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Select item 96675321.

Identifying bioaugmentation candidates for bioremediation of polycyclic aromatic hydrocarbons in contaminated estuarine sediment of the Elizabeth River, VA, USA

Savannah J. Volkoff, Daniel L. Rodriguez, David R. Singleton, Alexander W. McCumber, Michael D. Aitken, Jill R. Stewart, Claudia K. Gunsch

Appl Microbiol Biotechnol. Author manuscript; available in PMC 2022 Nov 16.

Published in final edited form as: Appl Microbiol Biotechnol. 2022 Feb; 106(4): 1715–1727. Published online 2022 Jan 28. doi: 10.1007/s00253-021-11754-5

PMCID:: PMC9667532

Abstract Article PDF–1.3M

Select item 85655772.

Nitrogeniibacter aestuarii sp. nov., a Novel Nitrogen-Fixing Bacterium Affiliated to the Family Zoogloeaceae and Phylogeny of the Family Zoogloeaceae Revisited

Zhaobin Huang, Renju Liu, Fenghua Chen, Qiliang Lai, Aharon Oren, Zongze Shao

Front Microbiol. 2021; 12: 755908. Published online 2021 Oct 20. doi: 10.3389/fmicb.2021.755908

PMCID:: PMC8565577

Abstract Article PDF–6.7M

Select item 78257973.

Comparative Genomics Provides Insights into the Taxonomy of Azoarcus and Reveals Separate Origins of Nif Genes in the Proposed Azoarcus and Aromatoleum Genera

Roberto Tadeu Raittz, Camilla Reginatto De Pierri, Marta Maluk, Marcelo Bueno Batista, Manuel Carmona, Madan Junghare, Helisson Faoro, Leonardo M. Cruz, Federico Battistoni, Emanuel de Souza, Fábio de Oliveira Pedrosa, Wen-Ming Chen, Philip S. Poole, Ray A. Dixon, Euan K. James

Genes (Basel) 2021 Jan; 12(1): 71. Published online 2021 Jan 7. doi: 10.3390/genes12010071

PMCID:: PMC7825797

Abstract Article PDF–3.5M

Select item 72511024.

Novel cultivated endophytic Verrucomicrobia reveal deep-rooting traits of bacteria to associate with plants

Wiebke Bünger, Xun Jiang, Jana Müller, Thomas Hurek, Barbara Reinhold-Hurek

Sci Rep. 2020; 10: 8692. Published online 2020 May 26. doi: 10.1038/s41598-020-65277-6

PMCID:: PMC7251102

Abstract Article PDF–4.9M

Select item 70129765.

Genome analysis provides insights into microaerobic toluene-degradation pathway of Zoogloea oleivorans Buc^T

András Táncsics, Milán Farkas, Balázs Horváth, Gergely Maróti, Lauren M. Bradford, Tillmann Lueders, Balázs Kriszt

Arch Microbiol. 2020; 202(2): 421–426. Published online 2019 Oct 28. doi: 10.1007/s00203-019-01743-8

PMCID:: PMC7012976

Abstract Article PDF–973K

Select item 64567456.

A Novel Redox-Sensing Histidine Kinase That Controls Carbon Catabolite Repression in Azoarcus sp. CIB

J. Andrés Valderrama, Helena Gómez-Álvarez, Zaira Martín-Moldes, M. Álvaro Berbís, F. Javier Cañada, Gonzalo Durante-Rodríguez, Eduardo Díaz

mBio. 2019 Mar-Apr; 10(2): e00059-19. Published online 2019 Apr 9. doi: 10.1128/mBio.00059-19

PMCID:: PMC6456745

Abstract Article PDF–935K

Select item 56586197.

Engineering a bzd cassette for the anaerobic bioconversion of aromatic compounds

María Teresa Zamarro, María J. L. Barragán, Manuel Carmona, José Luis García, Eduardo Díaz

Microb Biotechnol. 2017 Nov; 10(6): 1418–1425. Published online 2017 Jul 24. doi: 10.1111/1751-7915.12746

PMCID:: PMC5658619

Abstract Article PDF–337K

Select item 38348568.

