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Select item 64510961.

Molecular basis for transfer RNA recognition by the double-stranded RNA-binding domain of human dihydrouridine synthase 2

Charles Bou-Nader, Pierre Barraud, Ludovic Pecqueur, Javier Pérez, Christophe Velours, William Shepard, Marc Fontecave, Carine Tisné, Djemel Hamdane

Nucleic Acids Res. 2019 Apr 8; 47(6): 3117–3126. Published online 2019 Jan 3. doi: 10.1093/nar/gky1302

PMCID:: PMC6451096

Abstract Article PDF–2.0M

Select item 44986062.

From bacterial to human dihydrouridine synthase: automated structure determination

Fiona Whelan, Huw T. Jenkins, Samuel C. Griffiths, Robert T. Byrne, Eleanor J. Dodson, Alfred A. Antson

Acta Crystallogr D Biol Crystallogr. 2015 Jul 1; 71(Pt 7): 1564–1571. Published online 2015 Jun 30. doi: 10.1107/S1399004715009220

PMCID:: PMC4498606

Abstract Article PDF–1.2M

Select item 33105453.

Crystallization and preliminary X-ray crystallographic analysis of the catalytic domain of human dihydrouridine synthase

Sam Griffiths, Robert T. Byrne, Alfred A. Antson, Fiona Whelan

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Mar 1; 68(Pt 3): 333–336. Published online 2012 Feb 22. doi: 10.1107/S1744309112003831

PMCID:: PMC3310545

Abstract Article PDF–341K

Select item 26777254.

Characterization of gene expression regulated by American ginseng and ginsenoside Rg3 in human colorectal cancer cells

XIAOJI LUO, CHONG-ZHI WANG, JIN CHEN, WEN-XIN SONG, JINYONG LUO, NI TANG, BAI-CHENG HE, QUAN KANG, YITAO WANG, WEI DU, TONG-CHUAN HE, CHUN-SU YUAN

Int J Oncol. Author manuscript; available in PMC 2009 May 6.

Published in final edited form as: Int J Oncol. 2008 May; 32(5): 975–983.

PMCID:: PMC2677725

Abstract Article PDF–783K

Select item 46270975.

An extended dsRBD is required for post-transcriptional modification in human tRNAs

Charles Bou-Nader, Ludovic Pecqueur, Damien Bregeon, Amina Kamah, Vincent Guérineau, Béatrice Golinelli-Pimpaneau, Beatriz G. Guimarães, Marc Fontecave, Djemel Hamdane

Nucleic Acids Res. 2015 Oct 30; 43(19): 9446–9456. Published online 2015 Oct 1. doi: 10.1093/nar/gkv989

PMCID:: PMC4627097

Abstract Article PDF–504K

Select item 22419146.

Interaction of human tRNA-dihydrouridine synthase-2 with interferon-induced protein kinase PKR

Megan Mittelstadt, Andrea Frump, TuAnh Khuu, Vennece Fowlkes, Indhira Handy, Chandrashekhar V. Patel, Rekha C. Patel

Nucleic Acids Res. 2008 Feb; 36(3): 998–1008. Published online 2007 Dec 20. doi: 10.1093/nar/gkm1129

PMCID:: PMC2241914

Abstract Article PDF–476K

Select item 36747567.

Molecular evolution of dihydrouridine synthases

Joanna M Kasprzak, Anna Czerwoniec, Janusz M Bujnicki

BMC Bioinformatics. 2012; 13: 153. Published online 2012 Jun 28. doi: 10.1186/1471-2105-13-153

PMCID:: PMC3674756

Abstract Article PDF–2.6M

Select item 87922978.

Transcription-wide mapping of dihydrouridine reveals that mRNA dihydrouridylation is required for meiotic chromosome segregation

Olivier Finet, Carlo Yague-Sanz, Lara Katharina Krüger, Phong Tran, Valérie Migeot, Max Louski, Alicia Nevers, Mathieu Rougemaille, Jingjing Sun, Felix G.M. Ernst, Ludivine Wacheul, Maxime Wery, Antonin Morillon, Peter Dedon, Denis L.J. Lafontaine, Damien Hermand

Mol Cell. Author manuscript; available in PMC 2023 Jan 20.

