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Select item 71973891.

A Genome-wide ER-Phagy Screen Highlights Key Roles of Mitochondrial Metabolism and ER-Resident UFMylation

Jin Rui Liang, Emily Lingeman, Thao Luong, Saba Ahmed, Matthias Muhar, Truc Nguyen, James Olzmann, Jacob E. Corn

Cell. Author manuscript; available in PMC 2021 Mar 19.

Published in final edited form as: Cell. 2020 Mar 19; 180(6): 1160–1177.e20. Published online 2020 Mar 10. doi: 10.1016/j.cell.2020.02.017

PMCID:: PMC7197389

Abstract Article PDF–3.2M

Select item 87322822.

Genome-wide CRISPR-cas9 knockout screening identifies GRB7 as a driver for MEK inhibitor resistance in KRAS mutant colon cancer

Chune Yu, Dan Luo, Jing Yu, Min Zhang, Xiaobo Zheng, Guangchao Xu, Jiaxin Wang, Huiling Wang, Yufei Xu, Ke Jiang, Jie Xu, Xuelei Ma, Jing Jing, Hubing Shi

Oncogene. 2022; 41(2): 191–203. Published online 2021 Oct 30. doi: 10.1038/s41388-021-02077-w

PMCID:: PMC8732282

Abstract Article PDF–6.3M

Select item 97236193.

The nucleoplasmic phase of pre-40S formation prior to nuclear export

Jingdong Cheng, Benjamin Lau, Matthias Thoms, Michael Ameismeier, Otto Berninghausen, Ed Hurt, Roland Beckmann

Nucleic Acids Res. 2022 Nov 11; 50(20): 11924–11937. Published online 2022 Nov 2. doi: 10.1093/nar/gkac961

PMCID:: PMC9723619

Abstract Article PDF–11M

Select item 86293904.

ATRX proximal protein associations boast roles beyond histone deposition

William A. Scott, Erum Z. Dhanji, Boris J. A. Dyakov, Ema S. Dreseris, Jonathon S. Asa, Laura J. Grange, Mila Mirceta, Christopher E. Pearson, Grant S. Stewart, Anne-Claude Gingras, Eric I. Campos

PLoS Genet. 2021 Nov; 17(11): e1009909. Published online 2021 Nov 15. doi: 10.1371/journal.pgen.1009909

PMCID:: PMC8629390

Abstract Article PDF–4.0M

Select item 1336175.

Functional Proteomic Analysis of Human Nucleolus

Alexander Scherl, Yohann Couté, Catherine Déon, Aleth Callé, Karine Kindbeiter, Jean-Charles Sanchez, Anna Greco, Denis Hochstrasser, Jean-Jacques Diaz

Mol Biol Cell. 2002 Nov; 13(11): 4100–4109. doi: 10.1091/mbc.E02-05-0271

PMCID:: PMC133617

Abstract Article PDF–369K

Select item 56223716.

Quantitative proteomics reveals that long non-coding RNA MALAT1 interacts with DBC1 to regulate p53 acetylation

Ruibing Chen, Yun Liu, Hao Zhuang, Baicai Yang, Kaiwen Hei, Mingming Xiao, Chunyu Hou, Huajun Gao, Xinran Zhang, Chenxi Jia, Lingjun Li, Yongmei Li, Ning Zhang

Nucleic Acids Res. 2017 Sep 29; 45(17): 9947–9959. Published online 2017 Jul 10. doi: 10.1093/nar/gkx600

Correction in:: Nucleic Acids Res. 2021 Apr 19; 49(7): 4199–4202.

PMCID:: PMC5622371

Abstract Article PDF–5.6M

Select item 1875427.

Protein–Protein Interactions Between Large Proteins: Two-Hybrid Screening Using a Functionally Classified Library Composed of Long cDNAs

Manabu Nakayama, Reiko Kikuno, Osamu Ohara

Genome Res. 2002 Nov; 12(11): 1773–1784. doi: 10.1101/gr.406902

PMCID:: PMC187542

Abstract Article PDF–374K

Select item 66996238.

The human regulatory protein Ki-1/57 is a target of SUMOylation and affects PML nuclear bodies formation

Ângela Saito, Edmarcia E. Souza, Fernanda C. Costa, Gabriela V. Meirelles, Kaliandra A. Gonçalves, Marcos T. Santos, Gustavo C. Bressan, Mark E. McComb, Catherine E. Costello, Stephen A. Whelan, Jörg Kobarg

J Proteome Res. Author manuscript; available in PMC 2019 Aug 19.

Published in final edited form as: J Proteome Res. 2017 Sep 1; 16(9): 3147–3157. Published online 2017 Jul 31. doi: 10.1021/acs.jproteome.7b00001

PMCID:: PMC6699623

Abstract Article PDF–1.0M

Select item 91788779.

Identification of different proteins binding to Na, K-ATPase α1 in LPS-induced ARDS cell model by proteomic analysis

Xu-Peng Wen, Guo Long, Yue-Zhong Zhang, He Huang, Tao-Hua Liu, Qi-Quan Wan

Proteome Sci. 2022; 20: 10. Published online 2022 Jun 9. doi: 10.1186/s12953-022-00193-3

PMCID:: PMC9178877

Abstract Article PDF–2.8M

Select item 729557610.

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137

Fengwen Zhang, Paul D Bieniasz

eLife. 2020; 9: e55806. Published online 2020 Jun 15. doi: 10.7554/eLife.55806

PMCID:: PMC7295576

Abstract Article PDF–4.3M

Select item 613843911.

