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Select item 70123971.

Combining genomics and epidemiology to track mumps virus transmission in the United States

Shirlee Wohl, Hayden C. Metsky, Stephen F. Schaffner, Anne Piantadosi, Meagan Burns, Joseph A. Lewnard, Bridget Chak, Lydia A. Krasilnikova, Katherine J. Siddle, Christian B. Matranga, Bettina Bankamp, Scott Hennigan, Brandon Sabina, Elizabeth H. Byrne, Rebecca J. McNall, Rickey R. Shah, James Qu, Daniel J. Park, Soheyla Gharib, Susan Fitzgerald, Paul Barreira, Stephen Fleming, Susan Lett, Paul A. Rota, Lawrence C. Madoff, Nathan L. Yozwiak, Bronwyn L. MacInnis, Sandra Smole, Yonatan H. Grad, Pardis C. Sabeti

PLoS Biol. 2020 Feb; 18(2): e3000611. Published online 2020 Feb 11. doi: 10.1371/journal.pbio.3000611

PMCID:: PMC7012397

Abstract Article PDF–1.5M

Select item 66363872.

RNA Synthesis and Capping by Non-segmented Negative Strand RNA Viral Polymerases: Lessons From a Prototypic Virus

Tomoaki Ogino, Todd J. Green

Front Microbiol. 2019; 10: 1490. Published online 2019 Jul 10. doi: 10.3389/fmicb.2019.01490

PMCID:: PMC6636387

Abstract Article PDF–8.6M

Select item 65484253.

Three genetically distinct ferlaviruses have varying effects on infected corn snakes (Pantherophis guttatus)

Michael Pees, Volker Schmidt, Tibor Papp, Ákos Gellért, Maha Abbas, J. Matthias Starck, Annkatrin Neul, Rachel E. Marschang

PLoS One. 2019; 14(6): e0217164. Published online 2019 Jun 4. doi: 10.1371/journal.pone.0217164

PMCID:: PMC6548425

Abstract Article PDF–4.7M

Select item 65249424.

Identification and quantification of defective virus genomes in high throughput sequencing data using DVG-profiler, a novel post-sequence alignment processing algorithm

Trent J. Bosma, Konstantinos Karagiannis, Luis Santana-Quintero, Natalia Ilyushina, Tatiana Zagorodnyaya, Svetlana Petrovskaya, Majid Laassri, Raymond P. Donnelly, Steven Rubin, Vahan Simonyan, Christian J. Sauder

PLoS One. 2019; 14(5): e0216944. Published online 2019 May 17. doi: 10.1371/journal.pone.0216944

PMCID:: PMC6524942

Abstract Article PDF–3.0M

Select item 61885605.

A Simple Method to Detect Candidate Overlapping Genes in Viruses Using Single Genome Sequences

Timothy E Schlub, Jan P Buchmann, Edward C Holmes

Mol Biol Evol. 2018 Oct; 35(10): 2572–2581. Published online 2018 Aug 7. doi: 10.1093/molbev/msy155

PMCID:: PMC6188560

Abstract Article PDF–463K

Select item 60949796.

Syndrome Evaluation System for Simultaneous Detection Pathogens Causing Acute Encephalitic Syndrome in India, Part-1: Development and Standardization of the Assay

Sunil Govekar, Siddharth Anand, Latha P. Lakshman, Ravi Vasanthapuram, Ravikumar V. Banda

Front Med (Lausanne) 2018; 5: 208. Published online 2018 Jul 26. doi: 10.3389/fmed.2018.00208

PMCID:: PMC6094979

Abstract Article PDF–1.5M

Select item 50225297.

A Recently Discovered Pathogenic Paramyxovirus, Sosuga Virus, is Present in Rousettus aegyptiacus Fruit Bats at Multiple Locations in Uganda

Brian R. Amman, Cesar G. Albariño, Brian H. Bird, Luke Nyakarahuka, Tara K. Sealy, Stephen Balinandi, Amy J. Schuh, Shelly M. Campbell, Ute Ströher, Megan E. B. Jones, Megan E. Vodzack, DeeAnn M. Reeder, Winyi Kaboyo, Stuart T. Nichol, Jonathan S.Towner

J Wildl Dis. Author manuscript; available in PMC 2016 Sep 14.

Published in final edited form as: J Wildl Dis. 2015 Jul; 51(3): 774–779. Published online 2015 Apr 28. doi: 10.7589/2015-02-044

PMCID:: PMC5022529

Abstract Article PDF–432K

Select item 48745428.

