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Select item 70021041.

Whole‐genome comparison between the type strain of Halobacterium salinarum (DSM 3754^T) and the laboratory strains R1 and NRC‐1

Friedhelm Pfeiffer, Gerald Losensky, Anita Marchfelder, Bianca Habermann, Mike Dyall‐Smith

Microbiologyopen. 2020 Feb; 9(2): e974. Published online 2019 Dec 3. doi: 10.1002/mbo3.974

PMCID:: PMC7002104

Abstract Article PDF–2.7M

Select item 66247602.

The Genome Sequence of the Halobacterium salinarum Type Strain Is Closely Related to That of Laboratory Strains NRC-1 and R1

Friedhelm Pfeiffer, Anita Marchfelder, Bianca Habermann, Mike L. Dyall-Smith

Microbiol Resour Announc. 2019 Jul; 8(28): e00429-19. Published online 2019 Jul 11. doi: 10.1128/MRA.00429-19

PMCID:: PMC6624760

Abstract Article PDF–150K

Select item 65913183.

N-Glycosylation Is Important for Halobacterium salinarum Archaellin Expression, Archaellum Assembly and Cell Motility

Marianna Zaretsky, Cynthia L. Darnell, Amy K. Schmid, Jerry Eichler

Front Microbiol. 2019; 10: 1367. Published online 2019 Jun 18. doi: 10.3389/fmicb.2019.01367

PMCID:: PMC6591318

Abstract Article PDF–1.9M

Select item 62024544.

Copy number variation is associated with gene expression change in archaea

Keely A. Dulmage, Cynthia L. Darnell, Angie Vreugdenhil, Amy K. Schmid

Microb Genom. 2018 Sep; 4(9): e000210. Published online 2018 Aug 24. doi: 10.1099/mgen.0.000210

PMCID:: PMC6202454

Abstract Article PDF–3.2M

Select item 51725475.

A Comprehensive Software Suite for the Analysis of cDNAs

Kazuharu Arakawa, Haruo Suzuki, Kosuke Fujishima, Kenji Fujimoto, Sho Ueda, Motomu Matsui, Masaru Tomita

Genomics Proteomics Bioinformatics. 2005; 3(3): 179–188. Published online 2016 Nov 28. doi: 10.1016/S1672-0229(05)03023-8

PMCID:: PMC5172547

Abstract Article PDF–541K

Select item 45001466.

A Manual Curation Strategy to Improve Genome Annotation: Application to a Set of Haloarchael Genomes

Friedhelm Pfeiffer, Dieter Oesterhelt

Life (Basel) 2015 Jun; 5(2): 1427–1444. Published online 2015 Jun 2. doi: 10.3390/life5021427

PMCID:: PMC4500146

Abstract Article PDF–909K

Select item 43908877.

Phylogeny and Taxonomy of Archaea: A Comparison of the Whole-Genome-Based CVTree Approach with 16S rRNA Sequence Analysis

Guanghong Zuo, Zhao Xu, Bailin Hao

Life (Basel) 2015 Mar; 5(1): 949–968. Published online 2015 Mar 17. doi: 10.3390/life5010949

PMCID:: PMC4390887

Abstract Article PDF–1019K

Select item 42927708.

Novel pili-like surface structures of Halobacterium salinarum strain R1 are crucial for surface adhesion

Gerald Losensky, Lucia Vidakovic, Andreas Klingl, Felicitas Pfeifer, Sabrina Fröls

Front Microbiol. 2014; 5: 755. Published online 2015 Jan 13. doi: 10.3389/fmicb.2014.00755

PMCID:: PMC4292770

Abstract Article PDF–3.9M

Select item 41871969.

Properties of Halococcus salifodinae, an Isolate from Permian Rock Salt Deposits, Compared with Halococci from Surface Waters

Andrea Legat, Ewald B. M. Denner, Marion Dornmayr-Pfaffenhuemer, Peter Pfeiffer, Burkhard Knopf, Harald Claus, Claudia Gruber, Helmut König, Gerhard Wanner, Helga Stan-Lotter

Life (Basel) 2013 Mar; 3(1): 244–259. Published online 2013 Feb 28. doi: 10.3390/life3010244

PMCID:: PMC4187196

Abstract Article PDF–293K

Select item 418265510.

