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Items: 1 to 20 of 30

1.
Chromatin modifier developmental pluripotency associated factor 4 (DPPA4) is a candidate gene for alcohol-induced developmental disorders
P. Auvinen, J. Vehviläinen, H. Marjonen, V. Modhukur, J. Sokka, E. Wallén, K. Rämö, L. Ahola, A. Salumets, T. Otonkoski, H. Skottman, M. Ollikainen, R. Trokovic, H. Kahila, N. Kaminen-Ahola
BMC Med. 2022; 20: 495. Published online 2022 Dec 30. doi: 10.1186/s12916-022-02699-1
PMCID:
PMC9801659
ArticlePDF–4.2M
2.
High developmental pluripotency-associated 4 expression promotes cell proliferation and glycolysis, and predicts poor prognosis in non-small-cell lung cancer
Longfei Li, Yufeng Wang, Qiang Wang, Jingming Qu, Xiangju Wei, Jilei Xu, Yuanjin Wang, Feng Suo, Yangjie Zhang
Mol Med Rep. 2019 Jul; 20(1): 445–454. Published online 2019 May 22. doi: 10.3892/mmr.2019.10272
PMCID:
PMC6580026
ArticlePDF–960K
3.
Mesenchymal stem cells derived from human induced pluripotent stem cells retain adequate osteogenicity and chondrogenicity but less adipogenicity
Ran Kang, Yan Zhou, Shuang Tan, Guangqian Zhou, Lars Aagaard, Lin Xie, Cody Bünger, Lars Bolund, Yonglun Luo
Stem Cell Res Ther. 2015; 6(1): 144. Published online 2015 Aug 18. doi: 10.1186/s13287-015-0137-7
PMCID:
PMC4539932
ArticlePDF–2.2M
4.
Developmental pluripotency-associated 4: a novel predictor for prognosis and a potential therapeutic target for colon cancer
Meng Zhang, Feifei Cui, Su Lu, Huijun Lu, Yingming Xue, Jingtao Wang, Jian Chen, Senlin Zhao, Shaofei Ma, Yu Zhang, Yang Yu, Zhihai Peng, Huamei Tang
J Exp Clin Cancer Res. 2015; 34(1): 60. Published online 2015 Jun 11. doi: 10.1186/s13046-015-0176-z
PMCID:
PMC4466839
ArticlePDF–3.8M
5.
The expressions of stem cell markers: Oct4, Nanog, Sox2, nucleostemin, Bmi, Zfx, Tcl1, Tbx3, Dppa4, and Esrrb in bladder, colon, and prostate cancer, and certain cancer cell lines
Sabrieh Amini, Fardin Fathi, Jafar Mobalegi, Heshmatollah Sofimajidpour, Tayyeb Ghadimi
Anat Cell Biol. 2014 Mar; 47(1): 1–11. Published online 2014 Mar 13. doi: 10.5115/acb.2014.47.1.1
PMCID:
PMC3968261
ArticlePDF–2.8M
6.
Functional Genomics of 5- to 8-Cell Stage Human Embryos by Blastomere Single-Cell cDNA Analysis
Amparo Galán, David Montaner, M. Eugenia Póo, Diana Valbuena, Verónica Ruiz, Cristóbal Aguilar, Joaquín Dopazo, Carlos Simón
PLoS One. 2010; 5(10): e13615. Published online 2010 Oct 26. doi: 10.1371/journal.pone.0013615
PMCID:
PMC2964308
ArticlePDF–3.1M
7.
Gene expression profiling differentiates germ cell tumors from other cancers and defines subtype-specific signatures
Dejan Juric, Sanja Sale, Robert A. Hromas, Ron Yu, Yan Wang, George E. Duran, Robert Tibshirani, Lawrence H. Einhorn, Branimir I. Sikic
Proc Natl Acad Sci U S A. 2005 Dec 6; 102(49): 17763–17768. Published online 2005 Nov 23. doi: 10.1073/pnas.0509082102
PMCID:
PMC1308932
ArticlePDF–1.0M
8.
Genomic functions of developmental pluripotency associated factor 4 (Dppa4) in pluripotent stem cells and cancer
Rachel Herndon Klein, Po-Yuan Tung, Priyanka Somanath, Hans Joerg Fehling, Paul S. Knoepfler
Stem Cell Res. Author manuscript; available in PMC 2018 Sep 12.
