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Items: 1 to 20 of 24

1.
Identification of a Putative CodY Regulon in the Gram-Negative Phylum Synergistetes
Jianing Geng, Sainan Luo, Hui-Ru Shieh, Hsing-Yi Wang, Songnian Hu, Yi-Ywan M. Chen
Int J Mol Sci. 2022 Jul; 23(14): 7911. Published online 2022 Jul 18. doi: 10.3390/ijms23147911
PMCID:
PMC9318921
AbstractArticlePDF–5.2M
2.
Enhanced electrical power generation using flame-oxidized stainless steel anode in microbial fuel cells and the anodic community structure
Takahiro Yamashita, Mitsuyoshi Ishida, Shiho Asakawa, Hiroyuki Kanamori, Harumi Sasaki, Akifumi Ogino, Yuichi Katayose, Tamao Hatta, Hiroshi Yokoyama
Biotechnol Biofuels. 2016; 9: 62. Published online 2016 Mar 12. doi: 10.1186/s13068-016-0480-7
PMCID:
PMC4788886
AbstractArticlePDF–2.7M
3.
CLCAs - A Family of Metalloproteases of Intriguing Phylogenetic Distribution and with Cases of Substituted Catalytic Sites
Anna Lenart, Małgorzata Dudkiewicz, Marcin Grynberg, Krzysztof Pawłowski
PLoS One. 2013; 8(5): e62272. Published online 2013 May 9. doi: 10.1371/journal.pone.0062272
PMCID:
PMC3650047
AbstractArticlePDF–2.7M
4.
Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGAT)
Konstantinos Mavromatis, Erko Stackebrandt, Brittany Held, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan-Fang Cheng, Roxanne Tapia, Lynne A. Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Natalia Mikhailova, Marcel Huntemann, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Manfred Rohde, Stefan Spring, Markus Göker, Tanja Woyke, John C. Detter, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Hans-Peter Klenk, Nikos C. Kyrpides
Stand Genomic Sci. 2013 Apr 15; 8(1): 47–57. Published online 2013 Apr 15. doi: 10.4056/sigs.3547050
PMCID:
PMC3739175
AbstractArticlePDF–3.2M
5.
The tracrRNA and Cas9 families of type II CRISPR-Cas immunity systems
Krzysztof Chylinski, Anaïs Le Rhun, Emmanuelle Charpentier
RNA Biol. 2013 May 1; 10(5): 726–737. Published online 2013 Apr 5. doi: 10.4161/rna.24321
PMCID:
PMC3737331
AbstractArticlePDF–3.7M
6.
Passage of Campylobacter jejuni through the chicken reservoir or mice promotes phase variation in contingency genes Cj0045 and Cj0170 that strongly associates with colonization and disease in a mouse model
Joo-Sung Kim, Katherine A. Artymovich, David F. Hall, Eric J. Smith, Richard Fulton, Julia Bell, Leslie Dybas, Linda S. Mansfield, Robert Tempelman, David L. Wilson, John E. Linz
Microbiology (Reading) 2012 May; 158(Pt 5): 1304–1316. doi: 10.1099/mic.0.057158-0
PMCID:
PMC3542822
AbstractArticlePDF–319K
7.
Potential for Direct Interspecies Electron Transfer in Methanogenic Wastewater Digester Aggregates
Masahiko Morita, Nikhil S. Malvankar, Ashley E. Franks, Zarath M. Summers, Ludovic Giloteaux, Amelia E. Rotaru, Camelia Rotaru, Derek R. Lovley
mBio. 2011 Jul-Aug; 2(4): e00159-11. Published online 2011 Aug 23. doi: 10.1128/mBio.00159-11
PMCID:
PMC3157894
AbstractArticlePDF–1.0M
8.
Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3)
Sam Pitluck, Montri Yasawong, Brittany Held, Alla Lapidus, Matt Nolan, Alex Copeland, Susan Lucas, Tijana Glavina Del Rio, Hope Tice, Jan-Fang Cheng, Olga Chertkov, Lynne Goodwin, Roxane Tapia, Cliff Han, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun-Juan Chang, Cynthia D. Jeffries, Rüdiger Pukall, Stefan Spring, Manfred Rohde, Johannes Sikorski, Markus Göker, Tanja Woyke, James Bristow, Jonathan A. Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans-Peter Klenk
Stand Genomic Sci. 2010 Dec 31; 3(3): 285–293. Published online 2010 Nov 20. doi: 10.4056/sigs.1253298
PMCID:
PMC3035310
AbstractArticlePDF–2.5M
9.
Peptidolytic Microbial Community of Methanogenic Reactors from two Modified Uasbs of Brewery Industries
C. Díaz, S. Baena, B.K.C. Patel, M.L. Fardeau
Braz J Microbiol. 2010 Jul-Sep; 41(3): 707–717. Published online 2010 Sep 1. doi: 10.1590/S1517-83822010000300022
PMCID:
PMC3768664
AbstractArticlePDF–436K
10.
Cultivation of a Synergistetes strain representing a previously uncultivated lineage
S R Vartoukian, R M Palmer, W G Wade
Environ Microbiol. 2010 Apr; 12(4): 916–928. doi: 10.1111/j.1462-2920.2009.02135.x
PMCID:
PMC2916210
AbstractArticlePDF–1.5M
11.
