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Items: 1 to 20 of 44

1.
Computational analysis of the binding mode of 8-oxo-guanine to formamidopyrimidine-DNA glycosylase
Kun Song, Viktor Hornak, Carlos de los Santos, Arthur P. Grollman, Carlos Simmerling
Biochemistry. Author manuscript; available in PMC 2021 Jul 22.
Published in final edited form as: Biochemistry. 2006 Sep 12; 45(36): 10886–10894. doi: 10.1021/bi060380m
PMCID:
PMC8295719
AbstractArticlePDF–752K
2.
The role of Fpg protein in UVC-induced DNA lesions
A C T Silva-Júnior, L M B O Asad, I Felzenszwalb, N R Asad
Redox Rep. 2012; 17(3): 95–100. Published online 2013 Jul 19. doi: 10.1179/1351000212Y.0000000006
PMCID:
PMC6837349
AbstractArticlePDF–241K
3.
Molecular simulations reveal a common binding mode for glycosylase binding of oxidatively damaged DNA lesions
Kun Song, Catherine Kelso, Carlos de los Santos, Arthur P. Grollman, Carlos Simmerling
J Am Chem Soc. Author manuscript; available in PMC 2016 Mar 31.
Published in final edited form as: J Am Chem Soc. 2007 Nov 28; 129(47): 14536–14537. Published online 2007 Nov 8. doi: 10.1021/ja075128w
PMCID:
PMC4814714
AbstractArticlePDF–247K
4.
Accelerated Repair and Reduced Mutagenicity of DNA Damage Induced by Cigarette Smoke in Human Bronchial Cells Transfected with E.coli Formamidopyrimidine DNA Glycosylase
Mara Foresta, Alberto Izzotti, Sebastiano La Maestra, Rosanna Micale, Alessandro Poggi, Donatella Vecchio, Guido Frosina
PLoS One. 2014; 9(1): e87984. Published online 2014 Jan 31. doi: 10.1371/journal.pone.0087984
PMCID:
PMC3909288
AbstractArticlePDF–3.1M
5.
Structural and Biochemical Analysis of DNA Helix Invasion by the Bacterial 8-Oxoguanine DNA Glycosylase MutM
Rou-Jia Sung, Michael Zhang, Yan Qi, Gregory L. Verdine
J Biol Chem. 2013 Apr 5; 288(14): 10012–10023. Published online 2013 Feb 12. doi: 10.1074/jbc.M112.415612
PMCID:
PMC3617240
AbstractArticlePDF–3.2M
6.
Sequence-dependent Structural Variation in DNA Undergoing Intrahelical Inspection by the DNA glycosylase MutM
Rou-Jia Sung, Michael Zhang, Yan Qi, Gregory L. Verdine
J Biol Chem. 2012 May 25; 287(22): 18044–18054. Published online 2012 Mar 30. doi: 10.1074/jbc.M111.313635
PMCID:
PMC3365742
AbstractArticlePDF–2.7M
7.
Modulation of the Turnover of Formamidopyrimidine DNA Glycosylase (Fpg)
Michael Harbut, Michael Meador, M.L. Dodson, R. Stephen Lloyd
Biochemistry. Author manuscript; available in PMC 2011 Sep 27.
Published in final edited form as: Biochemistry. 2006 Jun 13; 45(23): 7341–7346. doi: 10.1021/bi052383p
PMCID:
PMC3181173
AbstractArticlePDF–769K
8.
Escherichia Coli Fpg Glycosylase is Nonrendundant and Required for the Rapid Global Repair of Oxidized Purine and Pyrimidine Damage In Vivo
Brandy J. Schalow, Charmain T Courcelle, Justin Courcelle
J Mol Biol. Author manuscript; available in PMC 2012 Jul 8.
Published in final edited form as: J Mol Biol. 2011 Jul 8; 410(2): 183–193. Published online 2011 May 13. doi: 10.1016/j.jmb.2011.05.004
PMCID:
PMC3156590
AbstractArticlePDF–874K
9.
Unusual Structural Features of Hydantoin Lesions Translate into Efficient Recognition by Escherichia coli Fpg
Nirmala Krishnamurthy, James G. Muller, Cynthia J. Burrows, Sheila S. David
Biochemistry. Author manuscript; available in PMC 2008 Aug 21.
Published in final edited form as: Biochemistry. 2007 Aug 21; 46(33): 9355–9365. Published online 2007 Jul 27. doi: 10.1021/bi602459v
PMCID:
PMC2442889
AbstractArticlePDF–965K
10.
