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Items: 16

1.
Fendrr synergizes with Wnt signalling to regulate fibrosis related genes during lung development via its RNA:dsDNA triplex element
Tamer Ali, Sandra Rogala, Nina M Krause, Jasleen Kaur Bains, Maria-Theodora Melissari, Sandra Währisch, Harald Schwalbe, Bernhard G Herrmann, Phillip Grote
Nucleic Acids Res. 2023 Jul 7; 51(12): 6227–6237. Published online 2023 May 19. doi: 10.1093/nar/gkad395
PMCID:
PMC10325902
AbstractArticlePDF–1.9M
2.
LncRNA Fendrr: involvement in the protective role of nucleolin against H2O2-induced injury in cardiomyocytes
Cheng Chen, Xiaofang Lin, Yuting Tang, Hui Sun, Leijing Yin, Zhengyang Luo, Shuxin Wang, Pengfei Liang, Bimei Jiang
Redox Rep. 2023; 28(1): 2168626. Published online 2023 Jan 31. doi: 10.1080/13510002.2023.2168626
PMCID:
PMC9891159
AbstractArticlePDF–2.2M
3.
LncRNA-Fendrr protects against the ubiquitination and degradation of NLRC4 protein through HERC2 to regulate the pyroptosis of microglia
Li-Qing Wang, Yue-Ying Zheng, Heng-Jun Zhou, Xiong-Xin Zhang, Pin Wu, Sheng-Mei Zhu
Mol Med. 2021; 27: 39. Published online 2021 Apr 15. doi: 10.1186/s10020-021-00299-y
PMCID:
PMC8048261
AbstractArticlePDF–3.0M
4.
The long non-coding RNA Fendrr links epigenetic control mechanisms to gene regulatory networks in mammalian embryogenesis
Phillip Grote, Bernhard G Herrmann
RNA Biol. 2013 Oct 1; 10(10): 1579–1585. Published online 2013 Aug 22. doi: 10.4161/rna.26165
PMCID:
PMC3866236
AbstractArticlePDF–1.1M
5.
The increase of long noncoding RNA Fendrr in hepatocytes contributes to liver fibrosis by promoting IL-6 production
Zhiqian Kang, Chenqi Wang, Fang Shao, Hao Deng, Yanyan Sun, Zhengrong Ren, Wei Zhang, Zhi Ding, Junfeng Zhang, Yuhui Zang
J Biol Chem. 2024 Jun; 300(6): 107376. Published online 2024 May 16. doi: 10.1016/j.jbc.2024.107376
PMCID:
PMC11190708
AbstractArticlePDF–7.2M
6.
LncRNA FENDRR with m6A RNA methylation regulates hypoxia-induced pulmonary artery endothelial cell pyroptosis by mediating DRP1 DNA methylation
Xiaoying Wang, Qian Li, Siyu He, June Bai, Cui Ma, Lixin Zhang, Xiaoyu Guan, Hao Yuan, Yiying Li, Xiangrui Zhu, Jian Mei, Feng Gao, Daling Zhu
Mol Med. 2022; 28: 126. Published online 2022 Oct 25. doi: 10.1186/s10020-022-00551-z
PMCID:
PMC9594874
AbstractArticlePDF–9.8M
7.
Long non-coding RNA FENDRR regulates IFNγ-induced M1 phenotype in macrophages
Maria Cristina Munteanu, Chaoqun Huang, Yurong Liang, Roshini Sathiaseelan, Xiangming Zeng, Lin Liu
Sci Rep. 2020; 10: 13672. Published online 2020 Aug 13. doi: 10.1038/s41598-020-70633-7
PMCID:
PMC7426844
AbstractArticlePDF–4.1M
8.
A class of circadian long non-coding RNAs mark enhancers modulating long-range circadian gene regulation
Zenghua Fan, Meng Zhao, Parth D. Joshi, Ping Li, Yan Zhang, Weimin Guo, Yichi Xu, Haifang Wang, Zhihu Zhao, Jun Yan
Nucleic Acids Res. 2017 Jun 2; 45(10): 5720–5738. Published online 2017 Mar 8. doi: 10.1093/nar/gkx156
PMCID:
PMC5449593
AbstractArticlePDF–5.2M
9.
