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Items: 1 to 20 of 149

1.
DNA polymerase η contributes to genome-wide lagging strand synthesis
Katrin Kreisel, Martin K M Engqvist, Josephine Kalm, Liam J Thompson, Martin Boström, Clara Navarrete, John P McDonald, Erik Larsson, Roger Woodgate, Anders R Clausen
Nucleic Acids Res. 2019 Mar 18; 47(5): 2425–2435. Published online 2018 Dec 28. doi: 10.1093/nar/gky1291
PMCID:
PMC6411934
AbstractArticlePDF–4.7M
2.
The active site residues Gln55 and Arg73 play a key role in DNA damage bypass by S. cerevisiae Pol η
Elizaveta O. Boldinova, Artem Ignatov, Andrey Kulbachinskiy, Alena V. Makarova
Sci Rep. 2018; 8: 10314. Published online 2018 Jul 9. doi: 10.1038/s41598-018-28664-8
PMCID:
PMC6037775
AbstractArticlePDF–4.0M
3.
Comparative molecular dynamics studies of heterozygous open reading frames of DNA polymerase eta (η) in pathogenic yeast Candida albicans
Suresh Satpati, Kodavati Manohar, Narottam Acharya, Anshuman Dixit
Sci Rep. 2017; 7: 41087. Published online 2017 Jan 25. doi: 10.1038/srep41087
PMCID:
PMC5264235
AbstractArticlePDF–2.7M
4.
Kinetic analysis of bypass of 7,8-dihydro-8-oxo-2′-deoxyguanosine by the catalytic core of yeast DNA polymerase η
Qizhen Xue, Mengyu Zhong, Binyan Liu, Yong Tang, Zeliang Wei, F. Peter Guengerich, Huidong Zhang
Biochimie. Author manuscript; available in PMC 2016 Dec 28.
Published in final edited form as: Biochimie. 2016 Feb; 121: 161–169. Published online 2015 Dec 15. doi: 10.1016/j.biochi.2015.12.009
PMCID:
PMC5193378
AbstractArticlePDF–784K
5.
Structural basis for error-free replication of oxidatively damaged DNA by yeast DNA polymerase η
Timothy D. Silverstein, Rinku Jain, Robert E. Johnson, Louise Prakash, Satya Prakash, Aneel K. Aggarwal
Structure. Author manuscript; available in PMC 2011 Nov 10.
Published in final edited form as: Structure. 2010 Nov 10; 18(11): 1463–1470. doi: 10.1016/j.str.2010.08.019
PMCID:
PMC3044447
AbstractArticlePDF–3.9M
6.
Structural basis for the suppression of skin cancers by DNA polymerase η
Timothy D. Silverstein, Robert E. Johnson, Rinku Jain, Louise Prakash, Satya Prakash, Aneel K. Aggarwal
Nature. Author manuscript; available in PMC 2011 Jun 24.
Published in final edited form as: Nature. 2010 Jun 24; 465(7301): 1039–1043. doi: 10.1038/nature09104
PMCID:
PMC3030469
AbstractArticlePDF–965K
7.
Replication Past the γ-Radiation-Induced Guanine-Thymine Cross-Link G[8,5-Me]T by Human and Yeast DNA Polymerase η
Paromita Raychaudhury, Ashis K. Basu
J Nucleic Acids. 2010; 2010: 101495. Published online 2010 Sep 13. doi: 10.4061/2010/101495
PMCID:
PMC2946590
AbstractArticlePDF–1.2M
8.
Effect of N3-Methyladenine and an Isosteric Stable Analogue on DNA Polymerization
Samuel Settles, Ruo-Wen Wang, Gilberto Fronza, Barry Gold
J Nucleic Acids. 2010; 2010: 426505. Published online 2010 Sep 19. doi: 10.4061/2010/426505
PMCID:
PMC2945674
AbstractArticlePDF–2.4M
9.
Pre-Steady-State Kinetic Analysis of Truncated and Full-Length Saccharomyces cerevisiae DNA Polymerase Eta
Jessica A. Brown, Likui Zhang, Shanen M. Sherrer, John-Stephen Taylor, Peter M. J. Burgers, Zucai Suo
J Nucleic Acids. 2010; 2010: 871939. Published online 2010 Jul 25. doi: 10.4061/2010/871939
PMCID:
PMC2925389
AbstractArticlePDF–908K
10.
