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Items: 1 to 20 of 31

1.
Molecular insights into the interaction of PYM with the Mago–Y14 core of the exon junction complex
Fulvia Bono, Judith Ebert, Leonie Unterholzner, Thomas Güttler, Elisa Izaurralde, Elena Conti
EMBO Rep. 2004 Mar; 5(3): 304–310. Published online 2004 Feb 13. doi: 10.1038/sj.embor.7400091
PMCID:
PMC1299003
AbstractArticlePDF–310K
2.
The EJC disassembly factor PYM is an intrinsically disordered protein and forms a fuzzy complex with RNA
Deepshikha Verma, Veena Hegde, John Kirkpatrick, Teresa Carlomagno
Front Mol Biosci. 2023; 10: 1148653. Published online 2023 Mar 30. doi: 10.3389/fmolb.2023.1148653
PMCID:
PMC10098021
AbstractArticlePDF–2.8M
3.
The Drosophila cystoblast differentiation factor, benign gonial cell neoplasm, is related to DExH-box proteins and interacts genetically with bag-of-marbles.
B Ohlstein, C A Lavoie, O Vef, E Gateff, D M McKearin
Genetics. 2000 Aug; 155(4): 1809–1819. doi: 10.1093/genetics/155.4.1809
PMCID:
PMC1461197
SummaryPDF–703K
4.
RanBP2/Nup358 Provides a Major Binding Site for NXF1-p15 Dimers at the Nuclear Pore Complex and Functions in Nuclear mRNA Export
Daniel Forler, Gwénaël Rabut, Francesca D. Ciccarelli, Andrea Herold, Thomas Köcher, Ricarda Niggeweg, Peer Bork, Jan Ellenberg, Elisa Izaurralde
Mol Cell Biol. 2004 Feb; 24(3): 1155–1167. doi: 10.1128/MCB.24.3.1155-1167.2004
PMCID:
PMC321439
AbstractArticlePDF–1.2M
5.
The Y Chromosome Modulates Splicing and Sex-Biased Intron Retention Rates in Drosophila
Meng Wang, Alan T. Branco, Bernardo Lemos
Genetics. 2018 Mar; 208(3): 1057–1067. Published online 2017 Dec 20. doi: 10.1534/genetics.117.300637
PMCID:
PMC5844322
AbstractArticlePDF–1.3M
6.
The EJC Binding and Dissociating Activity of PYM Is Regulated in Drosophila
Sanjay Ghosh, Ales Obrdlik, Virginie Marchand, Anne Ephrussi
PLoS Genet. 2014 Jun; 10(6): e1004455. Published online 2014 Jun 26. doi: 10.1371/journal.pgen.1004455
Correction in:
PLoS Genet. 2015 Apr; 11(4): e1005157.
PMCID:
PMC4072592
AbstractArticlePDF–7.8M
7.
The exon junction complex is required for definition and excision of neighboring introns in Drosophila
Rippei Hayashi, Dominik Handler, David Ish-Horowicz, Julius Brennecke
Genes Dev. 2014 Aug 15; 28(16): 1772–1785. doi: 10.1101/gad.245738.114
PMCID:
PMC4197968
AbstractArticlePDF–4.2M
8.
Subcellular spatial transcriptomics identifies three mechanistically different classes of localizing RNAs
Lucia Cassella, Anne Ephrussi
Nat Commun. 2022; 13: 6355. Published online 2022 Oct 26. doi: 10.1038/s41467-022-34004-2
PMCID:
PMC9606379
AbstractArticlePDF–5.2M
9.
Functional genomic screen identifies novel mediators of collagen uptake
Ting-Hein Lee, William McKleroy, Amin Khalifeh-Soltani, Stephen Sakuma, Stanislav Lazarev, Kirsi Riento, Stephen L. Nishimura, Ben J. Nichols, Kamran Atabai
Mol Biol Cell. 2014 Mar 1; 25(5): 583–593. doi: 10.1091/mbc.E13-07-0382
PMCID:
PMC3937085
AbstractArticlePDF–2.3M
10.
Exon junction complex subunits are required to splice Drosophila MAP kinase, a large heterochromatic gene
Jean-Yves Roignant, Jessica E. Treisman
Cell. Author manuscript; available in PMC 2011 Oct 15.
Published in final edited form as: Cell. 2010 Oct 15; 143(2): 238–250. doi: 10.1016/j.cell.2010.09.036
PMCID:
PMC2955985
AbstractArticlePDF–7.0M
11.
High throughput in vivo functional validation of candidate congenital heart disease genes in Drosophila
Jun-yi Zhu, Yulong Fu, Margaret Nettleton, Adam Richman, Zhe Han
eLife. 2017; 6: e22617. Published online 2017 Jan 20. doi: 10.7554/eLife.22617
PMCID:
PMC5300701
AbstractArticlePDF–4.1M
12.
Systems Genetics of Complex Traits in Drosophila melanogaster
Julien F. Ayroles, Mary Anna Carbone, Eric A. Stone, Katherine W. Jordan, Richard F. Lyman, Michael M. Magwire, Stephanie M. Rollmann, Laura H. Duncan, Faye Lawrence, Robert R. H. Anholt, Trudy F. C. Mackay
Nat Genet. Author manuscript; available in PMC 2009 Sep 25.
Published in final edited form as: Nat Genet. 2009 Mar; 41(3): 299–307. Published online 2009 Feb 22. doi: 10.1038/ng.332
PMCID:
PMC2752214
AbstractArticlePDF–3.1M
13.
Hedgehog Signaling Strength Is Orchestrated by the mir-310 Cluster of MicroRNAs in Response to Diet
Ibrahim Ömer Çiçek, Samir Karaca, Marko Brankatschk, Suzanne Eaton, Henning Urlaub, Halyna R. Shcherbata
Genetics. 2016 Mar; 202(3): 1167–1183. Published online 2016 Jan 22. doi: 10.1534/genetics.115.185371
PMCID:
PMC4788116
AbstractArticlePDF–4.7M
14.
A Protein Complex Network of Drosophila melanogaster
K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas
Cell. Author manuscript; available in PMC 2012 Oct 28.
Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047
PMCID:
PMC3319048
AbstractArticlePDF–3.2M
15.
Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes
Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili
Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062
PMCID:
PMC4738005
AbstractArticlePDF–205K
16.
Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes
Ana López-Varea, Patricia Vega-Cuesta, Ana Ruiz-Gómez, Cristina M Ostalé, Cristina Molnar, Covadonga F Hevia, Mercedes Martín, Maria F Organista, Jesus de Celis, Joaquín Culí, Nuria Esteban, Jose F de Celis
G3 (Bethesda) 2021 Dec; 11(12): jkab349. Published online 2021 Oct 2. doi: 10.1093/g3journal/jkab349
PMCID:
PMC8664486
AbstractArticlePDF–3.1M
17.
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans
Ping Wei, Wen Xue, Yun Zhao, Guang Ning, Jiwu Wang
Genome Res. 2020 Jan; 30(1): 95–106. doi: 10.1101/gr.250811.119
PMCID:
PMC6961578
AbstractArticlePDF–3.6M
18.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
19.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
20.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M

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