Nipah Virus C Protein Recruits Tsg101 to Promote the Efficient Release of Virus in an ESCRT-Dependent Pathway

Arnold Park, Tatyana Yun, Frederic Vigant, Olivier Pernet, Sohui T. Won, Brian E. Dawes, Wojciech Bartkowski, Alexander N. Freiberg, Benhur Lee

PLoS Pathog. 2016 May; 12(5): e1005659. Published online 2016 May 20. doi: 10.1371/journal.ppat.1005659

PMCID:: PMC4874542

Abstract Article PDF–5.8M

Select item 47674349.

Emerging Paramyxoviruses: Receptor Tropism and Zoonotic Potential

Antra Zeltina, Thomas A. Bowden, Benhur Lee

PLoS Pathog. 2016 Feb; 12(2): e1005390. Published online 2016 Feb 25. doi: 10.1371/journal.ppat.1005390

PMCID:: PMC4767434

Article PDF–2.7M

Select item 447670110.

Host Subtraction, Filtering and Assembly Validations for Novel Viral Discovery Using Next Generation Sequencing Data

Gordon M. Daly, Richard M. Leggett, William Rowe, Samuel Stubbs, Maxim Wilkinson, Ricardo H. Ramirez-Gonzalez, Mario Caccamo, William Bernal, Jonathan L. Heeney

PLoS One. 2015; 10(6): e0129059. Published online 2015 Jun 22. doi: 10.1371/journal.pone.0129059

PMCID:: PMC4476701

Abstract Article PDF–4.7M

Select item 425781111.

Novel Divergent Rhabdovirus in Feces of Red Fox, Spain

Rogier Bodewes, Aritz Ruiz-Gonzalez, Anita C. Schürch, Albert D.M.E. Osterhaus, Saskia L. Smits

Emerg Infect Dis. 2014 Dec; 20(12): 2172–2174. doi: 10.3201/eid2012.140236

PMCID:: PMC4257811

Article PDF–395K

Select item 422779412.

Mapping overlapping functional elements embedded within the protein-coding regions of RNA viruses

Andrew E. Firth

Nucleic Acids Res. 2014 Nov 10; 42(20): 12425–12439. Published online 2014 Oct 17. doi: 10.1093/nar/gku981

PMCID:: PMC4227794

Abstract Article PDF–2.1M

Select item 418774713.

Fatal Systemic Necrotizing Infections Associated with a Novel Paramyxovirus, Anaconda Paramyxovirus, in Green Anaconda Juveniles

Patrick C. Y. Woo, Susanna K. P. Lau, Paolo Martelli, Suk-Wai Hui, Candy C. Y. Lau, Rachel Y. Y. Fan, Joseph M. Groff, Emily W. T. Tam, Kwok-Hung Chan, Kwok-Yung Yuen

J Clin Microbiol. 2014 Oct; 52(10): 3614–3623. doi: 10.1128/JCM.01653-14

PMCID:: PMC4187747

Abstract Article PDF–1.0M

Select item 395992014.

Rescue of Wild-type Mumps Virus from a Strain Associated with Recent Outbreaks Helps to Define the Role of the SH ORF in the Pathogenesis of Mumps Virus

Pei Xu, Zhuo Li, Dengyun Sun, Yuan Lin, Jianguo Wu, Paul A. Rota, Biao He

Virology. Author manuscript; available in PMC 2014 Mar 19.

Published in final edited form as: Virology. 2011 Aug 15; 417(1): 126–136. Published online 2011 Jun 14. doi: 10.1016/j.virol.2011.05.003

PMCID:: PMC3959920

Abstract Article PDF–6.0M

Select item 390149115.

Novel Paramyxovirus Associated with Severe Acute Febrile Disease, South Sudan and Uganda, 2012

César G. Albariño, Michael Foltzer, Jonathan S. Towner, Lory A. Rowe, Shelley Campbell, Carlos M. Jaramillo, Brian H. Bird, DeeAnn M. Reeder, Megan E. Vodzak, Paul Rota, Maureen G. Metcalfe, Christina F. Spiropoulou, Barbara Knust, Joel P. Vincent, Michael A. Frace, Stuart T. Nichol, Pierre E. Rollin, Ute Ströher

Emerg Infect Dis. 2014 Feb; 20(2): 211–216. doi: 10.3201/eid2002.131620