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Items: 1 to 20 of 69

1.
Non-canonical isoforms of the mRNA polyadenylation factor WDR33 regulate STING-mediated immune responses
Lizhi Liu, James L. Manley
Cell Rep. Author manuscript; available in PMC 2024 Apr 16.
Published in final edited form as: Cell Rep. 2024 Mar 26; 43(3): 113886. Published online 2024 Mar 1. doi: 10.1016/j.celrep.2024.113886
PMCID:
PMC11019558
AbstractArticlePDF–2.6M
2.
Reconstitution of CPSF active in polyadenylation: recognition of the polyadenylation signal by WDR33
Lars Schönemann, Uwe Kühn, Georges Martin, Peter Schäfer, Andreas R. Gruber, Walter Keller, Mihaela Zavolan, Elmar Wahle
Genes Dev. 2014 Nov 1; 28(21): 2381–2393. doi: 10.1101/gad.250985.114
PMCID:
PMC4215183
AbstractArticlePDF–1.7M
3.
Molecular architecture of the human pre-mRNA 3′ processing complex
Yongsheng Shi, Dafne Campigli Di Giammartino, Derek Taylor, Ali Sarkeshik, William J. Rice, John R. Yates, III, Joachim Frank, James L. Manley
Mol Cell. Author manuscript; available in PMC 2010 Sep 27.
Published in final edited form as: Mol Cell. 2009 Feb 13; 33(3): 365–376. doi: 10.1016/j.molcel.2008.12.028
PMCID:
PMC2946185
AbstractArticlePDF–1.4M
4.
CPSF30 and Wdr33 directly bind to AAUAAA in mammalian mRNA 3′ processing
Serena L. Chan, Ina Huppertz, Chengguo Yao, Lingjie Weng, James J. Moresco, John R. Yates, III, Jernej Ule, James L. Manley, Yongsheng Shi
Genes Dev. 2014 Nov 1; 28(21): 2370–2380. doi: 10.1101/gad.250993.114
PMCID:
PMC4215182
AbstractArticlePDF–945K
5.
Structural insights into the assembly and polyA signal recognition mechanism of the human CPSF complex
Marcello Clerici, Marco Faini, Ruedi Aebersold, Martin Jinek
eLife. 2017; 6: e33111. Published online 2017 Dec 23. doi: 10.7554/eLife.33111
PMCID:
PMC5760199
AbstractArticlePDF–1.4M
6.
Gene Network Analysis in a Pediatric Cohort Identifies Novel Lung Function Genes
Bruce A. Ong, Jin Li, Joseph M. McDonough, Zhi Wei, Cecilia Kim, Rosetta Chiavacci, Frank Mentch, Jason B. Caboot, Jonathan Spergel, Julian L. Allen, Patrick M. A. Sleiman, Hakon Hakonarson
PLoS One. 2013; 8(9): e72899. Published online 2013 Sep 2. doi: 10.1371/journal.pone.0072899
PMCID:
PMC3759429
AbstractArticlePDF–120K
7.
Mechanistic insights into COVID-19 by global analysis of the SARS-CoV-2 3CLpro substrate degradome
Isabel Pablos, Yoan Machado, Hugo C. Ramos de Jesus, Yasir Mohamud, Reinhild Kappelhoff, Cecilia Lindskog, Marli Vlok, Peter A. Bell, Georgina S. Butler, Peter M. Grin, Quynh T. Cao, Jenny P. Nguyen, Nestor Solis, Srinivas Abbina, Wioletta Rut, John C. Vederas, Laszlo Szekely, Attila Szakos, Marcin Drag, Jayachandran N. Kizhakkedathu, Karen Mossman, Jeremy A. Hirota, Eric Jan, Honglin Luo, Arinjay Banerjee, Christopher M. Overall
Cell Rep. 2021 Oct 26; 37(4): 109892. Published online 2021 Oct 9. doi: 10.1016/j.celrep.2021.109892
PMCID:
PMC8501228
AbstractArticlePDF–9.7M
8.
