Abstract Article PDF–354K

Select item 176203016.

Identification of a gonadotropin-releasing hormone receptor orthologue in Caenorhabditis elegans

Sivan Vadakkadath Meethal, Miguel J Gallego, Ryan J Haasl, Stephen J Petras, III, Jean-Yves Sgro, Craig S Atwood

BMC Evol Biol. 2006; 6: 103. Published online 2006 Nov 29. doi: 10.1186/1471-2148-6-103

PMCID:: PMC1762030

Abstract Article PDF–3.3M

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