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Select item 5564051.

Impairment of replication fork progression mediates RNA polII transcription-associated recombination

Félix Prado, Andrés Aguilera

EMBO J. 2005 Mar 23; 24(6): 1267–1276. Published online 2005 Mar 3. doi: 10.1038/sj.emboj.7600602

PMCID:: PMC556405

Abstract Article PDF–357K

Select item 3877732.

Anatomy and Dynamics of DNA Replication Fork Movement in Yeast Telomeric Regions

Svetlana Makovets, Ira Herskowitz, Elizabeth H. Blackburn

Mol Cell Biol. 2004 May; 24(9): 4019–4031. doi: 10.1128/MCB.24.9.4019-4031.2004

PMCID:: PMC387773

Abstract Article PDF–593K

Select item 1863153.

Saccharomyces Rrm3p, a 5′ to 3′ DNA helicase that promotes replication fork progression through telomeric and subtelomeric DNA

Andreas S. Ivessa, Jin-Qiu Zhou, Vince P. Schulz, Ellen K. Monson, Virginia A. Zakian

Genes Dev. 2002 Jun 1; 16(11): 1383–1396. doi: 10.1101/gad.982902

PMCID:: PMC186315

Abstract Article PDF–405K

Select item 108997764.

Rrm3 and Pif1 division of labor during replication through leading and lagging strand G-quadruplex

Mor Varon, Daniel Dovrat, Jonathan Heuzé, Ioannis Tsirkas, Saurabh P Singh, Philippe Pasero, Roberto Galletto, Amir Aharoni

Nucleic Acids Res. 2024 Feb 28; 52(4): 1753–1762. Published online 2023 Dec 20. doi: 10.1093/nar/gkad1205

PMCID:: PMC10899776

Abstract Article PDF–1.2M

Select item 64771535.

Pif1-Family Helicases Support Fork Convergence during DNA Replication Termination in Eukaryotes

Tom D. Deegan, Jonathan Baxter, María Ángeles Ortiz Bazán, Joseph T.P. Yeeles, Karim P.M. Labib

Mol Cell. 2019 Apr 18; 74(2): 231–244.e9. doi: 10.1016/j.molcel.2019.01.040

PMCID:: PMC6477153

Abstract Article PDF–4.1M

Select item 54381896.

A new role for Rrm3 in repair of replication-born DNA breakage by sister chromatid recombination

Sandra Muñoz-Galván, María García-Rubio, Pedro Ortega, Jose F. Ruiz, Sonia Jimeno, Benjamin Pardo, Belén Gómez-González, Andrés Aguilera

PLoS Genet. 2017 May; 13(5): e1006781. Published online 2017 May 5. doi: 10.1371/journal.pgen.1006781

PMCID:: PMC5438189

Abstract Article PDF–6.4M

Select item 52964037.

Pif1-family helicases cooperate to suppress widespread replication fork arrest at tRNA genes

Joseph S. Osmundson, Jayashree Kumar, Rani Yeung, Duncan J. Smith

Nat Struct Mol Biol. Author manuscript; available in PMC 2017 Jun 19.

Published in final edited form as: Nat Struct Mol Biol. 2017 Feb; 24(2): 162–170. Published online 2016 Dec 19. doi: 10.1038/nsmb.3342

PMCID:: PMC5296403

Abstract Article PDF–2.0M

Select item 48180398.

Excess of Yra1 RNA-Binding Factor Causes Transcription-Dependent Genome Instability, Replication Impairment and Telomere Shortening

Sandra Gavaldá, José M. Santos-Pereira, María L. García-Rubio, Rosa Luna, Andrés Aguilera

PLoS Genet. 2016 Apr; 12(4): e1005966. Published online 2016 Apr 1. doi: 10.1371/journal.pgen.1005966

PMCID:: PMC4818039

Abstract Article PDF–8.0M

Select item 31340809.

Tight protein–DNA interactions favor gene silencing

Marion Dubarry, Isabelle Loïodice, Chunlong L. Chen, Claude Thermes, Angela Taddei

Genes Dev. 2011 Jul 1; 25(13): 1365–1370. doi: 10.1101/gad.611011

PMCID:: PMC3134080

Abstract Article PDF–541K

Select item 304147710.

Replication termination at eukaryotic chromosomes is mediated by Top2 and occurs at genomic loci containing pausing elements

Daniele Fachinetti, Rodrigo Bermejo, Andrea Cocito, Simone Minardi, Yuki Katou, Yutaka Kanoh, Katsuhiko Shirahige, Anna Azvolinsky, Virginia A. Zakian, Marco Foiani

Mol Cell. Author manuscript; available in PMC 2011 Aug 27.

Published in final edited form as: Mol Cell. 2010 Aug 27; 39(4): 595–605. doi: 10.1016/j.molcel.2010.07.024

PMCID:: PMC3041477

Abstract Article PDF–5.0M

Select item 272807011.