SHLD2/FAM35A co‐operates with REV7 to coordinate DNA double‐strand break repair pathway choice

Steven Findlay, John Heath, Vincent M Luo, Abba Malina, Théo Morin, Yan Coulombe, Billel Djerir, Zhigang Li, Arash Samiei, Estelle Simo‐Cheyou, Martin Karam, Halil Bagci, Dolev Rahat, Damien Grapton, Elise G Lavoie, Christian Dove, Husam Khaled, Hellen Kuasne, Koren K Mann, Kathleen Oros Klein, Celia M Greenwood, Yuval Tabach, Morag Park, Jean‐Francois Côté, Jean‐Yves Masson, Alexandre Maréchal, Alexandre Orthwein

EMBO J. 2018 Sep 14; 37(18): e100158. Published online 2018 Aug 28. doi: 10.15252/embj.2018100158

PMCID:: PMC6138439

Abstract Article PDF–1.1M

Select item 340874412.

Multiple myeloma–associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress

Liang Chu, Mack Y. Su, Leonard B. Maggi, Jr., Lan Lu, Chelsea Mullins, Seth Crosby, Gaofeng Huang, Wee Joo Chng, Ravi Vij, Michael H. Tomasson

J Clin Invest. 2012 Aug 1; 122(8): 2793–2806. Published online 2012 Jul 2. doi: 10.1172/JCI63051

PMCID:: PMC3408744

Abstract Article PDF–6.0M

Select item 666750013.

A protein-RNA interaction atlas of the ribosome biogenesis factor AATF

Rainer W. J. Kaiser, Michael Ignarski, Eric L. Van Nostrand, Christian K. Frese, Manaswita Jain, Sadrija Cukoski, Heide Heinen, Melanie Schaechter, Lisa Seufert, Konstantin Bunte, Peter Frommolt, Patrick Keller, Mark Helm, Katrin Bohl, Martin Höhne, Bernhard Schermer, Thomas Benzing, Katja Höpker, Christoph Dieterich, Gene W. Yeo, Roman-Ulrich Müller, Francesca Fabretti

Sci Rep. 2019; 9: 11071. Published online 2019 Jul 30. doi: 10.1038/s41598-019-47552-3

PMCID:: PMC6667500

Abstract Article PDF–2.8M

Select item 1085081814.

Cancer‐associated FBXW7 loss is synthetic lethal with pharmacological targeting of CDC7

Joseph S. Baxter, Rachel Brough, Dragomir B. Krastev, Feifei Song, Sandhya Sridhar, Aditi Gulati, John Alexander, Theodoros I. Roumeliotis, Zuza Kozik, Jyoti S. Choudhary, Syed Haider, Stephen J. Pettitt, Andrew N. J. Tutt, Christopher J. Lord

Mol Oncol. 2024 Feb; 18(2): 369–385. Published online 2023 Oct 22. doi: 10.1002/1878-0261.13537

PMCID:: PMC10850818

Abstract Article PDF–2.7M

Select item 562937215.

RECQ1 helicase is involved in replication stress survival and drug resistance in multiple myeloma

E Viziteu, B Klein, J Basbous, Y-L Lin, C Hirtz, C Gourzones, L Tiers, A Bruyer, L Vincent, C Grandmougin, A Seckinger, H Goldschmidt, A Constantinou, P Pasero, D Hose, J Moreaux

Leukemia. 2017 Oct; 31(10): 2104–2113. Prepublished online 2017 Feb 10. Published online 2017 Mar 10. doi: 10.1038/leu.2017.54

PMCID:: PMC5629372

Abstract Article PDF–2.9M

Select item 720220916.

Regulation of epidermal differentiation through KDF1‐mediated deubiquitination of IKKα

Yuanyuan Li, Liangfeng Tang, Jiping Yue, Xuewen Gou, Anning Lin, Scott D Weatherbee, Xiaoyang Wu

EMBO Rep. 2020 May 6; 21(5): e48566. Published online 2020 Apr 1. doi: 10.15252/embr.201948566

PMCID:: PMC7202209

Abstract Article PDF–6.2M

Select item 710529417.

STUB1 is targeted by the SUMO-interacting motif of EBNA1 to maintain Epstein-Barr Virus latency

Yuyan Wang, Shujuan Du, Caixia Zhu, Chong Wang, Nuoya Yu, Ziqi Lin, Jin Gan, Yi Guo, Xinxin Huang, Yuping He, Erle Robertson, Di Qu, Fang Wei, Qiliang Cai

PLoS Pathog. 2020 Mar; 16(3): e1008447. Published online 2020 Mar 16. doi: 10.1371/journal.ppat.1008447

PMCID:: PMC7105294

Abstract Article PDF–4.4M

Select item 796299418.

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy

Yanke Chen, Ting Jiang, Hongyi Zhang, Xingchun Gou, Cong Han, Jianhui Wang, Ann T. Chen, Jun Ma, Jun Liu, Zeming Chen, Xintao Jing, Hong Lei, Zhenzhen Wang, Youmei Bao, Mehdi Baqri, Yong Zhu, Ranjit S. Bindra, James E. Hansen, Jun Dou, Chen Huang, Jiangbing Zhou

Nat Cell Biol. Author manuscript; available in PMC 2021 Apr 1.

Published in final edited form as: Nat Cell Biol. 2020 Oct; 22(10): 1276–1285. Published online 2020 Oct 1. doi: 10.1038/s41556-020-00586-6