FOXF1 Transcription Factor Is Required for Formation of Embryonic Vasculature by Regulating VEGF Signaling in Endothelial Cells
Xiaomeng Ren, Vladimir Ustiyan, Arun Pradhan, Yuqi Cai, Jamie A. Havrilak, Craig S. Bolte, John M. Shannon, Tanya V. Kalin, Vladimir V. Kalinichenko
Circ Res. Author manuscript; available in PMC 2016 Mar 29.
Published in final edited form as: Circ Res. 2014 Sep 26; 115(8): 709–720. Published online 2014 Aug 4. doi: 10.1161/CIRCRESAHA.115.304382
PMCID:
PMC4810682
AbstractArticlePDF–4.7M
10.
Diverse Phenotypes and Specific Transcription Patterns in Twenty Mouse Lines with Ablated LincRNAs
Ka-Man Venus Lai, Guochun Gong, Amanda Atanasio, José Rojas, Joseph Quispe, Julita Posca, Derek White, Mei Huang, Daria Fedorova, Craig Grant, Lawrence Miloscio, Gustavo Droguett, William T. Poueymirou, Wojtek Auerbach, George D. Yancopoulos, David Frendewey, John Rinn, David M. Valenzuela
PLoS One. 2015; 10(4): e0125522. Published online 2015 Apr 24. doi: 10.1371/journal.pone.0125522
PMCID:
PMC4409293
AbstractArticlePDF–20M
11.
Long noncoding RNAs are spatially correlated with transcription factors and regulate lung development
Michael J. Herriges, Daniel T. Swarr, Michael P. Morley, Komal S. Rathi, Tien Peng, Kathleen M. Stewart, Edward E. Morrisey
Genes Dev. 2014 Jun 15; 28(12): 1363–1379. doi: 10.1101/gad.238782.114
PMCID:
PMC4066405
AbstractArticlePDF–2.7M
12.
The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse
Phillip Grote, Lars Wittler, Sandra Währisch, David Hendrix, Arica Beisaw, Karol Macura, Gaby Bläss, Manolis Kellis, Martin Werber, Bernhard G. Herrmann
Dev Cell. Author manuscript; available in PMC 2014 Aug 29.
Published in final edited form as: Dev Cell. 2013 Jan 28; 24(2): 206–214. doi: 10.1016/j.devcel.2012.12.012
PMCID:
PMC4149175
AbstractArticlePDF–820K
13.
Multiple knockout mouse models reveal lincRNAs are required for life and brain development
Martin Sauvageau, Loyal A Goff, Simona Lodato, Boyan Bonev, Abigail F Groff, Chiara Gerhardinger, Diana B Sanchez-Gomez, Ezgi Hacisuleyman, Eric Li, Matthew Spence, Stephen C Liapis, William Mallard, Michael Morse, Mavis R Swerdel, Michael F D’Ecclessis, Jennifer C Moore, Venus Lai, Guochun Gong, George D Yancopoulos, David Frendewey, Manolis Kellis, Ronald P Hart, David M Valenzuela, Paola Arlotta, John L Rinn
eLife. 2013; 2: e01749. Published online 2013 Dec 31. doi: 10.7554/eLife.01749
PMCID:
PMC3874104
AbstractArticlePDF–4.6M
14.
The Vertebrate Genome Annotation browser 10 years on
Jennifer L. Harrow, Charles A. Steward, Adam Frankish, James G. Gilbert, Jose M. Gonzalez, Jane E. Loveland, Jonathan Mudge, Dan Sheppard, Mark Thomas, Stephen Trevanion, Laurens G. Wilming
Nucleic Acids Res. 2014 Jan 1; 42(Database issue): D771–D779. Published online 2013 Dec 6. doi: 10.1093/nar/gkt1241
PMCID:
PMC3964964
AbstractArticlePDF–11M
15.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
16.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M

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