txid666685[Organism:noexp] - PMC

Jianrong Huang, Adrian Mellage, Julian Pavon Garcia, David Glöckler, Susanne Mahler, Martin Elsner, Natalia Jakus, Muammar Mansor, Hongchen Jiang, Andreas Kappler

Appl Environ Microbiol. 2023 Mar; 89(3): e00196-23. Published online 2023 Mar 6. doi: 10.1128/aem.00196-23

PMCID:: PMC10057050

Abstract Article PDF–1.9M

Select item 100153374.

Soil and fine root-associated microbial communities are niche dependent and influenced by copper fungicide treatment during tea plant cultivation

Ali Inayat Mallano, Jie Yu, Tabys Dina, Fangdong Li, Tiejun Ling, Naveed Ahmad, Jeffrey Bennetzen, Wei Tong

Hortic Res. 2023 Mar; 10(3): uhac285. Published online 2022 Dec 29. doi: 10.1093/hr/uhac285

PMCID:: PMC10015337

Article PDF–1.0M

Select item 96921265.

Narrowband ultraviolet B response in cutaneous T-cell lymphoma is characterized by increased bacterial diversity and reduced Staphylococcus aureus and Staphylococcus lugdunensis

Madeline J. Hooper, Gail L. Enriquez, Francesca L. Veon, Tessa M. LeWitt, Dagmar Sweeney, Stefan J. Green, Patrick C. Seed, Jaehyuk Choi, Joan Guitart, Michael B. Burns, Xiaolong A. Zhou

Front Immunol. 2022; 13: 1022093. Published online 2022 Nov 11. doi: 10.3389/fimmu.2022.1022093

PMCID:: PMC9692126

Abstract Article PDF–7.3M

Select item 93399926.

Ubiquity and Diversity of Cold Adapted Denitrifying Bacteria Isolated From Diverse Antarctic Ecosystems

Angela Cabezas, Gastón Azziz, Patricia Bovio-Winkler, Laura Fuentes, Lucía Braga, Jorge Wenzel, Silvia Sabaris, Silvana Tarlera, Claudia Etchebehere

Front Microbiol. 2022; 13: 827228. Published online 2022 Jul 18. doi: 10.3389/fmicb.2022.827228

PMCID:: PMC9339992

Abstract Article PDF–2.0M

Select item 93179637.

Development of a Markerless Deletion Mutagenesis System in Nitrate-Reducing Bacterium Rhodanobacter denitrificans

Xuanyu Tao, Aifen Zhou, Megan L. Kempher, Jiantao Liu, Mu Peng, Yuan Li, Jonathan P. Michael, Romy Chakraborty, Adam M. Deutschbauer, Adam P. Arkin, Jizhong Zhou

Appl Environ Microbiol. 2022 Jul; 88(14): e00401-22. Published online 2022 Jun 23. doi: 10.1128/aem.00401-22

PMCID:: PMC9317963

Abstract Article PDF–2.2M

Select item 93912608.

Gut dysbiosis in cutaneous T‐cell lymphoma is characterized by shifts in relative abundances of specific bacterial taxa and decreased diversity in more advanced disease

M.J. Hooper, T.M. LeWitt, Y. Pang, F.L. Veon, G.E. Chlipala, L. Feferman, S.J. Green, D. Sweeney, K.T. Bagnowski, M.B. Burns, P.C. Seed, J. Choi, J. Guitart, X.A. Zhou

J Eur Acad Dermatol Venereol. 2022 Sep; 36(9): 1552–1563. Published online 2022 Apr 19. doi: 10.1111/jdv.18125

PMCID:: PMC9391260

Abstract Article PDF–1.5M

Select item 89816969.

The methane-driven interaction network in terrestrial methane hotspots

Thomas Kaupper, Lucas W. Mendes, Anja Poehlein, Daria Frohloff, Stephan Rohrbach, Marcus A. Horn, Adrian Ho

Environ Microbiome. 2022; 17: 15. Published online 2022 Apr 5. doi: 10.1186/s40793-022-00409-1

PMCID:: PMC8981696

Abstract Article PDF–1.2M

Select item 677605610.

Soil HONO emissions at high moisture content are driven by microbial nitrate reduction to nitrite: tackling the HONO puzzle

Dianming Wu, Marcus A. Horn, Thomas Behrendt, Stefan Müller, Jingsong Li, Jeff A. Cole, Baohua Xie, Xiaotang Ju, Guo Li, Michael Ermel, Robert Oswald, Janine Fröhlich-Nowoisky, Peter Hoor, Chunsheng Hu, Min Liu, Meinrat O. Andreae, Ulrich Pöschl, Yafang Cheng, Hang Su, Ivonne Trebs, Bettina Weber, Matthias Sörgel

ISME J. 2019 Jul; 13(7): 1688–1699. Published online 2019 Mar 4. doi: 10.1038/s41396-019-0379-y

PMCID:: PMC6776056

Abstract Article PDF–1.9M

Select item 593032211.