Mechanism of Efficient and Accurate Nucleotide Incorporation Opposite 7,8-Dihydro-8-Oxoguanine by Saccharomyces cerevisiae DNA Polymerase η
Karissa D. Carlson, M. Todd Washington
Mol Cell Biol. 2005 Mar; 25(6): 2169–2176. doi: 10.1128/MCB.25.6.2169-2176.2005
PMCID:
PMC1061627
AbstractArticlePDF–250K
11.
Enzymatic switching for efficient and accurate translesion DNA replication
Scott D. McCulloch, Robert J. Kokoska, Olga Chilkova, Carrie M. Welch, Erik Johansson, Peter M. J. Burgers, Thomas A. Kunkel
Nucleic Acids Res. 2004; 32(15): 4665–4675. Published online 2004 Aug 27. doi: 10.1093/nar/gkh777
PMCID:
PMC516052
AbstractArticlePDF–688K
12.
Mechanism of nucleotide incorporation opposite a thymine-thymine dimer by yeast DNA polymerase η
M. Todd Washington, Louise Prakash, Satya Prakash
Proc Natl Acad Sci U S A. 2003 Oct 14; 100(21): 12093–12098. Published online 2003 Oct 3. doi: 10.1073/pnas.2134223100
PMCID:
PMC218718
AbstractArticlePDF–453K
13.
Requirement of Watson-Crick Hydrogen Bonding for DNA Synthesis by Yeast DNA Polymerase η
M. Todd Washington, Sandra A. Helquist, Eric T. Kool, Louise Prakash, Satya Prakash
Mol Cell Biol. 2003 Jul; 23(14): 5107–5112. doi: 10.1128/MCB.23.14.5107-5112.2003
PMCID:
PMC162216
AbstractArticlePDF–139K
14.
Yeast DNA polymerase η makes functional contacts with the DNA minor groove only at the incoming nucleoside triphosphate
M. Todd Washington, William T. Wolfle, Thomas E. Spratt, Louise Prakash, Satya Prakash
Proc Natl Acad Sci U S A. 2003 Apr 29; 100(9): 5113–5118. Published online 2003 Apr 11. doi: 10.1073/pnas.0837578100
PMCID:
PMC154307
AbstractArticlePDF–170K
15.
Deoxynucleotide Triphosphate Binding Mode Conserved in Y Family DNA Polymerases
Robert E. Johnson, José Trincao, Aneel K. Aggarwal, Satya Prakash, Louise Prakash
Mol Cell Biol. 2003 Apr; 23(8): 3008–3012. doi: 10.1128/MCB.23.8.3008-3012.2003
PMCID:
PMC152571
AbstractArticlePDF–265K
16.
Lesion bypass in yeast cells: Pol η participates in a multi-DNA polymerase process
Anne Bresson, Robert P.P. Fuchs
EMBO J. 2002 Jul 15; 21(14): 3881–3887. doi: 10.1093/emboj/cdf363
PMCID:
PMC126109
AbstractArticlePDF–223K
17.
UV-induced T→C transition at a TT photoproduct site is dependent on Saccharomyces cerevisiae polymerase η in vivo
Hong Zhang, Wolfram Siede
Nucleic Acids Res. 2002 Mar 1; 30(5): 1262–1267. doi: 10.1093/nar/30.5.1262
PMCID:
PMC101249
AbstractArticlePDF–145K
18.
Requirement of DNA Polymerase η for Error-Free Bypass of UV-Induced CC and TC Photoproducts
Sung-Lim Yu, Robert E. Johnson, Satya Prakash, Louise Prakash
Mol Cell Biol. 2001 Jan; 21(1): 185–188. doi: 10.1128/MCB.21.1.185-188.2001
PMCID:
PMC88792
AbstractArticlePDF–93K
19.
Acidic Residues Critical for the Activity and Biological Function of Yeast DNA Polymerase η
Christine M. Kondratick, M. Todd Washington, Satya Prakash, Louise Prakash
Mol Cell Biol. 2001 Mar; 21(6): 2018–2025. doi: 10.1128/MCB.21.6.2018-2025.2001
PMCID:
PMC86801
AbstractArticlePDF–751K
20.
Accuracy of thymine–thymine dimer bypass by Saccharomyces cerevisiae DNA polymerase η
M. Todd Washington, Robert E. Johnson, Satya Prakash, Louise Prakash
Proc Natl Acad Sci U S A. 2000 Mar 28; 97(7): 3094–3099. Published online 2000 Mar 21. doi: 10.1073/pnas.050491997
PMCID:
PMC16198
AbstractArticlePDF–243K

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