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Items: 1 to 20 of 86

1.
Extremophilic microbial metabolism and radioactive waste disposal
Sarah Jane Butterworth, Franky Barton, Jonathan Richard Lloyd
Extremophiles. 2023; 27(3): 27. Published online 2023 Oct 15. doi: 10.1007/s00792-023-01312-4
PMCID:
PMC10577106
AbstractArticlePDF–679K
2.
Microbiome and metagenomic analysis of Lake Hillier Australia reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations
Maria A. Sierra, Krista A. Ryon, Braden T. Tierney, Jonathan Foox, Chandrima Bhattacharya, Evan Afshin, Daniel Butler, Stefan J. Green, W. Kelley Thomas, Jordan Ramsdell, Nathan J. Bivens, Ken McGrath, Christopher E. Mason, Scott W. Tighe
Environ Microbiome. 2022; 17: 60. Published online 2022 Dec 21. doi: 10.1186/s40793-022-00455-9
PMCID:
PMC9768965
AbstractArticlePDF–9.7M
3.
Sequence Conservation, Domain Architectures, and Phylogenetic Distribution of the HD-GYP Type c-di-GMP Phosphodiesterases
Michael Y. Galperin, Shan-Ho Chou
J Bacteriol. 2022 Apr; 204(4): e00561-21. Prepublished online 2021 Dec 20. Published online 2022 Mar 22. doi: 10.1128/jb.00561-21
PMCID:
PMC9017333
AbstractArticlePDF–2.9M
4.
Distinct Expansion of Group II Introns During Evolution of Prokaryotes and Possible Factors Involved in Its Regulation
Masahiro C. Miura, Shohei Nagata, Satoshi Tamaki, Masaru Tomita, Akio Kanai
Front Microbiol. 2022; 13: 849080. Published online 2022 Feb 28. doi: 10.3389/fmicb.2022.849080
PMCID:
PMC8919778
AbstractArticlePDF–5.5M
5.
The IS6 family, a clinically important group of insertion sequences including IS26
Alessandro Varani, Susu He, Patricia Siguier, Karen Ross, Michael Chandler
Mob DNA. 2021; 12: 11. Published online 2021 Mar 23. doi: 10.1186/s13100-021-00239-x
PMCID:
PMC7986276
AbstractArticlePDF–2.4M
6.
Distribution and preservation of the components of the engulfment. What is beyond representative genomes?
Lizeth Soto-Avila, Ricardo Ciria Merce, Walter Santos, Nori Castañeda, Rosa-María Gutierrez-Ríos
PLoS One. 2021; 16(3): e0246651. Published online 2021 Mar 2. doi: 10.1371/journal.pone.0246651
PMCID:
PMC7924749
AbstractArticlePDF–4.3M
7.
A dynamic, ring-forming MucB / RseB-like protein influences spore shape in Bacillus subtilis
Johana Luhur, Helena Chan, Benson Kachappilly, Ahmed Mohamed, Cécile Morlot, Milena Awad, Dena Lyras, Najwa Taib, Simonetta Gribaldo, David Z. Rudner, Christopher D. A. Rodrigues
PLoS Genet. 2020 Dec; 16(12): e1009246. Published online 2020 Dec 14. doi: 10.1371/journal.pgen.1009246
PMCID:
PMC7769602
AbstractArticlePDF–4.5M
8.
RNA 3D structure prediction guided by independent folding of homologous sequences
Marcin Magnus, Kalli Kappel, Rhiju Das, Janusz M. Bujnicki
BMC Bioinformatics. 2019; 20: 512. Published online 2019 Oct 22. doi: 10.1186/s12859-019-3120-y
PMCID:
PMC6806525
AbstractArticlePDF–2.3M
9.
A Novel Subfamily of Bacterial AAT-Fold Basic Amino Acid Decarboxylases and Functional Characterization of Its First Representative: Pseudomonas aeruginosa LdcA
Diego Carriel, Pierre Simon Garcia, Florence Castelli, Patricia Lamourette, François Fenaille, Céline Brochier-Armanet, Sylvie Elsen, Irina Gutsche
Genome Biol Evol. 2018 Nov; 10(11): 3058–3075. Published online 2018 Oct 13. doi: 10.1093/gbe/evy228
PMCID:
PMC6257575
AbstractArticlePDF–1.4M
10.
Origin and Evolution of Flavin-Based Electron Bifurcating Enzymes
Saroj Poudel, Eric C. Dunham, Melody R. Lindsay, Maximiliano J. Amenabar, Elizabeth M. Fones, Daniel R. Colman, Eric S. Boyd
Front Microbiol. 2018; 9: 1762. Published online 2018 Aug 3. doi: 10.3389/fmicb.2018.01762
PMCID:
PMC6085437
AbstractArticlePDF–3.4M
11.