Genetics of coronary artery calcification among African Americans, a meta-analysis
Mary K Wojczynski, Mingyao Li, Lawrence F Bielak, Kathleen F Kerr, Alex P Reiner, Nathan D Wong, Lisa R Yanek, Liming Qu, Charles C White, Leslie A Lange, Jane F Ferguson, Jing He, Taylor Young, Thomas H Mosley, Jennifer A Smith, Brian G Kral, Xiuqing Guo, Quenna Wong, Santhi K Ganesh, Susan R Heckbert, Michael E Griswold, Daniel H O’Leary, Matthew Budoff, J Jeffrey Carr, Herman A Taylor,, Jr., David A Bluemke, Serkalem Demissie, Shih-Jen Hwang, Dina N Paltoo, Joseph F Polak, Bruce M Psaty, Diane M Becker, Michael A Province, Wendy S Post, Christopher J O’Donnell, James G Wilson, Tamara B Harris, Maryam Kavousi, L Adrienne Cupples, Jerome I Rotter, Myriam Fornage, Lewis C Becker, Patricia A Peyser, Ingrid B Borecki, Muredach P Reilly
BMC Med Genet. 2013; 14: 75. Published online 2013 Jul 19. doi: 10.1186/1471-2350-14-75
PMCID:
PMC3733595
AbstractArticlePDF–884K
9.
A Systematic Screen for CDK4/6 Substrates Links FOXM1 Phosphorylation to Senescence Suppression in Cancer Cells
Lars Anders, Nan Ke, Per Hydbring, Yoon J. Choi, Hans R. Widlund, Joel M. Chick, Huili Zhai, Marc Vidal, Stephen P. Gygi, Pascal Braun, Piotr Sicinski
Cancer Cell. Author manuscript; available in PMC 2012 Nov 15.
Published in final edited form as: Cancer Cell. 2011 Nov 15; 20(5): 620–634. doi: 10.1016/j.ccr.2011.10.001
PMCID:
PMC3237683
AbstractArticlePDF–3.3M
10.
DBIRD integrates alternative mRNA splicing with RNA polymerase II transcript elongation
Pierre Close, Philip East, A. Barbara Dirac-Svejstrup, Holger Hartmann, Mark Heron, Sarah Maslen, Alain Chariot, Johannes Söding, Mark Skehel, Jesper Q. Svejstrup
Nature. Author manuscript; available in PMC 2012 Oct 19.
Published in final edited form as: Nature. 2012 Mar 25; 484(7394): 386–389. Published online 2012 Mar 25. doi: 10.1038/nature10925
PMCID:
PMC3378035
AbstractArticlePDF–1.2M
11.
The MYO6 interactome reveals adaptor complexes coordinating early endosome and cytoskeletal dynamics
Thomas O'Loughlin, Thomas A Masters, Folma Buss
EMBO Rep. 2018 Apr; 19(4): e44884. Published online 2018 Feb 21. doi: 10.15252/embr.201744884
PMCID:
PMC5891429
AbstractArticlePDF–9.1M
12.
Quantitative proteomics reveals that long non-coding RNA MALAT1 interacts with DBC1 to regulate p53 acetylation
Ruibing Chen, Yun Liu, Hao Zhuang, Baicai Yang, Kaiwen Hei, Mingming Xiao, Chunyu Hou, Huajun Gao, Xinran Zhang, Chenxi Jia, Lingjun Li, Yongmei Li, Ning Zhang
Nucleic Acids Res. 2017 Sep 29; 45(17): 9947–9959. Published online 2017 Jul 10. doi: 10.1093/nar/gkx600
Correction in:
Nucleic Acids Res. 2021 Apr 19; 49(7): 4199–4202.
PMCID:
PMC5622371
AbstractArticlePDF–5.6M
13.
KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4
Ashish Kumar, Yuanzhi Lyu, Yuichi Yanagihashi, Chanikarn Chantarasrivong, Vladimir Majerciak, Michelle Salemi, Kang-Hsin Wang, Tomoki Inagaki, Frank Chuang, Ryan R. Davis, Clifford G. Tepper, Kazushi Nakano, Chie Izumiya, Michiko Shimoda, Ken-ichi Nakajima, Alexander Merleev, Zhi-Ming Zheng, Mel Campbell, Yoshihiro Izumiya
Cell Rep. Author manuscript; available in PMC 2022 May 31.