Highly transcribed RNA polymerase II genes are impediments to replication fork progression in Saccharomyces cerevisiae

Anna Azvolinsky, Paul G. Giresi, Jason D. Lieb, Virginia A. Zakian

Mol Cell. Author manuscript; available in PMC 2010 Jun 26.

Published in final edited form as: Mol Cell. 2009 Jun 26; 34(6): 722–734. doi: 10.1016/j.molcel.2009.05.022

PMCID:: PMC2728070

Abstract Article PDF–2.5M

Select item 163514612.

The S. cerevisiae Rrm3p DNA helicase moves with the replication forkand affects replication of allyeast chromosomes

Anna Azvolinsky, Stephen Dunaway, Jorge Z. Torres, Jessica B. Bessler, Virginia A. Zakian

Genes Dev. 2006 Nov 15; 20(22): 3104–3116. doi: 10.1101/gad.1478906

PMCID:: PMC1635146

Abstract Article PDF–803K

Select item 804567813.

Genome stability is guarded by yeast Rtt105 through multiple mechanisms

Yves Corda, Laetitia Maestroni, Pierre Luciano, Maria Y Najem, Vincent Géli

Genetics. 2021 Feb; 217(2): iyaa035. Published online 2021 Feb 3. doi: 10.1093/genetics/iyaa035

PMCID:: PMC8045678

Abstract Article PDF–969K

Select item 541395514.

PIF1 family DNA helicases suppress R-loop mediated genome instability at tRNA genes

Phong Lan Thao Tran, Thomas J. Pohl, Chi-Fu Chen, Angela Chan, Sebastian Pott, Virginia A. Zakian

Nat Commun. 2017; 8: 15025. Published online 2017 Apr 21. doi: 10.1038/ncomms15025

PMCID:: PMC5413955

Abstract Article PDF–888K

Select item 477864715.

Genome-wide localization of Rrm3 and Pif1 DNA helicases at stalled active and inactive DNA replication forks of Saccharomyces cerevisiae

Silvia Emma Rossi, Walter Carotenuto, Michele Giannattasio

Genom Data. 2016 Mar; 7: 162–165. Published online 2015 Dec 1. doi: 10.1016/j.gdata.2015.11.024

PMCID:: PMC4778647

Abstract Article PDF–292K

Select item 423176416.

A genome-wide function of THSC/TREX-2 at active genes prevents transcription–replication collisions

José M. Santos-Pereira, María L. García-Rubio, Cristina González-Aguilera, Rosa Luna, Andrés Aguilera

Nucleic Acids Res. 2014 Oct 29; 42(19): 12000–12014. Published online 2014 Oct 7. doi: 10.1093/nar/gku906

PMCID:: PMC4231764

Abstract Article PDF–5.6M

Select item 382079717.

Recombinogenic Conditions Influence Partner Choice in Spontaneous Mitotic Recombination

James D. Cauwood, Anthony L. Johnson, Alexander Widger, Rita S. Cha

PLoS Genet. 2013 Nov; 9(11): e1003931. Published online 2013 Nov 7. doi: 10.1371/journal.pgen.1003931

PMCID:: PMC3820797

Abstract Article PDF–2.2M

Select item 257322718.

The Schizosaccharomyces pombe Pfh1p DNA Helicase Is Essential for the Maintenance of Nuclear and Mitochondrial DNA

Stefan F. Pinter, Sarah D. Aubert, Virginia A. Zakian

Mol Cell Biol. 2008 Nov; 28(21): 6594–6608. Published online 2008 Aug 25. doi: 10.1128/MCB.00191-08

PMCID:: PMC2573227

Abstract Article PDF–2.9M

Select item 114244319.

The Conserved Mec1/Rad53 Nuclear Checkpoint Pathway Regulates Mitochondrial DNA Copy Number in Saccharomyces cerevisiae

Sean D. Taylor, Hong Zhang, Jana S. Eaton, Matthew S. Rodeheffer, Maria A. Lebedeva, Thomas W. O'Rourke, Wolfram Siede, Gerald S. Shadel

Mol Biol Cell. 2005 Jun; 16(6): 3010–3018. doi: 10.1091/mbc.E05-01-0053

PMCID:: PMC1142443

Abstract Article PDF–200K

Select item 632570720.

Two Pif1 Family DNA Helicases Cooperate in Centromere Replication and Segregation in Saccharomyces cerevisiae

Chi-Fu Chen, Thomas J. Pohl, Sebastian Pott, Virginia A. Zakian

Genetics. 2019 Jan; 211(1): 105–119. Published online 2018 Nov 15. doi: 10.1534/genetics.118.301710

PMCID:: PMC6325707

Abstract Article PDF–2.1M

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