Nitrogen fixation in distinct microbial niches within a chemoautotrophy-driven cave ecosystem

Mahesh S Desai, Karoline Assig, Sharmishtha Dattagupta

ISME J. 2013 Dec; 7(12): 2411–2423. Published online 2013 Aug 8. doi: 10.1038/ismej.2013.126

PMCID:: PMC3834856

Abstract Article PDF–640K

Select item 29762749.

Quantification of Nitrogen Reductase and Nitrite Reductase Genes in Soil of Thinned and Clear-Cut Douglas-Fir Stands by Using Real-Time PCR

David J. Levy-Booth, Richard S. Winder

Appl Environ Microbiol. 2010 Nov; 76(21): 7116–7125. Published online 2010 Aug 27. doi: 10.1128/AEM.02188-09

PMCID:: PMC2976274

Abstract Article PDF–584K

Select item 106517710.

16S rRNA Gene-Based Oligonucleotide Microarray for Environmental Monitoring of the Betaproteobacterial Order “Rhodocyclales”

Alexander Loy, Claudia Schulz, Sebastian Lücker, Andreas Schöpfer-Wendels, Kilian Stoecker, Christian Baranyi, Angelika Lehner, Michael Wagner

Appl Environ Microbiol. 2005 Mar; 71(3): 1373–1386. doi: 10.1128/AEM.71.3.1373-1386.2005

PMCID:: PMC1065177

Abstract Article PDF–466K

Select item 9525311.

Role of a Ferredoxin Gene Cotranscribed with the nifHDK Operon in N₂ Fixation and Nitrogenase “Switch-Off” of Azoarcus sp. Strain BH72

Tanja Egener, Dietmar E. Martin, Abhijit Sarkar, Barbara Reinhold-Hurek

J Bacteriol. 2001 Jun; 183(12): 3752–3760. doi: 10.1128/JB.183.12.3752-3760.2001

PMCID:: PMC95253

Abstract Article PDF–879K

Select item 9294012.

Burkholderia, a Genus Rich in Plant-Associated Nitrogen Fixers with Wide Environmental and Geographic Distribution

Paulina Estrada-De Los Santos, Rocío Bustillos-Cristales, Jesús Caballero-Mellado

Appl Environ Microbiol. 2001 Jun; 67(6): 2790–2798. doi: 10.1128/AEM.67.6.2790-2798.2001

PMCID:: PMC92940

Abstract Article PDF–501K

Select item 10640713.

Isolation and Characterization of Phenol-Degrading Denitrifying Bacteria

Paula M. van Schie, L. Y. Young

Appl Environ Microbiol. 1998 Jul; 64(7): 2432–2438. doi: 10.1128/aem.64.7.2432-2438.1998

PMCID:: PMC106407

Abstract Article PDF–234K

Select item 1105961314.

Characterization of a novel root-associated diazotrophic rare PGPR taxa, Aquabacter pokkalii sp. nov., isolated from pokkali rice: new insights into the plant-associated lifestyle and brackish adaptation

V. S. Sunithakumari, Rahul R. Menon, Gayathri G. Suresh, Ramya Krishnan, N. Rameshkumar

BMC Genomics. 2024; 25: 424. Published online 2024 Apr 29. doi: 10.1186/s12864-024-10332-z

PMCID:: PMC11059613

Abstract Article PDF–3.9M

Select item 1060286615.

Golden Standard: a complete standard, portable, and interoperative MoClo tool for model and non-model proteobacteria

Blas Blázquez, David San León, Jesús Torres-Bacete, Álvaro Gómez-Luengo, Ryan Kniewel, Igor Martínez, Sandra Sordon, Aleksandra Wilczak, Sergio Salgado, Ewa Huszcza, Jarosław Popłoński, Auxiliadora Prieto, Juan Nogales

Nucleic Acids Res. 2023 Oct 27; 51(19): e98. Published online 2023 Sep 18. doi: 10.1093/nar/gkad758