Divalent Metal Ion-Induced Folding Mechanism of RNase H1 from Extreme Halophilic Archaeon Halobacterium sp. NRC-1

Elias Tannous, Shigenori Kanaya

PLoS One. 2014; 9(9): e109016. Published online 2014 Sep 30. doi: 10.1371/journal.pone.0109016

PMCID:: PMC4182655

Abstract Article PDF–1.8M

Select item 416956711.

Transcription Start Site Associated RNAs (TSSaRNAs) Are Ubiquitous in All Domains of Life

Livia S. Zaramela, Ricardo Z. N. Vêncio, Felipe ten-Caten, Nitin S. Baliga, Tie Koide

PLoS One. 2014; 9(9): e107680. Published online 2014 Sep 19. doi: 10.1371/journal.pone.0107680

PMCID:: PMC4169567

Abstract Article PDF–3.2M

Select item 416401012.

Ori-Finder 2, an integrated tool to predict replication origins in the archaeal genomes

Hao Luo, Chun-Ting Zhang, Feng Gao

Front Microbiol. 2014; 5: 482. Published online 2014 Sep 15. doi: 10.3389/fmicb.2014.00482

PMCID:: PMC4164010

Abstract Article PDF–1.9M

Select item 409684813.

Bioengineering radioresistance by overproduction of RPA, a mammalian-type single-stranded DNA-binding protein, in a halophilic archaeon

Ram Karan, Priya DasSarma, Elizabeth Balcer-Kubiczek, Rueyhung Roc Weng, Chen-Chung Liao, David R. Goodlett, Wailap Victor Ng, Shiladitya DasSarma

Appl Microbiol Biotechnol. Author manuscript; available in PMC 2015 Feb 1.

Published in final edited form as: Appl Microbiol Biotechnol. 2014 Feb; 98(4): 1737–1747. Published online 2013 Nov 29. doi: 10.1007/s00253-013-5368-x

PMCID:: PMC4096848

Abstract Article PDF–349K

Select item 406088314.

An evolutionarily conserved RNase-based mechanism for repression of transcriptional positive autoregulation

Elisabeth J. Wurtmann, Alexander V. Ratushny, Min Pan, Karlyn D. Beer, John D. Aitchison, Nitin S. Baliga

Mol Microbiol. Author manuscript; available in PMC 2015 Apr 1.

Published in final edited form as: Mol Microbiol. 2014 Apr; 92(2): 369–382. Published online 2014 Mar 19. doi: 10.1111/mmi.12564

PMCID:: PMC4060883

Abstract Article PDF–1.1M

Select item 403603715.

Prokaryotic Diversity in Aran-Bidgol Salt Lake, the Largest Hypersaline Playa in Iran

Ali Makhdoumi-Kakhki, Mohammad Ali Amoozegar, Bahram Kazemi, Lejla Pašić, Antonio Ventosa

Microbes Environ. 2012 Mar; 27(1): 87–93. Published online 2011 Dec 15. doi: 10.1264/jsme2.ME11267

PMCID:: PMC4036037

Abstract Article PDF–950K

Select item 395762916.

Model Organisms Retain an “Ecological Memory” of Complex Ecologically Relevant Environmental Variation

Karlyn D. Beer, Elisabeth J. Wurtmann, Nicolás Pinel, Nitin S. Baliga

Appl Environ Microbiol. 2014 Mar; 80(6): 1821–1831. doi: 10.1128/AEM.03280-13

PMCID:: PMC3957629

Abstract Article PDF–3.1M

Select item 381213517.

GenomeFingerprinter: The Genome Fingerprint and the Universal Genome Fingerprint Analysis for Systematic Comparative Genomics

Yuncan Ai, Hannan Ai, Fanmei Meng, Lei Zhao

PLoS One. 2013; 8(10): e77912. Published online 2013 Oct 29. doi: 10.1371/journal.pone.0077912

PMCID:: PMC3812135

Abstract Article PDF–1.7M

Select item 378300918.

Subcommittee on the taxonomy of Halobacteriaceae and Subcommittee on the taxonomy of Halomonadaceae: Minutes of the joint open meeting, 24 June 2013, Storrs, Connecticut, USA

Aharon Oren, Antonio Ventosa

Int J Syst Evol Microbiol. 2013 Sep; 63(Pt 9): 3540–3544. doi: 10.1099/ijs.0.055988-0