Published in final edited form as: Cell Rep. 2022 May 10; 39(6): 110788. doi: 10.1016/j.celrep.2022.110788
PMCID:
PMC9153692
AbstractArticlePDF–3.0M
14.
The Eyes Absent family members EYA4 and EYA1 promote PLK1 activation and successful mitosis through tyrosine dephosphorylation
Christopher B. Nelson, Samuel Rogers, Kaushik Roychoudhury, Yaw Sing Tan, Caroline J. Atkinson, Alexander P. Sobinoff, Christopher G. Tomlinson, Anton Hsu, Robert Lu, Eloise Dray, Michelle Haber, Jamie I. Fletcher, Anthony J. Cesare, Rashmi S. Hegde, Hilda A. Pickett
Nat Commun. 2024; 15: 1385. Published online 2024 Feb 15. doi: 10.1038/s41467-024-45683-4
PMCID:
PMC10869800
AbstractArticlePDF–9.3M
15.
Human ISG15 conjugation targets both IFN-induced and constitutively expressed proteins functioning in diverse cellular pathways
Chen Zhao, Carilee Denison, Jon M. Huibregtse, Steven Gygi, Robert M. Krug
Proc Natl Acad Sci U S A. 2005 Jul 19; 102(29): 10200–10205. Published online 2005 Jul 11. doi: 10.1073/pnas.0504754102
PMCID:
PMC1177427
AbstractArticlePDF–470K
16.
WW Domains Provide a Platform for the Assembly of Multiprotein Networks
Robert J. Ingham, Karen Colwill, Caley Howard, Sabine Dettwiler, Caesar S. H. Lim, Joanna Yu, Kadija Hersi, Judith Raaijmakers, Gerald Gish, Geraldine Mbamalu, Lorne Taylor, Benny Yeung, Galina Vassilovski, Manish Amin, Fu Chen, Liudmila Matskova, Gösta Winberg, Ingemar Ernberg, Rune Linding, Paul O'Donnell, Andrei Starostine, Walter Keller, Pavel Metalnikov, Chris Stark, Tony Pawson
Mol Cell Biol. 2005 Aug; 25(16): 7092–7106. doi: 10.1128/MCB.25.16.7092-7106.2005
PMCID:
PMC1190255
AbstractArticlePDF–1.1M
17.
An inducible CRISPR/Cas9 screen identifies DTX2 as a transcriptional regulator of human telomerase
Zhifen Zhou, Yujing Li, Huimin Xu, Xiaowei Xie, Zibin He, Song Lin, Ruofei Li, Shouheng Jin, Jun Cui, Hai Hu, Feng Liu, Su Wu, Wenbin Ma, Zhou Songyang
iScience. 2022 Feb 18; 25(2): 103813. Published online 2022 Jan 25. doi: 10.1016/j.isci.2022.103813
PMCID:
PMC8844827
AbstractArticlePDF–6.0M
18.
Regulation of epidermal differentiation through KDF1‐mediated deubiquitination of IKKα
Yuanyuan Li, Liangfeng Tang, Jiping Yue, Xuewen Gou, Anning Lin, Scott D Weatherbee, Xiaoyang Wu
EMBO Rep. 2020 May 6; 21(5): e48566. Published online 2020 Apr 1. doi: 10.15252/embr.201948566
PMCID:
PMC7202209
AbstractArticlePDF–6.2M
19.
Characterizing WW Domain Interactions of Tumor Suppressor WWOX Reveals Its Association with Multiprotein Networks
Mohammad Abu-Odeh, Tomer Bar-Mag, Haiming Huang, TaeHyung Kim, Zaidoun Salah, Suhaib K. Abdeen, Marius Sudol, Dana Reichmann, Sachdev Sidhu, Philip M. Kim, Rami I. Aqeilan
J Biol Chem. 2014 Mar 28; 289(13): 8865–8880. Published online 2014 Feb 18. doi: 10.1074/jbc.M113.506790
PMCID:
PMC3979411
AbstractArticlePDF–3.0M
20.
Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation
Marni S. Crow, Ileana M. Cristea
Mol Cell Proteomics. 2017 Apr; 16(4 Suppl 1): S200–S214. Published online 2017 Jan 11. doi: 10.1074/mcp.M116.064741
PMCID:
PMC5393386
AbstractArticlePDF–2.6M

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