Published in final edited form as: Mol Cell. 2022 Jan 20; 82(2): 404–419.e9. Published online 2021 Nov 18. doi: 10.1016/j.molcel.2021.11.003

PMCID:: PMC8792297

Abstract Article PDF–3.1M

Select item 76060089.

BCAR1 promotes proliferation and cell growth in lung adenocarcinoma via upregulation of POLR2A

Chun‐guo Mao, Sha‐sha Jiang, Cheng Shen, Tan Long, Hua Jin, Qun‐You Tan, Bo Deng

Thorac Cancer. 2020 Nov; 11(11): 3326–3336. Published online 2020 Oct 1. doi: 10.1111/1759-7714.13676

PMCID:: PMC7606008

Abstract Article PDF–2.5M

Select item 804593210.

A novel p53 regulator, C16ORF72/TAPR1, buffers against telomerase inhibition

Yahya Benslimane, María Sánchez‐Osuna, Jasmin Coulombe‐Huntington, Thierry Bertomeu, Danielle Henry, Caroline Huard, Éric Bonneil, Pierre Thibault, Mike Tyers, Lea Harrington

Aging Cell. 2021 Apr; 20(4): e13331. Published online 2021 Mar 4. doi: 10.1111/acel.13331

PMCID:: PMC8045932

Abstract Article PDF–1.9M

Select item 294347611.

Genetic Variants in Nuclear-Encoded Mitochondrial Genes Influence AIDS Progression

Sher L. Hendrickson, James A. Lautenberger, Leslie Wei Chinn, Michael Malasky, Efe Sezgin, Lawrence A. Kingsley, James J. Goedert, Gregory D. Kirk, Edward D. Gomperts, Susan P. Buchbinder, Jennifer L. Troyer, Stephen J. O'Brien

PLoS One. 2010; 5(9): e12862. Published online 2010 Sep 21. doi: 10.1371/journal.pone.0012862

PMCID:: PMC2943476

Abstract Article PDF–461K

Select item 977255812.

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation

Jingsheng Yuan, Tao Lv, Jian Yang, Zhenru Wu, Lvnan Yan, Jiayin Yang, Yujun Shi, Li Jiang

Cell Mol Gastroenterol Hepatol. 2023; 15(2): 307–325. Published online 2022 Oct 14. doi: 10.1016/j.jcmgh.2022.10.005

PMCID:: PMC9772558

Abstract Article PDF–8.2M

Select item 464794113.

hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes

Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal

Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012

PMCID:: PMC4647941

Abstract Article

Select item 1056587614.

Pulse-SILAC and Interactomics Reveal Distinct DDB1-CUL4–Associated Factors, Cellular Functions, and Protein Substrates

Jennifer Raisch, Marie-Line Dubois, Marika Groleau, Dominique Lévesque, Thomas Burger, Carla-Marie Jurkovic, Romain Brailly, Gwendoline Marbach, Alyson McKenna, Catherine Barrette, Pierre-Étienne Jacques, François-Michel Boisvert

Mol Cell Proteomics. 2023 Oct; 22(10): 100644. Published online 2023 Sep 7. doi: 10.1016/j.mcpro.2023.100644

PMCID:: PMC10565876

Abstract Article PDF–3.7M

Select item 836418115.

Protein interaction landscapes revealed by advanced in vivo cross-linking–mass spectrometry

Andrew Wheat, Clinton Yu, Xiaorong Wang, Anthony M. Burke, Ilan E. Chemmama, Robyn M. Kaake, Peter Baker, Scott D. Rychnovsky, Jing Yang, Lan Huang

Proc Natl Acad Sci U S A. 2021 Aug 10; 118(32): e2023360118. Published online 2021 Aug 4. doi: 10.1073/pnas.2023360118

PMCID:: PMC8364181

Abstract Article PDF–3.0M

Select item 326170816.

