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Items: 1 to 20 of 21

1.
Structural Changes in the Hydrophobic Hinge Region Adversely Affect the Activity and Fidelity of the I260Q Mutator DNA Polymerase β
Chelsea L. Gridley, Sneha Rangarajan, Susan Firbank, Shibani Dalal, Joann B. Sweasy, Joachim Jaeger
Biochemistry. Author manuscript; available in PMC 2013 Dec 25.
Published in final edited form as: Biochemistry. 2013 Jun 25; 52(25): 4422–4432. Published online 2013 Jun 12. doi: 10.1021/bi301368f
PMCID:
PMC3733117
AbstractArticlePDF–1.4M
2.
Unfavorable electrostatic and steric interactions in DNA polymerase β E295K mutant interfere with the enzyme’s pathway
Yunlang Li, Chelsea L. Gridley, Joachim Jaeger, Joann B. Sweasy, Tamar Schlick
J Am Chem Soc. Author manuscript; available in PMC 2013 Jun 20.
Published in final edited form as: J Am Chem Soc. 2012 Jun 20; 134(24): 9999–10010. Published online 2012 Jun 11. doi: 10.1021/ja300361r
PMCID:
PMC3383778
AbstractArticlePDF–3.8M
3.
Hinge Residue I174 is Critical for Proper dNTP Selection by DNA Polymerase β
Jen Yamtich, Daniela Starcevic, Julia Lauper, Elenoe Smith, Idina Shi, Sneha Rangarajan, Joachim Jaeger, Joann B. Sweasy
Biochemistry. Author manuscript; available in PMC 2010 Sep 23.
Published in final edited form as: Biochemistry. 2010 Mar 23; 49(11): 2326–2334. doi: 10.1021/bi901735a
PMCID:
PMC2840207
AbstractArticlePDF–1.6M
4.
NMR Assignment of Polymerase ß labeled with 2H, 13C, and 15N in complex with substrate DNA
Geoffrey A. Mueller, Eugene F. DeRose, Thomas W. Kirby, Robert E. London
Biomol NMR Assign. Author manuscript; available in PMC 2009 May 4.
Published in final edited form as: Biomol NMR Assign. 2007; 1(1): 33–35. doi: 10.1007/s12104-007-9007-2
PMCID:
PMC2676717
AbstractArticlePDF–191K
5.
Loop II of DNA Polymerase Beta is Important for Discrimination During Substrate Binding
George C. Lin, Joachim Jaeger, Kristin A. Eckert, Joann B Sweasy
DNA Repair (Amst) Author manuscript; available in PMC 2010 Feb 1.
Published in final edited form as: DNA Repair (Amst). 2009 Feb 1; 8(2): 182–189. Published online 2008 Dec 5. doi: 10.1016/j.dnarep.2008.10.006
PMCID:
PMC2653711
AbstractArticlePDF–1.1M
6.
Regenerating rat liver DNA polymerases: disimilitude or relationship between nuclear and cytoplasmic enzymes?
A M de Recondo, J Abadiedebat
Nucleic Acids Res. 1976 Aug; 3(8): 1823–1837. doi: 10.1093/nar/3.8.1823
PMCID:
PMC343043
SummaryPage BrowsePDF–1.0M
7.
Structure of rat DNA polymerase beta revealed by partial amino acid sequencing and cDNA cloning.
B Z Zmudzka, D SenGupta, A Matsukage, F Cobianchi, P Kumar, S H Wilson
Proc Natl Acad Sci U S A. 1986 Jul; 83(14): 5106–5110. doi: 10.1073/pnas.83.14.5106
PMCID:
PMC323899
SummaryPage BrowsePDF–1.0M
8.
History of DNA polymerase β X-ray crystallography
Amy M. Whitaker, Bret D. Freudenthal
DNA Repair (Amst) Author manuscript; available in PMC 2021 Sep 1.
Published in final edited form as: DNA Repair (Amst). 2020 Sep; 93: 102928. doi: 10.1016/j.dnarep.2020.102928
PMCID:
PMC7586737
AbstractArticlePDF–1.7M
9.
Characterization of the redox transition of the XRCC1 N-terminal domain
Scott A. Gabel, Cassandra E. Smith, Matthew J. Cuneo, Geoffrey A. Mueller, Thomas W. Kirby, Eugene F. DeRose, Juno M. Krahn, Robert E. London
Structure. Author manuscript; available in PMC 2017 Sep 7.
Published in final edited form as: Structure. 2014 Dec 2; 22(12): 1754–1763. Published online 2014 Nov 13. doi: 10.1016/j.str.2014.09.012
PMCID:
PMC5588702
AbstractArticlePDF–2.6M
10.
Mutation of POL B Causes Lupus in Mice
Alireza G. Senejani, Yanfeng Liu, Dawit Kidane, Stephen E. Maher, Caroline J Zeiss, Hong-Jae Park, Michael Kashgarian, Jennifer M. McNiff, Daniel Zelterman, Alfred L. M. Bothwell, Joann B. Sweasy
Cell Rep. Author manuscript; available in PMC 2015 Jan 16.
