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Select item 70021041.

Whole‐genome comparison between the type strain of Halobacterium salinarum (DSM 3754^T) and the laboratory strains R1 and NRC‐1

Friedhelm Pfeiffer, Gerald Losensky, Anita Marchfelder, Bianca Habermann, Mike Dyall‐Smith

Microbiologyopen. 2020 Feb; 9(2): e974. Published online 2019 Dec 3. doi: 10.1002/mbo3.974

PMCID:: PMC7002104

Abstract Article PDF–2.7M

Select item 66247602.

The Genome Sequence of the Halobacterium salinarum Type Strain Is Closely Related to That of Laboratory Strains NRC-1 and R1

Friedhelm Pfeiffer, Anita Marchfelder, Bianca Habermann, Mike L. Dyall-Smith

Microbiol Resour Announc. 2019 Jul; 8(28): e00429-19. Published online 2019 Jul 11. doi: 10.1128/MRA.00429-19

PMCID:: PMC6624760

Abstract Article PDF–150K

Select item 65913183.

N-Glycosylation Is Important for Halobacterium salinarum Archaellin Expression, Archaellum Assembly and Cell Motility

Marianna Zaretsky, Cynthia L. Darnell, Amy K. Schmid, Jerry Eichler

Front Microbiol. 2019; 10: 1367. Published online 2019 Jun 18. doi: 10.3389/fmicb.2019.01367

PMCID:: PMC6591318

Abstract Article PDF–1.9M

Select item 62024544.

Copy number variation is associated with gene expression change in archaea

Keely A. Dulmage, Cynthia L. Darnell, Angie Vreugdenhil, Amy K. Schmid

Microb Genom. 2018 Sep; 4(9): e000210. Published online 2018 Aug 24. doi: 10.1099/mgen.0.000210

PMCID:: PMC6202454

Abstract Article PDF–3.2M

Select item 45001465.

A Manual Curation Strategy to Improve Genome Annotation: Application to a Set of Haloarchael Genomes

Friedhelm Pfeiffer, Dieter Oesterhelt

Life (Basel) 2015 Jun; 5(2): 1427–1444. Published online 2015 Jun 2. doi: 10.3390/life5021427

PMCID:: PMC4500146

Abstract Article PDF–909K

Select item 41695676.

Transcription Start Site Associated RNAs (TSSaRNAs) Are Ubiquitous in All Domains of Life

Livia S. Zaramela, Ricardo Z. N. Vêncio, Felipe ten-Caten, Nitin S. Baliga, Tie Koide

PLoS One. 2014; 9(9): e107680. Published online 2014 Sep 19. doi: 10.1371/journal.pone.0107680

PMCID:: PMC4169567

Abstract Article PDF–3.2M

Select item 40608837.

An evolutionarily conserved RNase-based mechanism for repression of transcriptional positive autoregulation

Elisabeth J. Wurtmann, Alexander V. Ratushny, Min Pan, Karlyn D. Beer, John D. Aitchison, Nitin S. Baliga

Mol Microbiol. Author manuscript; available in PMC 2015 Apr 1.

Published in final edited form as: Mol Microbiol. 2014 Apr; 92(2): 369–382. Published online 2014 Mar 19. doi: 10.1111/mmi.12564

PMCID:: PMC4060883

Abstract Article PDF–1.1M

Select item 39576298.

Model Organisms Retain an “Ecological Memory” of Complex Ecologically Relevant Environmental Variation

Karlyn D. Beer, Elisabeth J. Wurtmann, Nicolás Pinel, Nitin S. Baliga

Appl Environ Microbiol. 2014 Mar; 80(6): 1821–1831. doi: 10.1128/AEM.03280-13

PMCID:: PMC3957629

Abstract Article PDF–3.1M

Select item 37830099.

Subcommittee on the taxonomy of Halobacteriaceae and Subcommittee on the taxonomy of Halomonadaceae: Minutes of the joint open meeting, 24 June 2013, Storrs, Connecticut, USA

Aharon Oren, Antonio Ventosa

Int J Syst Evol Microbiol. 2013 Sep; 63(Pt 9): 3540–3544. doi: 10.1099/ijs.0.055988-0

PMCID:: PMC3783009

Article PDF–82K

Select item 352866510.

Diversity and evolution of multiple orc/cdc6-adjacent replication origins in haloarchaea

Zhenfang Wu, Hailong Liu, Jingfang Liu, Xiaoqing Liu, Hua Xiang

BMC Genomics. 2012; 13: 478. Published online 2012 Sep 14. doi: 10.1186/1471-2164-13-478

PMCID:: PMC3528665

Abstract Article PDF–2.7M

Select item 340409611.

Sequencing of Seven Haloarchaeal Genomes Reveals Patterns of Genomic Flux

Erin A. Lynch, Morgan G. I. Langille, Aaron Darling, Elizabeth G. Wilbanks, Caitlin Haltiner, Katie S. Y. Shao, Michael O. Starr, Clotilde Teiling, Timothy T. Harkins, Robert A. Edwards, Jonathan A. Eisen, Marc T. Facciotti

PLoS One. 2012; 7(7): e41389. Published online 2012 Jul 24. doi: 10.1371/journal.pone.0041389

PMCID:: PMC3404096

Abstract Article PDF–960K

Select item 332629212.

Transcriptome-wide discovery of circular RNAs in Archaea

Miri Danan, Schraga Schwartz, Sarit Edelheit, Rotem Sorek

Nucleic Acids Res. 2012 Apr; 40(7): 3131–3142. Published online 2011 Dec 2. doi: 10.1093/nar/gkr1009

PMCID:: PMC3326292

Abstract Article PDF–4.5M

Select item 326171113.

Niche adaptation by expansion and reprogramming of general transcription factors

Serdar Turkarslan, David J Reiss, Goodwin Gibbins, Wan Lin Su, Min Pan, J Christopher Bare, Christopher L Plaisier, Nitin S Baliga

Mol Syst Biol. 2011; 7: 554. Published online 2011 Nov 22. doi: 10.1038/msb.2011.87

PMCID:: PMC3261711

Abstract Article PDF–1.9M

Select item 271087314.

Prevalence of transcription promoters within archaeal operons and coding sequences

Tie Koide, David J Reiss, J Christopher Bare, Wyming Lee Pang, Marc T Facciotti, Amy K Schmid, Min Pan, Bruz Marzolf, Phu T Van, Fang-Yin Lo, Abhishek Pratap, Eric W Deutsch, Amelia Peterson, Dan Martin, Nitin S Baliga

Mol Syst Biol. 2009; 5: 285. Published online 2009 Jun 16. doi: 10.1038/msb.2009.42