Pyramidobacter piscolens gen. nov., sp. nov., a member of the phylum ‘Synergistetes’ isolated from the human oral cavity
Julia Downes, Sonia R. Vartoukian, Floyd E. Dewhirst, Jacques Izard, Tsute Chen, Wen-Han Yu, Iain C. Sutcliffe, William G. Wade
Int J Syst Evol Microbiol. 2009 May; 59(Pt 5): 972–980. doi: 10.1099/ijs.0.000364-0
PMCID:
PMC2868594
AbstractArticlePDF–266K
12.
Identification of the mechanism for dehalorespiration of monofluoroacetate in the phylum Synergistota
Lex E. X. Leong, Stuart E. Denman, Seungha Kang, Stanislas Mondot, Philip Hugenholtz, Chris S. McSweeney
Anim Biosci. 2024 Feb; 37(2): 396–403. Published online 2023 Dec 29. doi: 10.5713/ab.23.0351
PMCID:
PMC10838667
AbstractArticlePDF–1.9M
13.
In silico discovery of the myxosortases that process MYXO-CTERM and three novel prokaryotic C-terminal protein-sorting signals that share invariant Cys residues
Daniel H. Haft
J Bacteriol. 2024 Jan; 206(1): e00173-23. Published online 2023 Dec 12. doi: 10.1128/jb.00173-23
PMCID:
PMC10810001
AbstractArticlePDF–1.2M
14.
Large-scale metabolic interaction network of the mouse and human gut microbiota
Roktaek Lim, Josephine Jill T. Cabatbat, Thomas L. P. Martin, Haneul Kim, Seunghyeon Kim, Jaeyun Sung, Cheol-Min Ghim, Pan-Jun Kim
Sci Data. 2020; 7: 204. Published online 2020 Jun 26. doi: 10.1038/s41597-020-0516-5
Correction in:
Sci Data. 2020; 7: 272.
PMCID:
PMC7320173
AbstractArticlePDF–1.6M
15.
Giant flagellins form thick flagellar filaments in two species of marine γ-proteobacteria
Nicholas M. Thomson, Josie L. Ferreira, Teige R. Matthews-Palmer, Morgan Beeby, Mark J. Pallen
PLoS One. 2018; 13(11): e0206544. Published online 2018 Nov 21. doi: 10.1371/journal.pone.0206544
PMCID:
PMC6248924
AbstractArticlePDF–3.2M
16.
Novel m4C modification in type I restriction-modification systems
Richard D. Morgan, Yvette A. Luyten, Samuel A. Johnson, Emily M. Clough, Tyson A. Clark, Richard J. Roberts
Nucleic Acids Res. 2016 Nov 2; 44(19): 9413–9425. Published online 2016 Aug 31. doi: 10.1093/nar/gkw743
PMCID:
PMC5100572
AbstractArticlePDF–7.5M
17.
The Crystal Structure of Thermotoga maritima Class III Ribonucleotide Reductase Lacks a Radical Cysteine Pre-Positioned in the Active Site
Oskar Aurelius, Renzo Johansson, Viktoria Bågenholm, Daniel Lundin, Fredrik Tholander, Alexander Balhuizen, Tobias Beck, Margareta Sahlin, Britt-Marie Sjöberg, Etienne Mulliez, Derek T. Logan
PLoS One. 2015; 10(7): e0128199. Published online 2015 Jul 6. doi: 10.1371/journal.pone.0128199
PMCID:
PMC4493059
AbstractArticlePDF–2.4M
18.
Phylogenetically Driven Sequencing of Extremely Halophilic Archaea Reveals Strategies for Static and Dynamic Osmo-response
Erin A. Becker, Phillip M. Seitzer, Andrew Tritt, David Larsen, Megan Krusor, Andrew I. Yao, Dongying Wu, Dominique Madern, Jonathan A. Eisen, Aaron E. Darling, Marc T. Facciotti
PLoS Genet. 2014 Nov; 10(11): e1004784. Published online 2014 Nov 13. doi: 10.1371/journal.pgen.1004784
PMCID:
PMC4230888
AbstractArticlePDF–1.6M
19.
The class III ribonucleotide reductase from Neisseria bacilliformis can utilize thioredoxin as a reductant
Yifeng Wei, Michael A. Funk, Leonardo A. Rosado, Jiyeon Baek, Catherine L. Drennan, JoAnne Stubbe
Proc Natl Acad Sci U S A. 2014 Sep 9; 111(36): E3756–E3765. Published online 2014 Aug 25. doi: 10.1073/pnas.1414396111
PMCID:
PMC4246965
AbstractArticlePDF–1.5M
20.
Inteins as indicators of gene flow in the halobacteria
Shannon M. Soucy, Matthew S. Fullmer, R. Thane Papke, Johann Peter Gogarten
Front Microbiol. 2014; 5: 299. Published online 2014 Jun 26. doi: 10.3389/fmicb.2014.00299
PMCID:
PMC4071816
AbstractArticlePDF–3.1M

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