Published in final edited form as: Stem Cell Res. 2018 Aug; 31: 83–94. Published online 2018 Jul 19. doi: 10.1016/j.scr.2018.07.009
PMCID:
PMC6133722
ArticlePDF–1.8M
9.
ERBB3-Binding Protein (EBP1) is a novel DPPA4 cofactor in human pluripotent cells
Priyanka Somanath, Kelly M. Bush, Paul S. Knoepfler
Stem Cells. Author manuscript; available in PMC 2019 May 1.
Published in final edited form as: Stem Cells. 2018 May; 36(5): 671–682. Published online 2018 Jan 29. doi: 10.1002/stem.2776
PMCID:
PMC5918234
ArticlePDF–549K
10.
Identification of DPPA4 and DPPA2 as a novel family of pluripotency-related oncogenes
Po-Yuan Tung, Natalia Varlakhanova, Paul S. Knoepfler
Stem Cells. Author manuscript; available in PMC 2014 Nov 1.
Published in final edited form as: Stem Cells. 2013 Nov; 31(11): 2330–2342. doi: 10.1002/stem.1526
PMCID:
PMC3922068
ArticlePDF–3.7M
11.
Interrogation of the platelet-derived growth factor receptor alpha locus and corneal astigmatism in Australians of Northern European ancestry: Results of a genome-wide association study
Seyhan Yazar, Aniket Mishra, Wei Ang, Lisa S. Kearns, Jenny A. Mountain, Craig Pennell, Grant W. Montgomery, Terri L. Young, Christopher J. Hammond, Stuart Macgregor, David A. Mackey, Alex W. Hewitt
Mol Vis. 2013; 19: 1238–1246. Published online 2013 Jun 6.
PMCID:
PMC3675057
ArticlePDF–1.7M
12.
Hypertrophy‐Associated Polymorphisms Ascertained in a Founder Cohort Applied to Heart Failure Risk and Mortality
Afshin Parsa, Yen‐Pei C. Chang, Reagan J. Kelly, Mary C. Corretti, Kathleen A. Ryan, Shawn W. Robinson, Stephen S. Gottlieb, Sharon L.R. Kardia, Alan R. Shuldiner, Stephen B. Liggett
Clin Transl Sci. 2011 Feb; 4(1): 17–23. Published online 2011 Feb 23. doi: 10.1111/j.1752-8062.2010.00251.x
PMCID:
PMC4373555
ArticlePDF–971K
13.
Development and application of a DNA microarray-based yeast two-hybrid system
Bernhard Suter, Jean-Fred Fontaine, Reha Yildirimman, Tamás Raskó, Martin H. Schaefer, Axel Rasche, Pablo Porras, Blanca M. Vázquez-Álvarez, Jenny Russ, Kirstin Rau, Raphaele Foulle, Martina Zenkner, Kathrin Saar, Ralf Herwig, Miguel A. Andrade-Navarro, Erich E. Wanker
Nucleic Acids Res. 2013 Feb; 41(3): 1496–1507. Published online 2012 Dec 26. doi: 10.1093/nar/gks1329
PMCID:
PMC3561971
ArticlePDF–8.6M
14.
Insights into the ubiquitin-proteasome system of human embryonic stem cells
Isabel Saez, Seda Koyuncu, Ricardo Gutierrez-Garcia, Christoph Dieterich, David Vilchez
Sci Rep. 2018; 8: 4092. Published online 2018 Mar 6. doi: 10.1038/s41598-018-22384-9
PMCID:
PMC5840266
ArticlePDF–2.9M
15.
The variant Polycomb Repressor Complex 1 component PCGF1 interacts with a pluripotency sub-network that includes DPPA4, a regulator of embryogenesis
Giorgio Oliviero, Nayla Munawar, Ariane Watson, Gundula Streubel, Gwendolyn Manning, Vivian Bardwell, Adrian P. Bracken, Gerard Cagney
Sci Rep. 2015; 5: 18388. Published online 2015 Dec 21. doi: 10.1038/srep18388
PMCID:
PMC4685312
ArticlePDF–1.5M
16.