Toward an understanding of the protein interaction network of the human liver

Jian Wang, Keke Huo, Lixin Ma, Liujun Tang, Dong Li, Xiaobi Huang, Yanzhi Yuan, Chunhua Li, Wei Wang, Wei Guan, Hui Chen, Chaozhi Jin, Junchen Wei, Wanqiao Zhang, Yongsheng Yang, Qiongming Liu, Ying Zhou, Cuili Zhang, Zhihao Wu, Wangxiang Xu, Ying Zhang, Tao Liu, Donghui Yu, Yaping Zhang, Liang Chen, Dewu Zhu, Xing Zhong, Lixin Kang, Xiang Gan, Xiaolan Yu, Qi Ma, Jing Yan, Li Zhou, Zhongyang Liu, Yunping Zhu, Tao Zhou, Fuchu He, Xiaoming Yang

Mol Syst Biol. 2011; 7: 536. Published online 2011 Oct 11. doi: 10.1038/msb.2011.67

Correction in:: Mol Syst Biol. 2017 Dec; 13(12): 965.

PMCID:: PMC3261708

Abstract Article PDF–2.0M

Select item 927928517.

Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery

Pierre C. Havugimana, Raghuveera Kumar Goel, Sadhna Phanse, Ahmed Youssef, Dzmitry Padhorny, Sergei Kotelnikov, Dima Kozakov, Andrew Emili

Nat Commun. 2022; 13: 4043. Published online 2022 Jul 13. doi: 10.1038/s41467-022-31809-z

PMCID:: PMC9279285

Abstract Article PDF–2.5M

Select item 1023742218.

TRIM67 drives tumorigenesis in oligodendrogliomas through Rho GTPase-dependent membrane blebbing

Engin Demirdizen, Ruslan Al-Ali, Ashwin Narayanan, Xueyuan Sun, Julianna Patricia Varga, Bianca Steffl, Manuela Brom, Damir Krunic, Claudia Schmidt, Gabriele Schmidt, Felix Bestvater, Julian Taranda, Şevin Turcan

Neuro Oncol. 2023 Jun; 25(6): 1031–1043. Published online 2022 Nov 22. doi: 10.1093/neuonc/noac233

PMCID:: PMC10237422

Abstract Article PDF–23M

Select item 911973619.

OpenCell: proteome-scale endogenous tagging enables the cartography of human cellular organization

Nathan H. Cho, Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan, Hirofumi Kobayashi, Laura Savy, Jason Y. Li, Hera Canaj, James Y.S. Kim, Edna M. Stewart, Christian Gnann, Frank McCarthy, Joana P. Cabrera, Rachel M. Brunetti, Bryant B. Chhun, Greg Dingle, Marco Y. Hein, Bo Huang, Shalin B. Mehta, Jonathan S. Weissman, Rafael Gómez-Sjöberg, Daniel N. Itzhak, Loic A. Royer, Matthias Mann, Manuel D. Leonetti

Science. Author manuscript; available in PMC 2022 Sep 11.

Published in final edited form as: Science. 2022 Mar 11; 375(6585): eabi6983. Published online 2022 Mar 11. doi: 10.1126/science.abi6983

PMCID:: PMC9119736

Abstract Article PDF–3.3M

Select item 553161120.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

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PMC Links for Gene (Select 54920) (24)
PMC
346333[uid] (1)
Taxonomy
FXYD domain-containing ion transport regulator 3 isoform 2 precursor [Homo sapie...
FXYD domain-containing ion transport regulator 3 isoform 2 precursor [Homo sapiens]
gi|209862819|ref|NP_001129484.1|

Protein
cytochrome b (mitochondrion) [Myotis sp. 3 W Ecuador]
cytochrome b (mitochondrion) [Myotis sp. 3 W Ecuador]
gi|408368970|gb|AFU61459.1|

Protein

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