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Items: 1 to 20 of 187

1.
A unique subseafloor microbiosphere in the Mariana Trench driven by episodic sedimentation
Jiwen Liu, Da-Wei Li, Xinxin He, Ronghua Liu, Haojin Cheng, Chenglong Su, Mengna Chen, Yonghong Wang, Zhongsheng Zhao, Hanyue Xu, Zhangyu Cheng, Zicheng Wang, Nikolai Pedentchouk, David J. Lea-Smith, Jonathan D. Todd, Xiaoshou Liu, Meixun Zhao, Xiao-Hua Zhang
Mar Life Sci Technol. 2024 Feb; 6(1): 168–181. Published online 2024 Jan 23. doi: 10.1007/s42995-023-00212-y
PMCID:
PMC10902237
ArticlePDF–5.1M
2.
Metagenomic characterization of a novel non-ammonia-oxidizing Thaumarchaeota from hadal sediment
Ru-Yi Zhang, Yan-Ren Wang, Ru-Long Liu, Sung-Keun Rhee, Guo-Ping Zhao, Zhe-Xue Quan
Microbiome. 2024; 12: 7. Published online 2024 Jan 8. doi: 10.1186/s40168-023-01728-2
PMCID:
PMC10773090
ArticlePDF–9.2M
3.
A Survey of Archaeal Restriction–Modification Systems
Brian P. Anton, Richard J. Roberts
Microorganisms. 2023 Oct; 11(10): 2424. Published online 2023 Sep 28. doi: 10.3390/microorganisms11102424
PMCID:
PMC10609329
ArticlePDF–1.2M
4.
Planktonic and epilithic prokaryota community compositions in a large temperate river reflect climate change related seasonal shifts
Attila I. Engloner, Márta Vargha, Péter Kós, Andrea K. Borsodi
PLoS One. 2023; 18(9): e0292057. Published online 2023 Sep 21. doi: 10.1371/journal.pone.0292057
PMCID:
PMC10513243
ArticlePDF–2.1M
5.
Nitrification and beyond: metabolic versatility of ammonia oxidising archaea
Chloe L. Wright, Laura E. Lehtovirta-Morley
ISME J. 2023 Sep; 17(9): 1358–1368. Published online 2023 Jul 14. doi: 10.1038/s41396-023-01467-0
PMCID:
PMC10432482
ArticlePDF–1.7M
6.
Microbial Communities in Ferromanganese Sediments from the Northern Basin of Lake Baikal (Russia)
Anna Lomakina, Sergei Bukin, Olga Shubenkova, Tatyana Pogodaeva, Vyacheslav Ivanov, Yuri Bukin, Tamara Zemskaya
Microorganisms. 2023 Jul; 11(7): 1865. Published online 2023 Jul 24. doi: 10.3390/microorganisms11071865
PMCID:
PMC10386581
ArticlePDF–5.4M
7.
In-depth metataxonomic investigation reveals low richness, high intervariability, and diverse phylotype candidates of archaea in the human urogenital tract
Yeon Bee Kim, Tae Woong Whon, Joon Yong Kim, Juseok Kim, Yujin Kim, Se Hee Lee, Seong-Eun Park, Eun-Ju Kim, Hong-Seok Son, Seong Woon Roh
Sci Rep. 2023; 13: 11746. Published online 2023 Jul 20. doi: 10.1038/s41598-023-38710-9
PMCID:
PMC10359320
ArticlePDF–4.0M
8.
Using metatranscriptomics to better understand the role of microbial nitrogen cycling in coastal sediment benthic flux denitrification efficiency
Alexis J. Marshall, Lori Phillips, Andrew Longmore, Helen L. Hayden, Caixian Tang, Karla B. Heidelberg, Pauline Mele
Environ Microbiol Rep. 2023 Aug; 15(4): 308–323. Published online 2023 Mar 29. doi: 10.1111/1758-2229.13148
PMCID:
PMC10316378
ArticlePDF–4.2M
9.
Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
Jun Zhao, Jonathan Rodriguez, Willm Martens-Habbena
Front Microbiol. 2023; 14: 1140487. Published online 2023 Feb 23. doi: 10.3389/fmicb.2023.1140487
PMCID:
PMC9995467
ArticlePDF–6.2M
10.