Transcription Factor Protein Interactomes Reveal Genetic Determinants in Heart Disease
Barbara Gonzalez-Teran, Maureen Pittman, Franco Felix, Reuben Thomas, Desmond Richmond-Buccola, Ruth Hüttenhain, Krishna Choudhary, Elisabetta Moroni, Mauro W. Costa, Yu Huang, Arun Padmanabhan, Michael Alexanian, Clara Youngna Lee, Bonnie E. J. Maven, Kaitlen Samse-Knapp, Sarah U. Morton, Michael McGregor, Casey A. Gifford, J. G. Seidman, Christine E. Seidman, Bruce D. Gelb, Giorgio Colombo, Bruce R. Conklin, Brian L. Black, Benoit G. Bruneau, Nevan J. Krogan, Katherine S. Pollard, Deepak Srivastava
Cell. Author manuscript; available in PMC 2023 Mar 3.
Published in final edited form as: Cell. 2022 Mar 3; 185(5): 794–814.e30. Published online 2022 Feb 18. doi: 10.1016/j.cell.2022.01.021
PMCID:
PMC8923057
ArticlePDF–2.5M
17.
Proteome‐scale mapping of binding sites in the unstructured regions of the human proteome
Caroline Benz, Muhammad Ali, Izabella Krystkowiak, Leandro Simonetti, Ahmed Sayadi, Filip Mihalic, Johanna Kliche, Eva Andersson, Per Jemth, Norman E Davey, Ylva Ivarsson
Mol Syst Biol. 2022 Jan; 18(1): e10584. Published online 2022 Jan 19. doi: 10.15252/msb.202110584
PMCID:
PMC8769072
ArticlePDF–2.9M
18.
Widespread expansion of protein interaction capabilities by alternative splicing
Xinping Yang, Jasmin Coulombe-Huntington, Shuli Kang, Gloria M. Sheynkman, Tong Hao, Aaron Richardson, Song Sun, Fan Yang, Yun A. Shen, Ryan R. Murray, Kerstin Spirohn, Bridget E. Begg, Miquel Duran-Frigola, Andrew MacWilliams, Samuel J. Pevzner, Quan Zhong, Shelly A. Wanamaker, Stanley Tam, Lila Ghamsari, Nidhi Sahni, Song Yi, Maria D. Rodriguez, Dawit Balcha, Guihong Tan, Michael Costanzo, Brenda Andrews, Charles Boone, Xianghong J. Zhou, Kourosh Salehi-Ashtiani, Benoit Charloteaux, Alyce A. Chen, Michael A. Calderwood, Patrick Aloy, Frederick P. Roth, David E. Hill, Lilia M. Iakoucheva, Yu Xia, Marc Vidal
Cell. Author manuscript; available in PMC 2017 Feb 11.
Published in final edited form as: Cell. 2016 Feb 11; 164(4): 805–817. doi: 10.1016/j.cell.2016.01.029
PMCID:
PMC4882190
ArticlePDF–1.9M
19.
An inter‐species protein–protein interaction network across vast evolutionary distance
Quan Zhong, Samuel J Pevzner, Tong Hao, Yang Wang, Roberto Mosca, Jörg Menche, Mikko Taipale, Murat Taşan, Changyu Fan, Xinping Yang, Patrick Haley, Ryan R Murray, Flora Mer, Fana Gebreab, Stanley Tam, Andrew MacWilliams, Amélie Dricot, Patrick Reichert, Balaji Santhanam, Lila Ghamsari, Michael A Calderwood, Thomas Rolland, Benoit Charloteaux, Susan Lindquist, Albert‐László Barabási, David E Hill, Patrick Aloy, Michael E Cusick, Yu Xia, Frederick P Roth, Marc Vidal
Mol Syst Biol. 2016 Apr; 12(4): 865. Published online 2016 Apr 23. doi: 10.15252/msb.20156484
PMCID:
PMC4848758
ArticlePDF–2.1M
20.
Leveraging the power of next-generation sequencing to generate interactome datasets
Haiyuan Yu, Leah Tardivo, Stanley Tam, Evan Weiner, Fana Gebreab, Changyu Fan, Nenad Svrzikapa, Tomoko Hirozane-Kishikawa, Edward Rietman, Xinping Yang, Julie Sahalie, Kourosh Salehi-Ashtiani, Tong Hao, Michael E. Cusick, David E. Hill, Frederick P. Roth, Pascal Braun, Marc Vidal
Nat Methods. Author manuscript; available in PMC 2011 Dec 1.
Published in final edited form as: Nat Methods. 2011 Jun; 8(6): 478–480. Published online 2011 Apr 24. doi: 10.1038/nmeth.1597
PMCID:
PMC3188388
ArticlePDF–932K

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