A continuous hyperchromicity assay to characterize the kinetics and thermodynamics of DNA lesion recognition and base excision
Conceição A. S. A. Minetti, David P. Remeta, Kenneth J. Breslauer
Proc Natl Acad Sci U S A. 2008 Jan 8; 105(1): 70–75. Published online 2008 Jan 2. doi: 10.1073/pnas.0710363105
PMCID:
PMC2224234
AbstractArticlePDF–444K
11.
Delta-elimination in the repair of AP (apurinic/apyrimidinic) sites in DNA.
V Bailly, M Derydt, W G Verly
Biochem J. 1989 Aug 1; 261(3): 707–713. doi: 10.1042/bj2610707
PMCID:
PMC1138888
SummaryPage BrowsePDF–1.5M
12.
Mechanism of DNA strand nicking at apurinic/apyrimidinic sites by Escherichia coli [formamidopyrimidine]DNA glycosylase.
V Bailly, W G Verly, T O'Connor, J Laval
Biochem J. 1989 Sep 1; 262(2): 581–589. doi: 10.1042/bj2620581
PMCID:
PMC1133308
SummaryPage BrowsePDF–2.0M
13.
Formamidopyrimidine-DNA glycosylase of Escherichia coli: cloning and sequencing of the fpg structural gene and overproduction of the protein.
S Boiteux, T R O'Connor, J Laval
EMBO J. 1987 Oct; 6(10): 3177–3183. doi: 10.1002/j.1460-2075.1987.tb02629.x
PMCID:
PMC553760
SummaryPage BrowsePDF–1.4M
14.
Pre-steady-state kinetics shows differences in processing of various DNA lesions by Escherichia coli formamidopyrimidine-DNA glycosylase
Vladimir V. Koval, Nikita A. Kuznetsov, Dmitry O. Zharkov, Alexander A. Ishchenko, Kenneth T. Douglas, Georgy A. Nevinsky, Olga S. Fedorova
Nucleic Acids Res. 2004; 32(3): 926–935. Published online 2004 Feb 9. doi: 10.1093/nar/gkh237
PMCID:
PMC373384
AbstractArticlePDF–281K
15.
MutM, a protein that prevents G.C----T.A transversions, is formamidopyrimidine-DNA glycosylase.
M L Michaels, L Pham, C Cruz, J H Miller
Nucleic Acids Res. 1991 Jul 11; 19(13): 3629–3632. doi: 10.1093/nar/19.13.3629
PMCID:
PMC328390
SummaryPage BrowsePDF–812K
16.
DNA containing a chemically reduced apurinic site is a high affinity ligand for the E. coli formamidopyrimidine-DNA glycosylase.
B Castaing, S Boiteux, C Zelwer
Nucleic Acids Res. 1992 Feb 11; 20(3): 389–394. doi: 10.1093/nar/20.3.389
PMCID:
PMC310397
SummaryPage BrowsePDF–1.1M
17.
Cleavage and binding of a DNA fragment containing a single 8-oxoguanine by wild type and mutant FPG proteins.
B Castaing, A Geiger, H Seliger, P Nehls, J Laval, C Zelwer, S Boiteux
Nucleic Acids Res. 1993 Jun 25; 21(12): 2899–2905. doi: 10.1093/nar/21.12.2899
PMCID:
PMC309678
SummaryPage BrowsePDF–1.6M
18.
Recognition of oxidized abasic sites by repair endonucleases.
M Häring, H Rüdiger, B Demple, S Boiteux, B Epe
Nucleic Acids Res. 1994 Jun 11; 22(11): 2010–2015. doi: 10.1093/nar/22.11.2010
PMCID:
PMC308114
SummaryPage BrowsePDF–1.1M
19.
Physical association of the 2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase of Escherichia coli and an activity nicking DNA at apurinic/apyrimidinic sites.
T R O'Connor, J Laval
Proc Natl Acad Sci U S A. 1989 Jul; 86(14): 5222–5226. doi: 10.1073/pnas.86.14.5222
PMCID:
PMC297593
SummaryPage BrowsePDF–1.2M
20.
AP site structural determinants for Fpg specific recognition.
B Castaing, J L Fourrey, N Hervouet, M Thomas, S Boiteux, C Zelwer
Nucleic Acids Res. 1999 Jan 15; 27(2): 608–615. doi: 10.1093/nar/27.2.608
PMCID:
PMC148222
SummaryPDF–389K

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