Sediment microbial community structure associated to different ecological types of mangroves in Celestún, a coastal lagoon in the Yucatan Peninsula, Mexico
Elizabeth Selene Gómez-Acata, Claudia Teutli, Luisa I. Falcón, José Q. García-Maldonado, Alejandra Prieto-Davó, Alfredo Yanez-Montalvo, Santiago Cadena, Xavier Chiappa-Carrara, Jorge A. Herrera-Silveira
PeerJ. 2023; 11: e14587. Published online 2023 Feb 8. doi: 10.7717/peerj.14587
PMCID:
PMC9921989
ArticlePDF–2.9M
11.
Propagation of viral genomes by replicating ammonia-oxidising archaea during soil nitrification
Sungeun Lee, Ella T. Sieradzki, Graeme W. Nicol, Christina Hazard
ISME J. 2023 Feb; 17(2): 309–314. Published online 2022 Nov 21. doi: 10.1038/s41396-022-01341-5
PMCID:
PMC9859776
ArticlePDF–1.4M
12.
Contrasting diversity patterns of prokaryotes and protists over time and depth at the San-Pedro Ocean Time series
Yi-Chun Yeh, Jed A. Fuhrman
ISME Commun. 2022; 2: 36. Published online 2022 Apr 13. doi: 10.1038/s43705-022-00121-8
PMCID:
PMC9723720
ArticlePDF–4.0M
13.
Hydrological properties predict the composition of microbial communities cycling methane and nitrogen in rivers
Dave R. Clark, Boyd A. McKew, Andrew Binley, Catherine M. Heppell, Corinne Whitby, Mark Trimmer
ISME Commun. 2022; 2: 5. Published online 2022 Jan 21. doi: 10.1038/s43705-022-00087-7
PMCID:
PMC9723640
ArticlePDF–26M
14.
Host-specific symbioses and the microbial prey of a pelagic tunicate (Pyrosoma atlanticum)
Anne W. Thompson, Anna C. Ward, Carey P. Sweeney, Kelly R. Sutherland
ISME Commun. 2021; 1: 11. Published online 2021 Apr 14. doi: 10.1038/s43705-021-00007-1
PMCID:
PMC9723572
ArticlePDF–1.9M
15.
Contrasting sea ice conditions shape microbial food webs in Hudson Bay (Canadian Arctic)
Loïc Jacquemot, Adrien Vigneron, Jean-Éric Tremblay, Connie Lovejoy
ISME Commun. 2022; 2: 104. Published online 2022 Oct 23. doi: 10.1038/s43705-022-00192-7
PMCID:
PMC9723562
ArticlePDF–1.6M
16.
Fast-growing Arctic Fe–Mn deposits from the Kara Sea as the refuges for cosmopolitan marine microorganisms
Natalia Shulga, Sergey Abramov, Alexandra Klyukina, Konstantin Ryazantsev, Sergey Gavrilov
Sci Rep. 2022; 12: 21967. Published online 2022 Dec 20. doi: 10.1038/s41598-022-23449-6
PMCID:
PMC9768204
ArticlePDF–5.6M
17.
Spatial variation and metabolic diversity of microbial communities in the surface sediments of the Mariana Trench
Fangzhou Wang, Yue Zhang, Hongmei Jing, Hao Liu
Front Microbiol. 2022; 13: 1051999. Published online 2022 Dec 5. doi: 10.3389/fmicb.2022.1051999
PMCID:
PMC9760864
ArticlePDF–4.5M
18.
Microbial Diversity in Groundwater and Its Response to Seawater Intrusion in Beihai City, Southern China
Zhonglin Ma, Long Gao, Mingxue Sun, Yongjie Liao, Shijie Bai, Zijun Wu, Jiangtao Li
Front Microbiol. 2022; 13: 876665. Published online 2022 Jul 13. doi: 10.3389/fmicb.2022.876665
PMCID:
PMC9328385
ArticlePDF–10M
19.
Variations in Marine Bacterial and Archaeal Communities during an Ulva prolifera Green Tide in Coastal Qingdao Areas
Guihua Zhao, Hui He, Hualong Wang, Yantao Liang, Cui Guo, Hongbing Shao, Yong Jiang, Min Wang
Microorganisms. 2022 Jun; 10(6): 1204. Published online 2022 Jun 13. doi: 10.3390/microorganisms10061204
PMCID:
PMC9228619
ArticlePDF–2.7M
20.
A Synthesis of Viral Contribution to Marine Nitrogen Cycling
Shuai Wang, Yu Yang, Jiaojiao Jing
Front Microbiol. 2022; 13: 834581. Published online 2022 Apr 25. doi: 10.3389/fmicb.2022.834581
PMCID:
PMC9083009
ArticlePDF–1.6M

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