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1.
ChIP-on-chip analysis of thyroid hormone-regulated genes and their physiological significance
I-Hsiao Chung, Hsuan Liu, Yang-Hsiang Lin, Hsiang-Cheng Chi, Ya-Hui Huang, Chang-Ching Yang, Chau-Ting Yeh, Bertrand Chin-Ming Tan, Kwang-Huei Lin
Oncotarget. 2016 Apr 19; 7(16): 22448–22459. Published online 2016 Mar 8. doi: 10.18632/oncotarget.7988
PMCID:
PMC5008372
ArticlePDF–4.4M
2.
EIF2B2 mutations in vanishing white matter disease hypersuppress translation and delay recovery during the integrated stress response
Stephanie L. Moon, Roy Parker
RNA. 2018 Jun; 24(6): 841–852. doi: 10.1261/rna.066563.118
PMCID:
PMC5959252
ArticlePDF–4.8M
3.
The Relative Binding Affinities of PDZ Partners for CFTR: A Biochemical Basis for Efficient Endocytic Recycling
Patrick R. Cushing, Abigail Fellows, Daniel Villone, Prisca Boisguerin, Dean R. Madden
Biochemistry. Author manuscript; available in PMC 2009 Sep 23.
Published in final edited form as: Biochemistry. 2008 Sep 23; 47(38): 10084–10098. Published online 2008 Aug 29. doi: 10.1021/bi8003928
PMCID:
PMC2582146
ArticlePDF–3.4M
4.
Characterization of NERF, a novel transcription factor related to the Ets factor ELF-1.
P Oettgen, Y Akbarali, J Boltax, J Best, C Kunsch, T A Libermann
Mol Cell Biol. 1996 Sep; 16(9): 5091–5106. doi: 10.1128/mcb.16.9.5091
PMCID:
PMC231510
SummaryPDF–2.7M
5.
Interferons induce tyrosine phosphorylation of the eIF2α kinase PKR through activation of Jak1 and Tyk2
Qiaozhu Su, Shuo Wang, Dionissios Baltzis, Li-Ke Qu, Jennifer F Raven, Suiyang Li, Andrew Hoi-Tao Wong, Antonis E Koromilas
EMBO Rep. 2007 Mar; 8(3): 265–270. Published online 2007 Feb 9. doi: 10.1038/sj.embor.7400891
PMCID:
PMC1808029
ArticlePDF–208K
6.
Functional and Physical Interactions between AML1 Proteins and an ETS Protein, MEF: Implications for the Pathogenesis of t(8;21)-Positive Leukemias
Shifeng Mao, Richard C. Frank, Jin Zhang, Yasushi Miyazaki, Stephen D. Nimer
Mol Cell Biol. 1999 May; 19(5): 3635–3644. doi: 10.1128/mcb.19.5.3635
PMCID:
PMC84165
ArticlePDF–1.9M
7.
Critical Role for GATA3 in Mediating Tie2 Expression and Function in Large Vessel Endothelial Cells
Haihua Song, Jun-ichi Suehiro, Yasuharu Kanki, Yoshiko Kawai, Kenji Inoue, Hiroyuki Daida, Kiichiro Yano, Toshio Ohhashi, Peter Oettgen, William C. Aird, Tatsuhiko Kodama, Takashi Minami
J Biol Chem. 2009 Oct 16; 284(42): 29109–29124. Published online 2009 Aug 12. doi: 10.1074/jbc.M109.041145
PMCID:
PMC2781456
ArticlePDF–5.9M
8.
G3BP1, G3BP2 and CAPRIN1 Are Required for Translation of Interferon Stimulated mRNAs and Are Targeted by a Dengue Virus Non-coding RNA
Katell Bidet, Dhivya Dadlani, Mariano A. Garcia-Blanco
PLoS Pathog. 2014 Jul; 10(7): e1004242. Published online 2014 Jul 3. doi: 10.1371/journal.ppat.1004242
Correction in:
PLoS Pathog. 2017 Mar; 13(3): e1006295.
PMCID:
PMC4081823
ArticlePDF–1.8M
9.
The Ubiquitin Carboxyl Hydrolase BAP1 Forms a Ternary Complex with YY1 and HCF-1 and Is a Critical Regulator of Gene Expression
Helen Yu, Nazar Mashtalir, Salima Daou, Ian Hammond-Martel, Julie Ross, Guangchao Sui, Gerald W. Hart, Frank J. Rauscher, III, Elliot Drobetsky, Eric Milot, Yang Shi, El Bachir Affar
Mol Cell Biol. 2010 Nov; 30(21): 5071–5085. Published online 2010 Aug 30. doi: 10.1128/MCB.00396-10
PMCID:
PMC2953049
ArticlePDF–3.3M
10.
Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth
Bo Ram Kim, Etienne Coyaud, Estelle M. N. Laurent, Jonathan St-Germain, Emily Van de Laar, Ming-Sound Tsao, Brian Raught, Nadeem Moghal
Mol Cell Proteomics. 2017 Oct; 16(10): 1864–1888. Published online 2017 Aug 9. doi: 10.1074/mcp.M116.064451
PMCID:
PMC5629269
ArticlePDF–5.6M
11.
An improved smaller biotin ligase for BioID proximity labeling
Dae In Kim, Samuel C. Jensen, Kyle A. Noble, Birendra KC, Kenneth H. Roux, Khatereh Motamedchaboki, Kyle J. Roux
Mol Biol Cell. 2016 Apr 15; 27(8): 1188–1196. doi: 10.1091/mbc.E15-12-0844
PMCID:
PMC4831873
ArticlePDF–2.1M
12.
SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18
Manal Alsulami, Nayla Munawar, Eugene Dillon, Giorgio Oliviero, Kieran Wynne, Mona Alsolami, Catherine Moss, Peadar Ó Gaora, Fergal O'Meara, David Cotter, Gerard Cagney
Mol Cell Proteomics. 2019 Jul; 18(7): 1428–1436. Published online 2019 May 10. doi: 10.1074/mcp.RA119.001518
PMCID:
PMC6601208
ArticlePDF–1.8M
13.
Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner
Lauriane Vélot, Frédéric Lessard, Félix-Antoine Bérubé-Simard, Christophe Tav, Bertrand Neveu, Valentine Teyssier, Imène Boudaoud, Ugo Dionne, Noémie Lavoie, Steve Bilodeau, Frédéric Pouliot, Nicolas Bisson
Mol Cell Proteomics. 2021; 20: 100064. Published online 2021 Feb 26. doi: 10.1016/j.mcpro.2021.100064
PMCID:
PMC8050775
ArticlePDF–3.6M
14.
Interaction network of human early embryonic transcription factors
Lisa Gawriyski, Zenglai Tan, Xiaonan Liu, Iftekhar Chowdhury, Dicle Malaymar Pinar, Qin Zhang, Jere Weltner, Eeva-Mari Jouhilahti, Gong-Hong Wei, Juha Kere, Markku Varjosalo
EMBO Rep. 2024 Mar; 25(3): 1589–1622. Published online 2024 Jan 31. doi: 10.1038/s44319-024-00074-0
PMCID:
PMC10933267
ArticlePDF–2.9M
15.
Identification of proximal SUMO-dependent interactors using SUMO-ID
Orhi Barroso-Gomila, Fredrik Trulsson, Veronica Muratore, Iñigo Canosa, Laura Merino-Cacho, Ana Rosa Cortazar, Coralia Pérez, Mikel Azkargorta, Ibon Iloro, Arkaitz Carracedo, Ana M. Aransay, Felix Elortza, Ugo Mayor, Alfred C. O. Vertegaal, Rosa Barrio, James D. Sutherland
Nat Commun. 2021; 12: 6671. Published online 2021 Nov 18. doi: 10.1038/s41467-021-26807-6
PMCID:
PMC8602451
ArticlePDF–11M
16.
Impact of cytosine methylation on DNA binding specificities of human transcription factors
Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale
Science. Author manuscript; available in PMC 2021 Mar 30.
Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239
PMCID:
PMC8009048
ArticlePDF–2.6M
17.
The in vivo Interaction Landscape of Histones H3.1 and H3.3
Robert Siddaway, Scott Milos, Étienne Coyaud, Hwa Young Yun, Shahir M. Morcos, Sanja Pajovic, Eric I. Campos, Brian Raught, Cynthia Hawkins
Mol Cell Proteomics. 2022 Oct; 21(10): 100411. Published online 2022 Sep 9. doi: 10.1016/j.mcpro.2022.100411
PMCID:
PMC9540345
ArticlePDF–3.9M
18.
Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes
Jean-Philippe Lambert, Monika Tucholska, Christopher Go, James D.R. Knight, Anne-Claude Gingras
J Proteomics. Author manuscript; available in PMC 2016 Apr 6.
Published in final edited form as: J Proteomics. 2015 Apr 6; 118: 81–94. Published online 2014 Oct 2. doi: 10.1016/j.jprot.2014.09.011
PMCID:
PMC4383713
ArticlePDF–1.4M
19.
Large-scale characterization of HeLa cell nuclear phosphoproteins
Sean A. Beausoleil, Mark Jedrychowski, Daniel Schwartz, Joshua E. Elias, Judit Villén, Jiaxu Li, Martin A. Cohn, Lewis C. Cantley, Steven P. Gygi
Proc Natl Acad Sci U S A. 2004 Aug 17; 101(33): 12130–12135. Published online 2004 Aug 9. doi: 10.1073/pnas.0404720101
PMCID:
PMC514446
ArticlePDF–475K
20.
N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective
Veronique Jonckheere, Petra Van Damme
Int J Mol Sci. 2021 Apr; 22(7): 3690. Published online 2021 Apr 1. doi: 10.3390/ijms22073690
PMCID:
PMC8037211
ArticlePDF–6.5M

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