Published in final edited form as: Cell Rep. 2014 Jan 16; 6(1): 1–8. Published online 2014 Jan 2. doi: 10.1016/j.celrep.2013.12.017
PMCID:
PMC3916967
AbstractArticlePDF–4.3M
11.
Oxidation state of the XRCC1 N-terminal domain regulates DNA polymerase β binding affinity
Matthew J. Cuneo, Robert E. London
Proc Natl Acad Sci U S A. 2010 Apr 13; 107(15): 6805–6810. Published online 2010 Mar 29. doi: 10.1073/pnas.0914077107
PMCID:
PMC2872404
AbstractArticlePDF–487K
12.
Murine DNA polymerase beta gene: mapping of transcription initiation sites and the nucleotide sequence of the putative promoter region.
M Yamaguchi, F Hirose, Y Hayashi, Y Nishimoto, A Matsukage
Mol Cell Biol. 1987 May; 7(5): 2012–2018. doi: 10.1128/mcb.7.5.2012
PMCID:
PMC365312
SummaryPage BrowsePDF–2.0M
13.
Two regions in human DNA polymerase beta mRNA suppress translation in Escherichia coli.
T Date, K Tanihara, S Yamamoto, N Nomura, A Matsukage
Nucleic Acids Res. 1992 Sep 25; 20(18): 4859–4864. doi: 10.1093/nar/20.18.4859
PMCID:
PMC334243
SummaryPage BrowsePDF–1.4M
14.
Interaction of human apurinic endonuclease and DNA polymerase β in the base excision repair pathway
Richard A. O. Bennett, David M. Wilson, III, Donny Wong, Bruce Demple
Proc Natl Acad Sci U S A. 1997 Jul 8; 94(14): 7166–7169. doi: 10.1073/pnas.94.14.7166
PMCID:
PMC23779
AbstractArticlePDF–368K
15.
Effects of base excision repair gene polymorphisms on pancreatic cancer survival
Donghui Li, Yanan Li, Li Jiao, David Z. Chang, Garth Beinart, Robert A. Wolff, Douglas B. Evans, Manal M. Hassan, James L. Abbruzzese
Int J Cancer. Author manuscript; available in PMC 2007 Jun 15.
Published in final edited form as: Int J Cancer. 2007 Apr 15; 120(8): 1748–1754. doi: 10.1002/ijc.22301
PMCID:
PMC1892183
AbstractArticlePDF–300K
16.
p53 Deficiency Rescues Neuronal Apoptosis but Not Differentiation in DNA Polymerase β-Deficient Mice
Noriyuki Sugo, Naoko Niimi, Yasuaki Aratani, Keiko Takiguchi-Hayashi, Hideki Koyama
Mol Cell Biol. 2004 Nov; 24(21): 9470–9477. doi: 10.1128/MCB.24.21.9470-9477.2004
PMCID:
PMC522222
AbstractArticlePDF–686K
17.
Ubiquitin ligase ARF-BP1/Mule modulates base excision repair
Jason L Parsons, Phillip S Tait, David Finch, Irina I Dianova, Mariola J Edelmann, Svetlana V Khoronenkova, Benedikt M Kessler, Ricky A Sharma, W Gillies McKenna, Grigory L Dianov
EMBO J. 2009 Oct 21; 28(20): 3207–3215. Published online 2009 Aug 27. doi: 10.1038/emboj.2009.243
PMCID:
PMC2771081
AbstractArticlePDF–1.0M
18.
Opposing roles of mitochondrial and nuclear PARP1 in the regulation of mitochondrial and nuclear DNA integrity: implications for the regulation of mitochondrial function
Bartosz Szczesny, Attila Brunyanszki, Gabor Olah, Sankar Mitra, Csaba Szabo
Nucleic Acids Res. 2014 Dec 1; 42(21): 13161–13173. Published online 2014 Nov 5. doi: 10.1093/nar/gku1089
PMCID:
PMC4245951
AbstractArticlePDF–624K
19.
Highly variable penetrance of abnormal phenotypes in embryonic lethal knockout mice
Robert Wilson, Stefan H. Geyer, Lukas Reissig, Julia Rose, Dorota Szumska, Emily Hardman, Fabrice Prin, Christina McGuire, Ramiro Ramirez-Solis, Jacqui White, Antonella Galli, Catherine Tudor, Elizabeth Tuck, Cecilia Icoresi Mazzeo, James C. Smith, Elizabeth Robertson, David J. Adams, Timothy Mohun, Wolfgang J. Weninger
Version 2. Wellcome Open Res. 2016; 1: 1. Published online 2017 Feb 27. doi: 10.12688/wellcomeopenres.9899.2
PMCID:
PMC5159622
AbstractArticlePDF–7.4M
20.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K

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