Insights into Carbon Metabolism Provided by Fluorescence In Situ Hybridization-Secondary Ion Mass Spectrometry Imaging of an Autotrophic, Nitrate-Reducing, Fe(II)-Oxidizing Enrichment Culture

Claudia Tominski, Tina Lösekann-Behrens, Alexander Ruecker, Nikolas Hagemann, Sara Kleindienst, Carsten W. Mueller, Carmen Höschen, Ingrid Kögel-Knabner, Andreas Kappler, Sebastian Behrens

Appl Environ Microbiol. 2018 May 1; 84(9): e02166-17. Prepublished online 2018 Mar 2. Published online 2018 Apr 16. doi: 10.1128/AEM.02166-17

PMCID:: PMC5930322

Abstract Article PDF–1.4M

Select item 581606012.

Community Composition of Nitrous Oxide-Related Genes in Salt Marsh Sediments Exposed to Nitrogen Enrichment

John H. Angell, Xuefeng Peng, Qixing Ji, Ian Craick, Amal Jayakumar, Patrick J. Kearns, Bess B. Ward, Jennifer L. Bowen

Front Microbiol. 2018; 9: 170. Published online 2018 Feb 12. doi: 10.3389/fmicb.2018.00170

PMCID:: PMC5816060

Abstract Article PDF–1.9M

Select item 481726513.

Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community

Christopher L. Hemme, Stefan J. Green, Lavanya Rishishwar, Om Prakash, Angelica Pettenato, Romy Chakraborty, Adam M. Deutschbauer, Joy D. Van Nostrand, Liyou Wu, Zhili He, I. King Jordan, Terry C. Hazen, Adam P. Arkin, Joel E. Kostka, Jizhong Zhou

mBio. 2016 Mar-Apr; 7(2): e02234-15. Published online 2016 Apr 5. doi: 10.1128/mBio.02234-15

PMCID:: PMC4817265

Abstract Article PDF–4.3M

Select item 341625114.

Genome Sequences for Six Rhodanobacter Strains, Isolated from Soils and the Terrestrial Subsurface, with Variable Denitrification Capabilities

Joel E. Kostka, Stefan J. Green, Lavanya Rishishwar, Om Prakash, Lee S. Katz, Leonardo Mariño-Ramírez, I. King Jordan, Christine Munk, Natalia Ivanova, Natalia Mikhailova, David B. Watson, Steven D. Brown, Anthony V. Palumbo, Scott C. Brooks

J Bacteriol. 2012 Aug; 194(16): 4461–4462. doi: 10.1128/JB.00871-12

PMCID:: PMC3416251

Abstract Article PDF–96K

Select item 998771415.

Comparative metagenomic analysis reveals rhizosphere microbial community composition and functions help protect grapevines against salt stress

Bo Wang, Xicheng Wang, Zhuangwei Wang, Kefeng Zhu, Weimin Wu

Front Microbiol. 2023; 14: 1102547. Published online 2023 Feb 20. doi: 10.3389/fmicb.2023.1102547

PMCID:: PMC9987714

Abstract Article PDF–7.8M

Select item 976896516.

Microbiome and metagenomic analysis of Lake Hillier Australia reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations

Maria A. Sierra, Krista A. Ryon, Braden T. Tierney, Jonathan Foox, Chandrima Bhattacharya, Evan Afshin, Daniel Butler, Stefan J. Green, W. Kelley Thomas, Jordan Ramsdell, Nathan J. Bivens, Ken McGrath, Christopher E. Mason, Scott W. Tighe

Environ Microbiome. 2022; 17: 60. Published online 2022 Dec 21. doi: 10.1186/s40793-022-00455-9

PMCID:: PMC9768965

Abstract Article PDF–9.7M

Select item 949570317.

Modulating Gene Expression within a Microbiome Based on Computational Models

Liyam Chitayat Levi, Ido Rippin, Moran Ben Tulila, Rotem Galron, Tamir Tuller

Biology (Basel) 2022 Sep; 11(9): 1301. Published online 2022 Aug 31. doi: 10.3390/biology11091301

PMCID:: PMC9495703

Abstract Article PDF–9.8M

Select item 925356518.

Ralstonia solanacearum Infection Disturbed the Microbiome Structure Throughout the Whole Tobacco Crop Niche as Well as the Nitrogen Metabolism in Soil

Zhaobao Wang, Yuzhen Zhang, Guodong Bo, Yanping Zhang, Yu Chen, Minchong Shen, Peng Zhang, Guitong Li, Jie Zhou, Zhengfeng Li, Jianming Yang

Front Bioeng Biotechnol. 2022; 10: 903555. Published online 2022 Jun 21. doi: 10.3389/fbioe.2022.903555

PMCID:: PMC9253565

Abstract Article PDF–3.7M

Select item 918111919.

Current Methods for Recombination Detection in Bacteria

Anton E. Shikov, Yury V. Malovichko, Anton A. Nizhnikov, Kirill S. Antonets

Int J Mol Sci. 2022 Jun; 23(11): 6257. Published online 2022 Jun 2. doi: 10.3390/ijms23116257

PMCID:: PMC9181119

Abstract Article PDF–665K

Select item 953073120.

Isolation and Characterization of Phosphate Solubilizing Bacteria from Paddy Field Soils in Japan

Jean Louise Cocson Damo, Maria Daniela Artigas Ramirez, Shin-ichiro Agake, Mannix Pedro, Marilyn Brown, Hitoshi Sekimoto, Tadashi Yokoyama, Soh Sugihara, Shin Okazaki, Naoko Ohkama-Ohtsu

Microbes Environ. 2022; 37(2): ME21085. Published online 2022 May 21. doi: 10.1264/jsme2.ME21085