Composition and Activity of Microbial Communities along the Redox Gradient of an Alkaline, Hypersaline, Lake
Christian F. Edwardson, James T. Hollibaugh
Front Microbiol. 2018; 9: 14. Published online 2018 Jan 31. doi: 10.3389/fmicb.2018.00014
PMCID:
PMC5797777
AbstractArticlePDF–15M
12.
Mrp Antiporters Have Important Roles in Diverse Bacteria and Archaea
Masahiro Ito, Masato Morino, Terry A. Krulwich
Front Microbiol. 2017; 8: 2325. Published online 2017 Nov 23. doi: 10.3389/fmicb.2017.02325
PMCID:
PMC5703873
AbstractArticlePDF–3.1M
13.
Draft Genome Sequence of Natranaerobius trueperi DSM 18760T, an Anaerobic, Halophilic, Alkaliphilic, Thermotolerant Bacterium Isolated from a Soda Lake
Xiaomeng Guo, Ziya Liao, Mark Holtzapple, Qingping Hu, Baisuo Zhao
Genome Announc. 2017 Sep; 5(36): e00785-17. Published online 2017 Sep 7. doi: 10.1128/genomeA.00785-17
PMCID:
PMC5589526
AbstractArticlePDF–121K
14.
Metatranscriptomic analysis of prokaryotic communities active in sulfur and arsenic cycling in Mono Lake, California, USA
Christian F Edwardson, James T Hollibaugh
ISME J. 2017 Oct; 11(10): 2195–2208. Published online 2017 May 26. doi: 10.1038/ismej.2017.80
PMCID:
PMC5607362
AbstractArticlePDF–1.3M
15.
The putative drug efflux systems of the Bacillus cereus group
Karl A. Hassan, Annette Fagerlund, Liam D. H. Elbourne, Aniko Vörös, Jasmin K. Kroeger, Roger Simm, Nicolas J. Tourasse, Sarah Finke, Peter J. F. Henderson, Ole Andreas Økstad, Ian T. Paulsen, Anne-Brit Kolstø
PLoS One. 2017; 12(5): e0176188. Published online 2017 May 4. doi: 10.1371/journal.pone.0176188
PMCID:
PMC5417439
AbstractArticlePDF–3.6M
16.
Functional Role of MrpA in the MrpABCDEFG Na+/H+ Antiporter Complex from the Archaeon Methanosarcina acetivorans
Ricardo Jasso-Chávez, César Diaz-Perez, José S. Rodríguez-Zavala, James G. Ferry
J Bacteriol. 2017 Jan 15; 199(2): e00662-16. Prepublished online 2016 Oct 31. Published online 2016 Dec 28. doi: 10.1128/JB.00662-16
PMCID:
PMC5198491
AbstractArticlePDF–1.3M
17.
Evolutionary Adaptation of the Essential tRNA Methyltransferase TrmD to the Signaling Molecule 3′,5′-cAMP in Bacteria
Yong Zhang, Rym Agrebi, Lauren E. Bellows, Jean-François Collet, Volkhard Kaever, Angelika Gründling
J Biol Chem. 2017 Jan 6; 292(1): 313–327. Published online 2016 Nov 23. doi: 10.1074/jbc.M116.758896
PMCID:
PMC5217690
AbstractArticlePDF–2.3M
18.
Metagenomic and PCR-Based Diversity Surveys of [FeFe]-Hydrogenases Combined with Isolation of Alkaliphilic Hydrogen-Producing Bacteria from the Serpentinite-Hosted Prony Hydrothermal Field, New Caledonia
Nan Mei, Anne Postec, Christophe Monnin, Bernard Pelletier, Claude E. Payri, Bénédicte Ménez, Eléonore Frouin, Bernard Ollivier, Gaël Erauso, Marianne Quéméneur
Front Microbiol. 2016; 7: 1301. Published online 2016 Aug 30. doi: 10.3389/fmicb.2016.01301
PMCID:
PMC5003875
AbstractArticlePDF–2.5M
19.
Phylogeny Reconstruction with Alignment-Free Method That Corrects for Horizontal Gene Transfer
Raquel Bromberg, Nick V. Grishin, Zbyszek Otwinowski
PLoS Comput Biol. 2016 Jun; 12(6): e1004985. Published online 2016 Jun 23. doi: 10.1371/journal.pcbi.1004985
PMCID:
PMC4918981
AbstractArticlePDF–1.6M
20.
Differences in Physical and Biochemical Properties of Thermus scotoductus SA-01 Cultured with Dielectric or Convection Heating
Allison L. Cockrell, Lisa A. Fitzgerald, Kathleen D. Cusick, Daniel E. Barlow, Stanislav D. Tsoi, Carissa M. Soto, Jeffrey W. Baldwin, Jason R. Dale, Robert E. Morris, Brenda J. Little, Justin C. Biffinger
Appl Environ Microbiol. 2015 Sep; 81(18): 6285–6293. Prepublished online 2015 Jul 6. Published online 2015 Aug 19. doi: 10.1128/AEM.01618-15
PMCID:
PMC4542235
AbstractArticlePDF–1.2M

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