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Select item 106732331.

Diversity, Taxonomic Novelty, and Encoded Functions of Salar de Ascotán Microbiota, as Revealed by Metagenome-Assembled Genomes

Marcelo Veloso, Angie Waldisperg, Patricio Arros, Camilo Berríos-Pastén, Joaquín Acosta, Hazajem Colque, Macarena A. Varas, Miguel L. Allende, Luis H. Orellana, Andrés E. Marcoleta

Microorganisms. 2023 Nov; 11(11): 2819. Published online 2023 Nov 20. doi: 10.3390/microorganisms11112819

PMCID:: PMC10673233

Abstract Article PDF–2.9M

Select item 104916862.

A comprehensive genomic catalog from global cold seeps

Yingchun Han, Chuwen Zhang, Zhuoming Zhao, Yongyi Peng, Jing Liao, Qiuyun Jiang, Qing Liu, Zongze Shao, Xiyang Dong

Sci Data. 2023; 10: 596. Published online 2023 Sep 8. doi: 10.1038/s41597-023-02521-4

PMCID:: PMC10491686

Abstract Article PDF–2.3M

Select item 103672593.

Microbe-driven elemental cycling enables microbial adaptation to deep-sea ferromanganese nodule sediment fields

Dechao Zhang, Xudong Li, Yuehong Wu, Xuewei Xu, Yanxia Liu, Benze Shi, Yujie Peng, Dadong Dai, Zhongli Sha, Jinshui Zheng

Microbiome. 2023; 11: 160. Published online 2023 Jul 25. doi: 10.1186/s40168-023-01601-2

PMCID:: PMC10367259

Abstract Article PDF–7.2M

Select item 95995184.

Genome-Resolved Metagenomics Informs the Functional Ecology of Uncultured Acidobacteria in Redox Oscillated Sphagnum Peat

Linta Reji, Xinning Zhang

mSystems. 2022 Sep-Oct; 7(5): e00055-22. Published online 2022 Aug 29. doi: 10.1128/msystems.00055-22

PMCID:: PMC9599518

Abstract Article PDF–2.1M

Select item 93861475.

Genome analysis of the candidate phylum MBNT15 bacterium from a boreal peatland predicted its respiratory versatility and dissimilatory iron metabolism

Shahjahon Begmatov, Alexey V. Beletsky, Svetlana N. Dedysh, Andrey V. Mardanov, Nikolai V. Ravin

Front Microbiol. 2022; 13: 951761. Published online 2022 Aug 4. doi: 10.3389/fmicb.2022.951761

PMCID:: PMC9386147

Abstract Article PDF–7.5M

Select item 92301036.

Plastisphere community assemblage of aquatic environment: plastic-microbe interaction, role in degradation and characterization technologies

Sujata Dey, Ajaya Kumar Rout, Bijay Kumar Behera, Koushik Ghosh

Environ Microbiome. 2022; 17: 32. Published online 2022 Jun 24. doi: 10.1186/s40793-022-00430-4

PMCID:: PMC9230103

Abstract Article PDF–1.5M

Select item 93817757.

Globally distributed mining-impacted environments are underexplored hotspots of multidrug resistance genes

Xinzhu Yi, Jie-Liang Liang, Jian-Qiang Su, Pu Jia, Jing-li Lu, Jin Zheng, Zhang Wang, Shi-wei Feng, Zhen-hao Luo, Hong-xia Ai, Bin Liao, Wen-sheng Shu, Jin-tian Li, Yong-Guan Zhu

ISME J. 2022 Sep; 16(9): 2099–2113. Published online 2022 Jun 10. doi: 10.1038/s41396-022-01258-z

PMCID:: PMC9381775

Abstract Article PDF–18M

Select item 91891998.

Procedure of the overexpression, purification and crystallization of BLEG-1, a bifunctional and evolutionary divergent B3 metallo-β-lactamase, for structure-function studies

Shaw Xian Au, Noor Dina Muhd Noor, Hiroyoshi Matsumura, Raja Noor Zaliha Raja Abdul Rahman, Yahaya M. Normi

MethodsX. 2022; 9: 101740. Published online 2022 May 27. doi: 10.1016/j.mex.2022.101740

PMCID:: PMC9189199

Abstract Article PDF–1.3M

Select item 92254489.

Recent Advances in the Heterologous Expression of Biosynthetic Gene Clusters for Marine Natural Products

Yushan Xu, Xinhua Du, Xionghui Yu, Qian Jiang, Kaiwen Zheng, Jinzhong Xu, Pinmei Wang

Mar Drugs. 2022 Jun; 20(6): 341. Published online 2022 May 24. doi: 10.3390/md20060341

PMCID:: PMC9225448

Abstract Article PDF–1.3M

Select item 932507610.

Metagenomic evidence of a novel family of anammox bacteria in a subsea environment

Carolina Suarez, Paula Dalcin Martins, Mike S.M. Jetten, Sabina Karačić, Britt Marie Wilén, Oskar Modin, Per Hagelia, Malte Hermansson, Frank Persson

Environ Microbiol. 2022 May; 24(5): 2348–2360. Published online 2022 Apr 18. doi: 10.1111/1462-2920.16006

PMCID:: PMC9325076

Abstract Article PDF–1.8M

Select item 901218311.

Phylogeny, distribution and potential metabolism of candidate bacterial phylum KSB1

Qingmei Li, Yingli Zhou, Rui Lu, Pengfei Zheng, Yong Wang

PeerJ. 2022; 10: e13241. Published online 2022 Apr 12. doi: 10.7717/peerj.13241

PMCID:: PMC9012183

Abstract Article PDF–10M

Select item 930417512.

Environmental paleomicrobiology: using DNA preserved in aquatic sediments to its full potential

Eric Capo, Marie‐Eve Monchamp, Marco J. L. Coolen, Isabelle Domaizon, Linda Armbrecht, Stefan Bertilsson

Environ Microbiol. 2022 May; 24(5): 2201–2209. Published online 2022 Feb 7. doi: 10.1111/1462-2920.15913

PMCID:: PMC9304175

Abstract Article PDF–634K

Select item 903906013.

Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution

Robert M. Bowers, Stephen Nayfach, Frederik Schulz, Sean P. Jungbluth, Ilona A. Ruhl, Andriy Sheremet, Janey Lee, Danielle Goudeau, Emiley A. Eloe-Fadrosh, Ramunas Stepanauskas, Rex R. Malmstrom, Nikos C. Kyrpides, Peter F. Dunfield, Tanja Woyke

ISME J. 2022 May; 16(5): 1337–1347. Published online 2021 Dec 30. doi: 10.1038/s41396-021-01178-4

PMCID:: PMC9039060

Abstract Article PDF–4.7M

Select item 859773014.

Undervalued Pseudo-nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers

Kazumori Mise, Yoko Masuda, Keishi Senoo, Hideomi Itoh

mSphere. 2021 Nov-Dec; 6(6): e00785-21. Published online 2021 Nov 17. doi: 10.1128/msphere.00785-21

PMCID:: PMC8597730

Abstract Article PDF–1.4M

Select item 857999515.

Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring

Maria C. Fernandes-Martins, Lisa M. Keller, Mason Munro-Ehrlich, Kathryn R. Zimlich, Madelyn K. Mettler, Alexis M. England, Rita Clare, Kevin Surya, Everett L. Shock, Daniel R. Colman, Eric S. Boyd

Appl Environ Microbiol. 2021 Dec; 87(23): e01598-21. Prepublished online 2021 Sep 29. Published online 2021 Nov 10. doi: 10.1128/AEM.01598-21